RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CAV1Q03135 178 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 KPNB1Q14974 876 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 RCN1Q15293 331 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 ABCB5Q2M3G0 1257 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 NBPF20Q3BBV1 942 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 CRY2Q49AN0 593 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 CLNKQ7Z7G1 428 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 FBXO6Q9NRD1 293 aaPredicted RBP13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 C2CD2Q9Y426 696 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 ACTL7BQ9Y614 415 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 MARK3P27448 753 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 CRKP46108 304 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 PAPOLAP51003 745 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 KLC1Q07866 573 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 GPS1Q13098 491 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 ZYXQ15942 572 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 CCDC6Q16204 474 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 CTC1Q2NKJ3 1217 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 C4orf50Q6ZRC1 276 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 C11orf70Q9BRQ4 267 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 ZC3H12CQ9C0D7 883 aaKnown RBP13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 ZNF148Q9UQR1 794 aa13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLCNKA-204ENST00000464764 P4HA2O15460 535 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 UNGP13051 313 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 PTPN4P29074 926 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 ACSBG2Q5FVE4 666 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 PPP1R15BQ5SWA1 713 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 SNX30Q5VWJ9 437 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 KRT39Q6A163 491 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 SYDE1Q6ZW31 735 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 ZCCHC9Q8N567 271 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 ACER1Q8TDN7 264 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 WDR60Q8WVS4 1066 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 PTPRN2Q92932 1015 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 TMEM206Q9H813 350 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 RAB20Q9NX57 234 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 ZHX2Q9Y6X8 837 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 NVLO15381 856 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 TYROBPO43914 113 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 IFNB1P01574 187 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 FESP07332 822 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 NEFHP12036 1026 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 ATF7P17544 494 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 CALRP27797 417 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 ARSEP51690 589 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 RCN2Q14257 317 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 CCNG2Q16589 344 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 SV2AQ7L0J3 742 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 LRRC6Q86X45 466 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 RBBP8NLQ8NC74 664 aaPredicted RBP13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 SCG3Q8WXD2 468 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 ZNF333Q96JL9 665 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 CFAP57Q96MR6 1250 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 NT5C1BQ96P26 610 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 DDX50Q9BQ39 737 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 WDR11Q9BZH6 1224 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 DBNDD1Q9H9R9 158 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 CYLDQ9NQC7 956 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 SLC17A7Q9P2U7 560 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 PI4KBQ9UBF8 816 aa13.32□□□□□ -0.28
CLCNKA-204ENST00000464764 UMODL1Q5DID0 1318 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 A0A1B0GVG6 124 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 RGL2O15211 777 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 ZBED4O75132 1171 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 BBOX1O75936 387 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 POLR2MP0CAP2 368 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 ITGB5P18084 799 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 MUTP22033 750 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 SSTR1P30872 391 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 DSG3P32926 999 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 WASHC2DQ5SRD0 308 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 FOXB2Q5VYV0 432 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 SPOPLQ6IQ16 392 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 TTC7BQ86TV6 843 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 FAM136AQ96C01 138 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 TEKT3Q9BXF9 490 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 SAE1Q9UBE0 346 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 HEY2Q9UBP5 337 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 ADAMTSL1Q8N6G6 1762 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 MYPNQ86TC9 1320 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 SIGLEC16A6NMB1 481 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 PIK3CDO00329 1044 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 PRPF4O43172 522 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 TBX10O75333 385 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 SNUPNO95149 360 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 RARRES1P49788 294 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 MRPS35P82673 323 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 SPP2Q13103 211 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 PLA2G4FQ68DD2 849 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 MIER3Q7Z3K6 550 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 DCLRE1BQ9H816 532 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 CAPN9O14815 690 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 MAN1A1P33908 653 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 CPA2P48052 419 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 POLE2P56282 527 aa13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 PDIA2Q13087 525 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-204ENST00000464764 NR1H3Q13133 447 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms