RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 PALMO75781 387 aa14.29□□□□□ -0.12
SRSF5-201ENST00000394366 HOXC8P31273 242 aa14.29□□□□□ -0.12
SRSF5-201ENST00000394366 HADHBP55084 474 aaKnown RBP14.29□□□□□ -0.12
SRSF5-201ENST00000394366 ZNF200P98182 395 aaPredicted RBP14.29□□□□□ -0.12
SRSF5-201ENST00000394366 TFAMQ00059 246 aaKnown RBP14.29□□□□□ -0.12
SRSF5-201ENST00000394366 LRIT3Q3SXY7 679 aa14.29□□□□□ -0.12
SRSF5-201ENST00000394366 TAF2Q6P1X5 1199 aa14.29□□□□□ -0.12
SRSF5-201ENST00000394366 TRIM72Q6ZMU5 477 aa14.29□□□□□ -0.12
SRSF5-201ENST00000394366 RSRC2Q7L4I2 434 aaKnown RBP14.29□□□□□ -0.12
SRSF5-201ENST00000394366 NOP9Q86U38 636 aaKnown RBP14.29□□□□□ -0.12
SRSF5-201ENST00000394366 SLC47A2Q86VL8 602 aa14.29□□□□□ -0.12
SRSF5-201ENST00000394366 GPR161Q8N6U8 529 aaKnown RBP14.29□□□□□ -0.12
SRSF5-201ENST00000394366 CAGE1Q8TC20 777 aa14.29□□□□□ -0.12
SRSF5-201ENST00000394366 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 CES2O00748 559 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 CLSTN1O94985 981 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 CXCL8P10145 99 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 ACRP10323 421 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 GRM5P41594 1212 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 FMO1Q01740 532 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 PTK7Q13308 1070 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 HIC1Q14526 733 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 KIZQ2M2Z5 673 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 ERCC6LQ2NKX8 1250 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 NOTUMQ6P988 496 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 CATSPER4Q7RTX7 472 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 SLC20A1Q8WUM9 679 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 TRIM11Q96F44 468 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 SCLYQ96I15 445 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 ACAP3Q96P50 834 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 CCDC94Q9BW85 323 aaPredicted RBP14.28□□□□□ -0.12
SRSF5-201ENST00000394366 NIF3L1Q9GZT8 377 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 FAM49AQ9H0Q0 323 aaPredicted RBP14.28□□□□□ -0.12
SRSF5-201ENST00000394366 FAM124BQ9H5Z6 455 aaPredicted RBP14.28□□□□□ -0.12
SRSF5-201ENST00000394366 PLEKHA5Q9HAU0 1116 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 IL23AQ9NPF7 189 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.28□□□□□ -0.122e-6■■■■■ 83.9
SRSF5-201ENST00000394366 C2CD2Q9Y426 696 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 ANK1P16157 1881 aa14.28□□□□□ -0.12
SRSF5-201ENST00000394366 GRID2IPA4D2P6 1211 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 FTLP02792 175 aaPredicted RBP14.27□□□□□ -0.12
SRSF5-201ENST00000394366 TUBBP07437 444 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 DARSP14868 501 aaKnown RBP14.27□□□□□ -0.12
SRSF5-201ENST00000394366 CHRNB2P17787 502 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 ACO1P21399 889 aaKnown RBP14.27□□□□□ -0.12
SRSF5-201ENST00000394366 EIF4BP23588 611 aaKnown RBP14.27□□□□□ -0.12
SRSF5-201ENST00000394366 ATICP31939 592 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 OSTNP61366 133 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 GPC5P78333 572 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 ITIH3Q06033 890 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 ELF2Q15723 593 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 MEI1Q5TIA1 1274 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 SLC27A1Q6PCB7 646 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 PSRC1Q6PGN9 363 aaPredicted RBP14.27□□□□□ -0.12
SRSF5-201ENST00000394366 C16orf59Q7L2K0 433 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 TPCN2Q8NHX9 752 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 CPB2Q96IY4 423 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 RNPC3Q96LT9 517 aaKnown RBP14.27□□□□□ -0.12
SRSF5-201ENST00000394366 OSBPL9Q96SU4 736 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 PPP1R16BQ96T49 567 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.27□□□□□ -0.125e-9■■□□□ 12.5
SRSF5-201ENST00000394366 APOBEC3GQ9HC16 384 aaKnown RBP14.27□□□□□ -0.12
SRSF5-201ENST00000394366 ARGLU1Q9NWB6 273 aaPredicted RBP14.27□□□□□ -0.12
SRSF5-201ENST00000394366 DERAQ9Y315 318 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 NUB1Q9Y5A7 615 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 PCDHB4Q9Y5E5 795 aa14.27□□□□□ -0.12
SRSF5-201ENST00000394366 MYH10P35580 1976 aa14.27□□□□□ -0.13
SRSF5-201ENST00000394366 PAFAH1B1P43034 410 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 CRYBB1P53674 252 aaPredicted RBP14.26□□□□□ -0.13
SRSF5-201ENST00000394366 ZNF699Q32M78 642 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 TMEM240Q5SV17 173 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 ZNF365Q70YC5 407 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 ZNF572Q7Z3I7 529 aaPredicted RBP14.26□□□□□ -0.13
SRSF5-201ENST00000394366 SLFN11Q7Z7L1 901 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 RSPH3Q86UC2 560 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 CDR2LQ86X02 465 aaPredicted RBP14.26□□□□□ -0.13
SRSF5-201ENST00000394366 EFCAB13Q8IY85 973 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 CEP120Q8N960 986 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 LRRC57Q8N9N7 239 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 DDX1Q92499 740 aaKnown RBP14.26□□□□□ -0.13
SRSF5-201ENST00000394366 TSC1Q92574 1164 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 TSPAN18Q96SJ8 248 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 TLR10Q9BXR5 811 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 PUF60Q9UHX1 559 aaKnown RBP14.26□□□□□ -0.13
SRSF5-201ENST00000394366 LACTBL1A8MY62 500 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 TMCO5BA8MYB1 307 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 SOX1O00570 391 aaPredicted RBP14.26□□□□□ -0.13
SRSF5-201ENST00000394366 TREHO43280 583 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 FGBP02675 491 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 MMEP08473 750 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 MYBL1P10243 752 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 CKBP12277 381 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 P4HA1P13674 534 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 SELPP16109 830 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 RFC2P35250 354 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 MYL6P60660 151 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 TMEM132DQ14C87 1099 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 RPS6KA1Q15418 735 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 CLEC16AQ2KHT3 1053 aa14.26□□□□□ -0.13
SRSF5-201ENST00000394366 TEX35Q5T0J7 233 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms