RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 PACSIN2Q9UNF0 486 aaPredicted RBP19.39■□□□□ 0.69
SMC4-211ENST00000469858 BRCA2P51587 3418 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 ATMINO43313 823 aaPredicted RBP19.38■□□□□ 0.69
SMC4-211ENST00000469858 RPS6KA5O75582 802 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 GRK4P32298 578 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 SSTR3P32745 418 aaPredicted RBP19.38■□□□□ 0.69
SMC4-211ENST00000469858 THPOP40225 353 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 GPC5P78333 572 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 NFX1Q12986 1120 aaKnown RBP19.38■□□□□ 0.69
SMC4-211ENST00000469858 PTPROQ16827 1216 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 MEI1Q5TIA1 1274 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 ACAD10Q6JQN1 1059 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 UBXN4Q92575 508 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 HPDLQ96IR7 371 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 OSBPL9Q96SU4 736 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 RNF19AQ9NV58 838 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 SAGE1Q9NXZ1 904 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 PARP2Q9UGN5 583 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 TSKSQ9UJT2 592 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 DERAQ9Y315 318 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 SCN1AP35498 2009 aa19.38■□□□□ 0.69
SMC4-211ENST00000469858 CABYRO75952 493 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 CFHP08603 1231 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 CXCR5P32302 372 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 YWHAEP62258 255 aaKnown RBP19.37■□□□□ 0.69
SMC4-211ENST00000469858 RBP5P82980 135 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 DAAM2Q86T65 1068 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 PASD1Q8IV76 773 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 RHOT2Q8IXI1 618 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 BCO2Q9BYV7 579 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 SMYD3Q9H7B4 428 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 KLK14Q9P0G3 267 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 CNTN3Q9P232 1028 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 CTTNBP2NLQ9P2B4 639 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 ST3GAL5Q9UNP4 418 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 NOD1Q9Y239 953 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 IPPQ9Y573 584 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 RPLP2P05387 115 aaKnown RBP19.37■□□□□ 0.69
SMC4-211ENST00000469858 UNGP13051 313 aaPredicted RBP19.37■□□□□ 0.69
SMC4-211ENST00000469858 TCP1P17987 556 aaKnown RBP19.37■□□□□ 0.69
SMC4-211ENST00000469858 CDH8P55286 799 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 MGAT3Q09327 533 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 TEX35Q5T0J7 233 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 NAA35Q5VZE5 725 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 RPAINQ86UA6 219 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 COG1Q8WTW3 980 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 CPA5Q8WXQ8 436 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 ZNF653Q96CK0 615 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 VRTNQ9H8Y1 702 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 TRMT13Q9NUP7 481 aaKnown RBP19.37■□□□□ 0.69
SMC4-211ENST00000469858 TUBGCP4Q9UGJ1 667 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 CHORDC1Q9UHD1 332 aaPredicted RBP19.37■□□□□ 0.69
SMC4-211ENST00000469858 COG5Q9UP83 839 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 TRIM17Q9Y577 477 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 PTCH2Q9Y6C5 1203 aa19.37■□□□□ 0.69
SMC4-211ENST00000469858 CTAGE15A4D2H0 777 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 CTAGE8P0CG41 777 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 PRLRP16471 622 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 ALKAL1Q6UXT8 129 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 CTAGE6Q86UF2 777 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 CTAGE4Q8IX94 777 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 SYCE1Q8N0S2 351 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 SMG8Q8ND04 991 aaKnown RBP19.36■□□□□ 0.69
SMC4-211ENST00000469858 CAGE1Q8TC20 777 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 C18orf25Q96B23 403 aaPredicted RBP19.36■□□□□ 0.69
SMC4-211ENST00000469858 CYFIP2Q96F07 1278 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 GLT1D1Q96MS3 346 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 SDCBP2Q9H190 292 aa19.36■□□□□ 0.69
SMC4-211ENST00000469858 BUB1BO60566 1050 aaPredicted RBP19.35■□□□□ 0.69
SMC4-211ENST00000469858 CYP1A1P04798 512 aaPredicted RBP19.35■□□□□ 0.69
SMC4-211ENST00000469858 P4HA1P13674 534 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 BRD2P25440 801 aaKnown RBP19.35■□□□□ 0.69
SMC4-211ENST00000469858 PRMT2P55345 433 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 ZBTB6Q15916 424 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 LHX8Q68G74 356 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 BEST2Q8NFU1 509 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 ZNF606Q8WXB4 792 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 GOLGA1Q92805 767 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 FAXDC2Q96IV6 333 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 MOXD2PA6NHM9 499 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 NSFP46459 744 aaKnown RBP19.35■□□□□ 0.69
SMC4-211ENST00000469858 CKAP4Q07065 602 aaKnown RBP19.35■□□□□ 0.69
SMC4-211ENST00000469858 TRIM72Q6ZMU5 477 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 RSRC2Q7L4I2 434 aaKnown RBP19.35■□□□□ 0.69
SMC4-211ENST00000469858 PEX26Q7Z412 305 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 SLFN11Q7Z7L1 901 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 MMS19Q96T76 1030 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 GTF3C4Q9UKN8 822 aa19.35■□□□□ 0.69
SMC4-211ENST00000469858 TNNC1P63316 161 aa19.34■□□□□ 0.69
SMC4-211ENST00000469858 CENPCQ03188 943 aa19.34■□□□□ 0.69
SMC4-211ENST00000469858 MYO1EQ12965 1108 aa19.34■□□□□ 0.69
SMC4-211ENST00000469858 UBQLN1Q9UMX0 589 aaKnown RBP19.34■□□□□ 0.69
SMC4-211ENST00000469858 SMIM28A0A1B0GU29 152 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 PPEF2O14830 753 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 STAU1O95793 577 aaKnown RBP19.33■□□□□ 0.69
SMC4-211ENST00000469858 CYP1A2P05177 515 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 HADHBP55084 474 aaKnown RBP19.33■□□□□ 0.69
SMC4-211ENST00000469858 NOMO3P69849 1222 aa19.33■□□□□ 0.69
SMC4-211ENST00000469858 PTK7Q13308 1070 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms