RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 ASGR1P07306 291 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 ZSCAN20P17040 1043 aaPredicted RBP22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 CD58P19256 250 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 CST5P28325 142 aaPredicted RBP22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 MAP3K21Q5TCX8 1036 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 GDF6Q6KF10 455 aaPredicted RBP22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 SCARA5Q6ZMJ2 495 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 NT5DC3Q86UY8 548 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 SNX27Q96L92 541 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 BCO2Q9BYV7 579 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 CELF4Q9BZC1 486 aaKnown RBP22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 ABCB6Q9NP58 842 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 RNF14Q9UBS8 474 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 NXF1Q9UBU9 619 aaKnown RBP22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 DERAQ9Y315 318 aa22.58■■□□□ 1.2
PPP1R3F-203ENST00000466508 CYP1A2P05177 515 aa22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 WEE2P0C1S8 567 aa22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 YARSP54577 528 aaKnown RBP22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 CENPCQ03188 943 aa22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 WDR72Q3MJ13 1102 aa22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 NOA1Q8NC60 698 aaKnown RBP22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 ZNF653Q96CK0 615 aa22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 KIF12Q96FN5 646 aa22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 PDCL3Q9H2J4 239 aa22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 STXBP5LQ9Y2K9 1186 aa22.57■■□□□ 1.2
PPP1R3F-203ENST00000466508 CES2O00748 559 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 THAP12O43422 761 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 POLR2BP30876 1174 aaKnown RBP22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 DNA2P51530 1060 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 MRPS6P82932 125 aaKnown RBP22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 ITIH3Q06033 890 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 KCNA10Q16322 511 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 FAM47CQ5HY64 1035 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 CCDC181Q5TID7 509 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 CCSAPQ6IQ19 270 aaPredicted RBP22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 SESTD1Q86VW0 696 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 NXF3Q9H4D5 531 aaKnown RBP22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 DPP3Q9NY33 737 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 POLIQ9UNA4 740 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 BRCA2P51587 3418 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 M0QZ92 97 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 ATMINO43313 823 aaPredicted RBP22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 FKTNO75072 461 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 C11orf63Q6NUN7 778 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 RSPH3Q86UC2 560 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 SERINC5Q86VE9 423 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 TMEM130Q8N3G9 435 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 EPC1Q9H2F5 836 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 UVRAGQ9P2Y5 699 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 HES2Q9Y543 173 aa22.56■■□□□ 1.2
PPP1R3F-203ENST00000466508 SCN1AP35498 2009 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 STAU1O95793 577 aaKnown RBP22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 GNRH1P01148 92 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 RPLP2P05387 115 aaKnown RBP22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 H2AFXP16104 143 aaPredicted RBP22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 PAFAH1B1P43034 410 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 NSFP46459 744 aaKnown RBP22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 NAA35Q5VZE5 725 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 FBXO38Q6PIJ6 1188 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 ZNF606Q8WXB4 792 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 CYFIP2Q96F07 1278 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 TRIM11Q96F44 468 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 HES6Q96HZ4 224 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 HPDLQ96IR7 371 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 AMFRQ9UKV5 643 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 AGAP1Q9UPQ3 857 aa22.55■■□□□ 1.2
PPP1R3F-203ENST00000466508 RECQL4O94761 1208 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 MYBL1P10243 752 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 P4HA1P13674 534 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 GUCY2FP51841 1108 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 NOMO3P69849 1222 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 RBP5P82980 135 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 CFAP221Q4G0U5 840 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 FAM228AQ86W67 206 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 MCOLN2Q8IZK6 566 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 PDCL2Q8N4E4 241 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 PCSK9Q8NBP7 692 aaKnown RBP22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 CPA5Q8WXQ8 436 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 NUP85Q9BW27 656 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 CNTN3Q9P232 1028 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 TRPV2Q9Y5S1 764 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 CDY2AQ9Y6F7 541 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 KCNK3O14649 394 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 MYCNP04198 464 aaPredicted RBP22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 CFHP08603 1231 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 PTPROQ16827 1216 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 ZNF394Q53GI3 561 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 UBXN11Q5T124 520 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 PPP1R2P3Q6NXS1 205 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 ALKAL1Q6UXT8 129 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 RPAINQ86UA6 219 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 PASD1Q8IV76 773 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 ZNF564Q8TBZ8 553 aaPredicted RBP22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 RAET1EQ8TD07 263 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 PXYLP1Q8TE99 480 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 ZMAT2Q96NC0 199 aaKnown RBP22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 ANKZF1Q9H8Y5 726 aa22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 AVENQ9NQS1 362 aaPredicted RBP22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 CNOT8Q9UFF9 292 aaKnown RBP22.54■■□□□ 1.2
PPP1R3F-203ENST00000466508 DDX20Q9UHI6 824 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms