RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 APOL6Q9BWW8 343 aa8.13□□□□□ -1.11
RBM39-218ENST00000449489 TEKT3Q9BXF9 490 aa8.13□□□□□ -1.11
RBM39-218ENST00000449489 EIF2AQ9BY44 585 aaKnown RBP8.13□□□□□ -1.11
RBM39-218ENST00000449489 GPR88Q9GZN0 384 aa8.13□□□□□ -1.11
RBM39-218ENST00000449489 ZMYND12Q9H0C1 365 aa8.13□□□□□ -1.11
RBM39-218ENST00000449489 DHX33Q9H6R0 707 aaKnown RBP8.13□□□□□ -1.11
RBM39-218ENST00000449489 MTRRQ9UBK8 725 aa8.13□□□□□ -1.11
RBM39-218ENST00000449489 BACE2Q9Y5Z0 518 aa8.13□□□□□ -1.11
RBM39-218ENST00000449489 PTPN13Q12923 2485 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 ATG2BQ96BY7 2078 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 WDR27A2RRH5 827 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 C4orf47A7E2U8 309 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 TMEM189-UBE2V1I3L0A0 370 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 NRG2O14511 850 aaPredicted RBP8.12□□□□□ -1.11
RBM39-218ENST00000449489 CHADO15335 359 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 ADAM12O43184 909 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 TSPAN1O60635 241 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 DKC1O60832 514 aaKnown RBP eCLIP8.12□□□□□ -1.11
RBM39-218ENST00000449489 PSMD10O75832 226 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 ERLIN2O94905 339 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 ADH1CP00326 375 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 CEBPBP17676 345 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 FGFR3P22607 806 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 OR1D2P34982 312 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 RBM25P49756 843 aaKnown RBP8.12□□□□□ -1.11
RBM39-218ENST00000449489 FCHO2Q0JRZ9 810 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 LAMTOR4Q0VGL1 99 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 PLK5Q496M5 336 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 CRTC2Q53ET0 693 aaPredicted RBP8.12□□□□□ -1.11
RBM39-218ENST00000449489 LRCH2Q5VUJ6 765 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 HEATR6Q6AI08 1181 aaKnown RBP8.12□□□□□ -1.11
RBM39-218ENST00000449489 KBTBD6Q86V97 674 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 CHD1LQ86WJ1 897 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 PROSER1Q86XN7 944 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 REXO1Q8N1G1 1221 aaKnown RBP8.12□□□□□ -1.11
RBM39-218ENST00000449489 CAMKK1Q8N5S9 505 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 LEMD2Q8NC56 503 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 ZNF461Q8TAF7 563 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 CCDC12Q8WUD4 166 aaPredicted RBP8.12□□□□□ -1.11
RBM39-218ENST00000449489 EDEM2Q9BV94 578 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 UNC45AQ9H3U1 944 aa8.12□□□□□ -1.11
RBM39-218ENST00000449489 ATMQ13315 3056 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 BCLAF3A2AJT9 711 aaKnown RBP8.11□□□□□ -1.11
RBM39-218ENST00000449489 H0Y626 953 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 SIAH2O43255 324 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 ATG13O75143 517 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 RHOBTB1O94844 696 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 ABLIM3O94929 683 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 TRIM16O95361 564 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 SRGAP2CP0DJJ0 459 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 SPINK2P20155 84 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 GNA11P29992 359 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 RCAN1P53805 252 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 PTENP60484 403 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 PSMC5P62195 406 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 NUCB1Q02818 461 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 AAMPQ13685 434 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 MXD4Q14582 209 aaPredicted RBP8.11□□□□□ -1.11
RBM39-218ENST00000449489 CCDC6Q16204 474 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 PFKFB3Q16875 520 aaPredicted RBP8.11□□□□□ -1.11
RBM39-218ENST00000449489 Q4G0T1 1027 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 WDR44Q5JSH3 913 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 SLC8B1Q6J4K2 584 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 SYNE3Q6ZMZ3 975 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 Q6ZS52 159 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 MIER3Q7Z3K6 550 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 PDZD3Q86UT5 571 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 FERMT3Q86UX7 667 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 TCEAL8Q8IYN2 117 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 CCDC116Q8IYX3 515 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 BICD2Q8TD16 824 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 CSGALNACT1Q8TDX6 532 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 TCP11Q8WWU5 503 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 PAAF1Q9BRP4 392 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 NFKBIZQ9BYH8 718 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 TRIM6Q9C030 488 aaPredicted RBP8.11□□□□□ -1.11
RBM39-218ENST00000449489 C6orf50Q9HD87 102 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 C2orf42Q9NWW7 574 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 CACNA2D2Q9NY47 1150 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 MAFFQ9ULX9 164 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 HES2Q9Y543 173 aa8.11□□□□□ -1.11
RBM39-218ENST00000449489 GOLGA4Q13439 2230 aaKnown RBP8.1□□□□□ -1.11
RBM39-218ENST00000449489 MGAQ8IWI9 3026 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 CYP3A7-CYP3A51PA0A087WV96 503 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 A0A1B0GUA9 196 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 LNP1A1A4G5 178 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 TMEM150BA6NC51 233 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 UPK3BL1B0FP48 263 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 SPECC1L-ADORA2AF8WAN1 911 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 ERVH48-1M5A8F1 160 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 EDIL3O43854 480 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 KIF4AO95239 1232 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 CAVIN2O95810 425 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 TOP3BO95985 862 aaKnown RBP8.1□□□□□ -1.11
RBM39-218ENST00000449489 LRG1P02750 347 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 CCDC192P0DO97 292 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 ATF2P15336 505 aa8.1□□□□□ -1.11
RBM39-218ENST00000449489 CYP3A7P24462 503 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms