RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 SLC8B1Q6J4K2 584 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 STXBP4Q6ZWJ1 553 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 ZNF461Q8TAF7 563 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 HPS3Q969F9 1004 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 STRA6Q9BX79 667 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 BLZF1Q9H2G9 400 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 CPSF3Q9UKF6 684 aaKnown RBP15.21■□□□□ 0.03
TREX1-202ENST00000444177 CDH7Q9ULB5 785 aa15.21■□□□□ 0.03
TREX1-202ENST00000444177 A0A1B0GVL5 298 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 KRBA1A5PL33 1030 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 TULP1O00294 542 aaPredicted RBP15.2■□□□□ 0.02
TREX1-202ENST00000444177 SYN3O14994 580 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 XPOTO43592 962 aaKnown RBP15.2■□□□□ 0.02
TREX1-202ENST00000444177 TBC1D4O60343 1298 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 ABLIM3O94929 683 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 SRFP11831 508 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 AOC1P19801 751 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 CASP1P29466 404 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 AFMP43652 599 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 ACOT2P49753 483 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 MRPL58Q14197 206 aaKnown RBP15.2■□□□□ 0.02
TREX1-202ENST00000444177 GRAMD1CQ8IYS0 662 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 TMEM130Q8N3G9 435 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 ITFG1Q8TB96 612 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 FGF13Q92913 245 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 C7orf25Q9BPX7 421 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 RPP25Q9BUL9 199 aaKnown RBP15.2■□□□□ 0.02
TREX1-202ENST00000444177 SCAND2PQ9GZW5 306 aaPredicted RBP15.2■□□□□ 0.02
TREX1-202ENST00000444177 HCFC1R1Q9NWW0 138 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 DNMT3BQ9UBC3 853 aaKnown RBP15.2■□□□□ 0.02
TREX1-202ENST00000444177 SERTAD1Q9UHV2 236 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 UBQLN1Q9UMX0 589 aaKnown RBP15.2■□□□□ 0.02
TREX1-202ENST00000444177 STYXL1Q9Y6J8 313 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 NUMBLQ9Y6R0 609 aa15.2■□□□□ 0.02
TREX1-202ENST00000444177 H7C4K7 107 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 STK25O00506 426 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 MCM4P33991 863 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 ARPP19P56211 112 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 ROR1Q01973 937 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 POSTNQ15063 836 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 ZBTB6Q15916 424 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 FAM26FQ5R3K3 315 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 JADE1Q6IE81 842 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 PARM1Q6UWI2 310 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 UNC13DQ70J99 1090 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 CD302Q8IX05 232 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 GLIS3Q8NEA6 775 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 GPR152Q8TDT2 470 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 NOC3LQ8WTT2 800 aaKnown RBP15.19■□□□□ 0.02
TREX1-202ENST00000444177 FGF14Q92915 247 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 SAAL1Q96ER3 474 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 SUSD3Q96L08 255 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 RTP3Q9BQQ7 232 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 TMEM206Q9H813 350 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 GDPD2Q9HCC8 539 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 FBXL5Q9UKA1 691 aa15.19■□□□□ 0.02
TREX1-202ENST00000444177 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.19■□□□□ 0.02
TREX1-202ENST00000444177 ARHGEF37A1IGU5 675 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 WDR27A2RRH5 827 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 ACTN4O43707 911 aaKnown RBP15.18■□□□□ 0.02
TREX1-202ENST00000444177 NFICP08651 508 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 ATF2P15336 505 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 CMA1P23946 247 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 ADSSP30520 456 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 ELF1P32519 619 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 CUL4BQ13620 913 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 TMEM132DQ14C87 1099 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 CTXN3Q4LDR2 81 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 PABPC1LQ4VXU2 614 aaKnown RBP15.18■□□□□ 0.02
TREX1-202ENST00000444177 ARMCX5Q6P1M9 558 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 CNNM4Q6P4Q7 775 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 APPL2Q8NEU8 664 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 BEST2Q8NFU1 509 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
TREX1-202ENST00000444177 FAM213AQ9BRX8 229 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 SLC2A4RGQ9NR83 387 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 CA14Q9ULX7 337 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 FAM186AA6NE01 2351 aa15.18■□□□□ 0.02
TREX1-202ENST00000444177 ANK1P16157 1881 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 PRRG1O14668 218 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
TREX1-202ENST00000444177 SEC24AO95486 1093 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 SLFN14P0C7P3 912 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 CYP3A5P20815 502 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 GARTP22102 1010 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 LRPAP1P30533 357 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 SYKP43405 635 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 GPC5P78333 572 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 TPGS2Q68CL5 300 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 TCEAL8Q8IYN2 117 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 FSIP1Q8NA03 581 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 TSPAN18Q96SJ8 248 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 CBWD1Q9BRT8 395 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 PCIF1Q9H4Z3 704 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 CHMP5Q9NZZ3 219 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 PCDHB8Q9UN66 801 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 HPSEQ9Y251 543 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 DERAQ9Y315 318 aa15.17■□□□□ 0.02
TREX1-202ENST00000444177 MRPS23Q9Y3D9 190 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms