RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SHC2P98077 582 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 FCHO2Q0JRZ9 810 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 PLD1Q13393 1074 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 SF3A2Q15428 464 aaKnown RBP15.83■□□□□ 0.12
SMC1A-204ENST00000463684 CACNA2D4Q7Z3S7 1137 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 SYNPOQ8N3V7 929 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 TTC8Q8TAM2 541 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 SHKBP1Q8TBC3 707 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 LOXL4Q96JB6 756 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 TBC1D32Q96NH3 1257 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 MRPL4Q9BYD3 311 aaKnown RBP15.83■□□□□ 0.12
SMC1A-204ENST00000463684 MCF2P10911 925 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 CTHP32929 405 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 ALDH1A3P47895 512 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 PON2Q15165 354 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 ANKRD1Q15327 319 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 ARHGAP29Q52LW3 1261 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 GPIHBP1Q8IV16 184 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 ARID3BQ8IVW6 561 aaPredicted RBP15.82■□□□□ 0.12
SMC1A-204ENST00000463684 C18orf25Q96B23 403 aaPredicted RBP15.82■□□□□ 0.12
SMC1A-204ENST00000463684 RSPRY1Q96DX4 576 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 OXCT2Q9BYC2 517 aaPredicted RBP15.82■□□□□ 0.12
SMC1A-204ENST00000463684 PTPRHQ9HD43 1115 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 CNTN3Q9P232 1028 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 PCDHB8Q9UN66 801 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 YIPF1Q9Y548 306 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 NCANO14594 1321 aa15.82■□□□□ 0.12
SMC1A-204ENST00000463684 TM4SF5O14894 197 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 PEX3P56589 373 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 YWHAHQ04917 246 aaPredicted RBP15.81■□□□□ 0.12
SMC1A-204ENST00000463684 CCDC6Q16204 474 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 STPG1Q5TH74 334 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 HAUS3Q68CZ6 603 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 TXNDC11Q6PKC3 985 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 PHLPP2Q6ZVD8 1323 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 GAB3Q8WWW8 586 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 BHMT2Q9H2M3 363 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 TMEM134Q9H6X4 195 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 C2orf42Q9NWW7 574 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 GTSE1Q9NYZ3 720 aa15.81■□□□□ 0.12
SMC1A-204ENST00000463684 TICRRQ7Z2Z1 1910 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 CHD8Q9HCK8 2581 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 RPP40O75818 363 aaKnown RBP15.8■□□□□ 0.12
SMC1A-204ENST00000463684 FGF19O95750 216 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 CCDC192P0DO97 292 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 CCT6AP40227 531 aaKnown RBP15.8■□□□□ 0.12
SMC1A-204ENST00000463684 NPTX2P47972 431 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 FOSBP53539 338 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 CCINQ13939 588 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 PTPAQ15257 358 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 ARHGAP15Q53QZ3 475 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 WDR44Q5JSH3 913 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 MPZL3Q6UWV2 235 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 USP37Q86T82 979 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 BEST2Q8NFU1 509 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 ZFYVE19Q96K21 471 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 PGLYRP2Q96PD5 576 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 TARS2Q9BW92 718 aaKnown RBP15.8■□□□□ 0.12
SMC1A-204ENST00000463684 LRRC3Q9BY71 257 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 ATXN3LQ9H3M9 355 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 OBP2AQ9NY56 170 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 RBM19Q9Y4C8 960 aaKnown RBP15.8■□□□□ 0.12
SMC1A-204ENST00000463684 ASB3Q9Y575 518 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 MAP1BP46821 2468 aaKnown RBP15.8■□□□□ 0.12
SMC1A-204ENST00000463684 F5P12259 2224 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 COL4A2P08572 1712 aa15.8■□□□□ 0.12
SMC1A-204ENST00000463684 CCDC163A0A0D9SF12 145 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 ATG13O75143 517 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 OAZ2O95190 189 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 EPN2O95208 641 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 OR52Z1P0C646 297 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 HARSP12081 509 aaKnown RBP15.79■□□□□ 0.12
SMC1A-204ENST00000463684 RAP1GAPP47736 663 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 PLCB2Q00722 1185 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 DUSP4Q13115 394 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 DMP1Q13316 513 aaPredicted RBP15.79■□□□□ 0.12
SMC1A-204ENST00000463684 SAFBQ15424 915 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMC1A-204ENST00000463684 STXBP5Q5T5C0 1151 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 GPR158Q5T848 1215 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 KBTBD6Q86V97 674 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 TMC8Q8IU68 726 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 KMT5AQ9NQR1 393 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 RXFP3Q9NSD7 469 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 THG1LQ9NWX6 298 aaKnown RBP15.79■□□□□ 0.12
SMC1A-204ENST00000463684 RALYQ9UKM9 306 aaKnown RBP15.79■□□□□ 0.12
SMC1A-204ENST00000463684 SLC8A2Q9UPR5 921 aa15.79■□□□□ 0.12
SMC1A-204ENST00000463684 TIMM13Q9Y5L4 95 aaPredicted RBP15.79■□□□□ 0.12
SMC1A-204ENST00000463684 EXTL3O43909 919 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 KCNK5O95279 499 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 PROS1P07225 676 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 OR4Q2P0C623 313 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 PXNP49023 591 aaPredicted RBP15.78■□□□□ 0.12
SMC1A-204ENST00000463684 GPR17Q13304 367 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 ZNF174Q15697 407 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 ITPRIPL2Q3MIP1 535 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 BPIFB1Q8TDL5 484 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 LRRC3BQ96PB8 259 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 TMEM209Q96SK2 561 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 LSM14BQ9BX40 385 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms