RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SEMA4GQ9NTN9 838 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 SYNJ2O15056 1496 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 MYADML2A6NDP7 307 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 C1QL1O75973 258 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 AGFG2O95081 481 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 POU3F3P20264 500 aaPredicted RBP5.45□□□□□ -1.54
UBR3-209ENST00000477461 AGXTP21549 392 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 CACNA2D1P54289 1103 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 CD300EQ496F6 205 aaPredicted RBP5.45□□□□□ -1.54
UBR3-209ENST00000477461 UTP14CQ5TAP6 766 aaKnown RBP5.45□□□□□ -1.54
UBR3-209ENST00000477461 RSPH3Q86UC2 560 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 AMOTL1Q8IY63 956 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 Q8NA96 180 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 C11orf54Q9H0W9 315 aaPredicted RBP5.45□□□□□ -1.54
UBR3-209ENST00000477461 VSX1Q9NZR4 365 aaPredicted RBP5.45□□□□□ -1.54
UBR3-209ENST00000477461 CDYLQ9Y232 598 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 CHD1O14646 1710 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 GOLGA3Q08378 1498 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 PRXQ9BXM0 1461 aa5.45□□□□□ -1.54
UBR3-209ENST00000477461 GRM6O15303 877 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 YY2O15391 372 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 GATA3P23771 443 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 FPGSQ05932 587 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 TARDBPQ13148 414 aaKnown RBP eCLIP5.44□□□□□ -1.54
UBR3-209ENST00000477461 KLF1Q13351 362 aaPredicted RBP5.44□□□□□ -1.54
UBR3-209ENST00000477461 ACAP2Q15057 778 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 RNF219Q5W0B1 726 aaPredicted RBP5.44□□□□□ -1.54
UBR3-209ENST00000477461 LNX2Q8N448 690 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.44□□□□□ -1.54
UBR3-209ENST00000477461 SLC30A5Q8TAD4 765 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 TFAP2BQ92481 460 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 FRMD4BQ9Y2L6 1034 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 GRIN2AQ12879 1464 aa5.44□□□□□ -1.54
UBR3-209ENST00000477461 ZNF280AP59817 542 aaPredicted RBP5.43□□□□□ -1.54
UBR3-209ENST00000477461 CTXN1P60606 82 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 KAZNQ674X7 775 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 CNTD1Q8N815 330 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 TOR1AIP2Q8NFQ8 470 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 FBXO41Q8TF61 875 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 FBXL20Q96IG2 436 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 MED15Q96RN5 788 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 HEPHQ9BQS7 1158 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 CPNE5Q9HCH3 593 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 ZNF277Q9NRM2 450 aaPredicted RBP5.43□□□□□ -1.54
UBR3-209ENST00000477461 TDP1Q9NUW8 608 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 SLC17A6Q9P2U8 582 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 SLC45A2Q9UMX9 530 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 CTTNBP2Q8WZ74 1663 aa5.43□□□□□ -1.54
UBR3-209ENST00000477461 RBMXL2O75526 392 aaKnown RBP5.42□□□□□ -1.54
UBR3-209ENST00000477461 CDK4P11802 303 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 FOLR3P41439 243 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 ABCG1P45844 678 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 IL10RAQ13651 578 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 ATP2B3Q16720 1220 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 DACT2Q5SW24 774 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 NLGN4YQ8NFZ3 816 aaPredicted RBP5.42□□□□□ -1.54
UBR3-209ENST00000477461 ZCRB1Q8TBF4 217 aaKnown RBP5.42□□□□□ -1.54
UBR3-209ENST00000477461 LPIN2Q92539 896 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 JADE3Q92613 823 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 ST3GAL5Q9UNP4 418 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 PHLDB1Q86UU1 1377 aa5.42□□□□□ -1.54
UBR3-209ENST00000477461 NDUFS2O75306 463 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 HAUS5O94927 633 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 MT-CO1P00395 513 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 CHRM2P08172 466 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 IARSP41252 1262 aaKnown RBP5.41□□□□□ -1.54
UBR3-209ENST00000477461 FLYWCH1Q4VC44 716 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 TSTD2Q5T7W7 516 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 VWA1Q6PCB0 445 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 SLC17A8Q8NDX2 589 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 IMPG2Q9BZV3 1241 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 MKS1Q9NXB0 559 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 SLC5A4Q9NY91 659 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 MCM8Q9UJA3 840 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 TUBD1Q9UJT1 453 aa5.41□□□□□ -1.54
UBR3-209ENST00000477461 PRAMEF33A0A0G2JMD5 474 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 PRAMEF10O60809 474 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 ELFN1P0C7U0 828 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 MTHFD1P11586 935 aaKnown RBP5.4□□□□□ -1.54
UBR3-209ENST00000477461 C5AR1P21730 350 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 MAPK10P53779 464 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 AMPD3Q01432 767 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 CLNKQ7Z7G1 428 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 PEG10Q86TG7 708 aaKnown RBP5.4□□□□□ -1.54
UBR3-209ENST00000477461 GLCCI1Q86VQ1 547 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 DDX42Q86XP3 938 aaKnown RBP eCLIP5.4□□□□□ -1.54
UBR3-209ENST00000477461 LRIG1Q96JA1 1093 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 KLHL32Q96NJ5 620 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 INTS13Q9NVM9 706 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 SAP30BPQ9UHR5 308 aaKnown RBP5.4□□□□□ -1.54
UBR3-209ENST00000477461 LIMCH1Q9UPQ0 1083 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 ATP8A1Q9Y2Q0 1164 aa5.4□□□□□ -1.54
UBR3-209ENST00000477461 TNIKQ9UKE5 1360 aa5.4□□□□□ -1.55
UBR3-209ENST00000477461 IQGAP2Q13576 1575 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 CEP170Q5SW79 1584 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 A0A1W2PS29 197 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 ANKRD62A6NC57 917 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 TOR1BO14657 336 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 KCNA2P16389 499 aa5.39□□□□□ -1.55
UBR3-209ENST00000477461 NCLP19338 710 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms