RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 COL20A1Q9P218 1284 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 SNX24Q9Y343 169 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 PCDHB2Q9Y5E7 798 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 DDX39AO00148 427 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 NFIBO00712 420 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 BACH1O14867 736 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 SLC16A4O15374 487 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 CYP26A1O43174 497 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 RIPK2O43353 540 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 THAP12O43422 761 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 CNMDO75829 334 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 PIGRP01833 764 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 PSAPP07602 524 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 TAL1P17542 331 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 DRD4P21917 467 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 RPL21P46778 160 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 NPTX2P47972 431 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 AP3M2P53677 418 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 SEC24CP53992 1094 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 ZNF211Q13398 564 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 SIX1Q15475 284 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 LRRC26Q2I0M4 334 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 LRIT3Q3SXY7 679 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 ZNF568Q3ZCX4 644 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 LIN9Q5TKA1 542 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 LHX8Q68G74 356 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 SLFN12LQ6IEE8 588 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 GPR153Q6NV75 609 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 C15orf39Q6ZRI6 1047 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 CCDC197Q8NCU1 140 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 PLEKHO2Q8TD55 490 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 PSPC1Q8WXF1 523 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 DDX1Q92499 740 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 KRT35Q92764 455 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 SNF8Q96H20 258 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 PCDHB18PQ96TA0 734 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 IKZF4Q9H2S9 585 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 PPCSQ9HAB8 311 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 POLD4Q9HCU8 107 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 CNOT8Q9UFF9 292 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 DDX20Q9UHI6 824 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 NR2E1Q9Y466 385 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 PPME1Q9Y570 386 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 ACTL7BQ9Y614 415 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 SCINQ9Y6U3 715 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 RLFQ13129 1914 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 DENND3A2RUS2 1198 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 RASGRF2O14827 1237 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 EXTL3O43909 919 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 SORBS3O60504 671 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 CAND2O75155 1236 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 DNAJC8O75937 253 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 MMEP08473 750 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 UNGP13051 313 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 TBXAS1P24557 533 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 RPS6P62753 249 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 IFT88Q13099 833 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 PSMD6Q15008 389 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 PPP1R7Q15435 360 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 SGO2Q562F6 1265 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 WDR44Q5JSH3 913 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 FAM102BQ5T8I3 360 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 RNF187Q5TA31 235 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 WDR78Q5VTH9 848 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 ARHGEF16Q5VV41 709 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 DNAAF5Q86Y56 855 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 GBP7Q8N8V2 638 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 IL31RAQ8NI17 732 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 MAGEC3Q8TD91 643 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 IPO4Q8TEX9 1081 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 ATXN2LQ8WWM7 1075 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 GLG1Q92896 1179 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 C18orf8Q96DM3 657 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 C12orf42Q96LP6 360 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 RMDN3Q96TC7 470 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 TRIM31Q9BZY9 425 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 YY1AP1Q9H869 796 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 ATP6V0A4Q9HBG4 840 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 INTS9Q9NV88 658 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 FLRT1Q9NZU1 646 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 SAMD15Q9P1V8 674 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 STYXL1Q9Y6J8 313 aa11.26□□□□□ -0.61
GTF3C2-206ENST00000454704 DOCK5Q9H7D0 1870 aa11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 LAMA2P24043 3122 aaKnown RBP11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 CYP1A1P04798 512 aaPredicted RBP11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 RARAP10276 462 aa11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 PYGMP11217 842 aa11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 ADSSP30520 456 aa11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 HNRNPH1P31943 449 aaKnown RBP11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 CCNA1P78396 465 aa11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 NR1H3Q13133 447 aa11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 SLC29A2Q14542 456 aa11.25□□□□□ -0.61
GTF3C2-206ENST00000454704 PTPROQ16827 1216 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms