RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 KCNH3Q9ULD8 1083 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 MYO10Q9HD67 2058 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 LACTBL1A8MY62 500 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 PI4K2BG5E9Z4 385 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 PODXLO00592 558 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 TGM5O43548 720 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 TRAPPC3O43617 180 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 TBC1D4O60343 1298 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 GCNT3O95395 438 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 SLFN14P0C7P3 912 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 MYBP10242 640 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 MATR3P43243 847 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL4A6-205ENST00000468338 MRPL58Q14197 206 aaKnown RBP12.12□□□□□ -0.47
COL4A6-205ENST00000468338 PDXDC1Q6P996 788 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 PRSS55Q6UWB4 352 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-205ENST00000468338 EPM2AIP1Q7L775 607 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-205ENST00000468338 GPR149Q86SP6 731 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 C12orf76Q8N812 135 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-205ENST00000468338 FEZF2Q8TBJ5 459 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 SPATA32Q96LK8 384 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 NECTIN4Q96NY8 510 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 ACCSQ96QU6 501 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 SCAND2PQ9GZW5 306 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-205ENST00000468338 PLEKHA4Q9H4M7 779 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 ASB7Q9H672 318 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 SFXN1Q9H9B4 322 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 RPF1Q9H9Y2 349 aaKnown RBP12.12□□□□□ -0.47
COL4A6-205ENST00000468338 TUBGCP4Q9UGJ1 667 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 DPP7Q9UHL4 492 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 AGO2Q9UKV8 859 aaKnown RBP12.12□□□□□ -0.47
COL4A6-205ENST00000468338 UBQLN1Q9UMX0 589 aaKnown RBP12.12□□□□□ -0.47
COL4A6-205ENST00000468338 EXOC7Q9UPT5 735 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 BACE2Q9Y5Z0 518 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 C2orf16Q68DN1 1984 aa12.12□□□□□ -0.47
COL4A6-205ENST00000468338 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 PVALEFA0A1B0GWK0 134 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 A0A1W2PQ27 194 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 A0A1W2PQ64 194 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 A0A1W2PQD8 194 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 SYN3O14994 580 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 GLUD1P00367 558 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 RPL17P18621 184 aaKnown RBP12.11□□□□□ -0.47
COL4A6-205ENST00000468338 GARTP22102 1010 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 HOXD13P35453 343 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 MTHFRP42898 656 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 BRCC3P46736 316 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL4A6-205ENST00000468338 ACOT2P49753 483 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 PPP2R3AQ06190 1150 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 RAB33AQ14088 237 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 PSMD5Q16401 504 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 SPATA1Q5VX52 437 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 CES5AQ6NT32 575 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 CYP26C1Q6V0L0 522 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 C15orf39Q6ZRI6 1047 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 GLIS3Q8NEA6 775 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 ZNF592Q92610 1267 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 SUSD3Q96L08 255 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 TMEM206Q9H813 350 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 MAN1C1Q9NR34 630 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 MTRRQ9UBK8 725 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 USP25Q9UHP3 1055 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 CDH22Q9UJ99 828 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 DERAQ9Y315 318 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 C2CD2Q9Y426 696 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 SCN1AP35498 2009 aa12.11□□□□□ -0.47
COL4A6-205ENST00000468338 DENND4AQ7Z401 1863 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 ANO9A1A5B4 782 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 EIF3DO15371 548 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL4A6-205ENST00000468338 ADAM12O43184 909 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 XPOTO43592 962 aaKnown RBP12.1□□□□□ -0.47
COL4A6-205ENST00000468338 KLRC4O43908 158 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 PRPF6O94906 941 aaKnown RBP12.1□□□□□ -0.47
COL4A6-205ENST00000468338 PFKFB1P16118 471 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 TKTP29401 623 aaKnown RBP12.1□□□□□ -0.47
COL4A6-205ENST00000468338 ASIC1P78348 528 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 NUCB2P80303 420 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 SPAG1Q07617 926 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 FAM26FQ5R3K3 315 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 RARS2Q5T160 578 aaKnown RBP12.1□□□□□ -0.47
COL4A6-205ENST00000468338 TMC5Q6UXY8 1006 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 ANKS3Q6ZW76 656 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 CEP57Q86XR8 500 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 SCUBE3Q8IX30 993 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 TMEM130Q8N3G9 435 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 POMGNT1Q8WZA1 660 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 HPS3Q969F9 1004 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 MARVELD3Q96A59 401 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 PAGE5Q96GU1 130 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 RIPOR3Q96MK2 946 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 APOL5Q9BWW9 433 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 POMKQ9H5K3 350 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 EPHX3Q9H6B9 360 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 SERTAD1Q9UHV2 236 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 FBXW11Q9UKB1 542 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms