RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 UNGP13051 313 aaPredicted RBP11.61□□□□□ -0.55
PDGFD-202ENST00000393158 C9orf57Q5W0N0 161 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 WDR24Q96S15 920 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 CYTH4Q9UIA0 394 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 NAGPAQ9UK23 515 aa11.61□□□□□ -0.55
PDGFD-202ENST00000393158 TCRBV5S1A1TA0A578 114 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 CYP26A1O43174 497 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 GABBR2O75899 941 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 FGFR1P11362 822 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 LRPAP1P30533 357 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 RAP1GAPP47736 663 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 SFMBT2Q5VUG0 894 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 CCDC170Q8IYT3 715 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 CAGE1Q8TC20 777 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 TCHPQ9BT92 498 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 MUC3AQ02505 3323 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 PTMAP06454 111 aaKnown RBP11.6□□□□□ -0.55
PDGFD-202ENST00000393158 CYP11B1P15538 503 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 MLH1P40692 756 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 C16orf59Q7L2K0 433 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 HCSTQ9UBK5 93 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 MYO16Q9Y6X6 1858 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 UQCRHLA0A096LP55 91 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 KBTBD13C9JR72 458 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 ITGB1P05556 798 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 UQCRHP07919 91 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 AP3M2P53677 418 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 CDH8P55286 799 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 SOWAHAQ2M3V2 549 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 ECHDC2Q86YB7 292 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 JAKMIP2Q96AA8 810 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 SCLYQ96I15 445 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 TRMT1Q9NXH9 659 aaKnown RBP11.6□□□□□ -0.55
PDGFD-202ENST00000393158 DPP3Q9NY33 737 aa11.6□□□□□ -0.55
PDGFD-202ENST00000393158 OFD1O75665 1012 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 MMEP08473 750 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 SELPP16109 830 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 RAD23BP54727 409 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 TFAMQ00059 246 aaKnown RBP11.59□□□□□ -0.55
PDGFD-202ENST00000393158 RAPGEF1Q13905 1077 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 TMEM132DQ14C87 1099 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 PKN2Q16513 984 aaKnown RBP11.59□□□□□ -0.55
PDGFD-202ENST00000393158 UPP1Q16831 310 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 NT5DC4Q86YG4 428 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 RTP3Q9BQQ7 232 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 BEGAINQ9BUH8 593 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 ADAMTS1Q9UHI8 967 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 COG5Q9UP83 839 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 COL6A3P12111 3177 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 CYP1A1P04798 512 aaPredicted RBP11.59□□□□□ -0.55
PDGFD-202ENST00000393158 RPLP2P05387 115 aaKnown RBP11.59□□□□□ -0.55
PDGFD-202ENST00000393158 PFKMP08237 780 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 POLR2BP30876 1174 aaKnown RBP11.59□□□□□ -0.55
PDGFD-202ENST00000393158 PIK3CAP42336 1068 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 DSC1Q08554 894 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 ARHGAP44Q17R89 818 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 CCDC142Q17RM4 750 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 ANKLE1Q8NAG6 615 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 ELOVL4Q9GZR5 314 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 ITGA11Q9UKX5 1188 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 DENND4CQ5VZ89 1909 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 CTCFP49711 727 aaPredicted RBP11.59□□□□□ -0.55
PDGFD-202ENST00000393158 TLE2Q04725 743 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 KYAT1Q16773 422 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 PPM1KQ8N3J5 372 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 SLC4A11Q8NBS3 891 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 FAXDC2Q96IV6 333 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 PAWRQ96IZ0 340 aaKnown RBP11.59□□□□□ -0.55
PDGFD-202ENST00000393158 FNBP1Q96RU3 617 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 ADAM2Q99965 735 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 SEZ6LQ9BYH1 1024 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 IFIH1Q9BYX4 1025 aaKnown RBP11.59□□□□□ -0.55
PDGFD-202ENST00000393158 ISCUQ9H1K1 167 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 VCANP13611 3396 aa11.59□□□□□ -0.55
PDGFD-202ENST00000393158 GPR182O15218 404 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 CILPO75339 1184 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 ATN1P54259 1190 aaPredicted RBP11.58□□□□□ -0.56
PDGFD-202ENST00000393158 PKDCCQ504Y2 493 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 GLYCTKQ8IVS8 523 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 USP38Q8NB14 1042 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 LPIN3Q9BQK8 851 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 PQBP1O60828 265 aaKnown RBP11.58□□□□□ -0.56
PDGFD-202ENST00000393158 DDHD2O94830 711 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 MATR3P43243 847 aaKnown RBP eCLIP11.58□□□□□ -0.56
PDGFD-202ENST00000393158 GAD1Q99259 594 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 PKMYT1Q99640 499 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 MCOLN1Q9GZU1 580 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 CISHQ9NSE2 258 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 GDAP2Q9NXN4 497 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 CAPN6Q9Y6Q1 641 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 ENPP3O14638 875 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 WEE2P0C1S8 567 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 ARID5AQ03989 594 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 PAK2Q13177 524 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 SGSM1Q2NKQ1 1148 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 CD302Q8IX05 232 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
PDGFD-202ENST00000393158 MRPL45Q9BRJ2 306 aaKnown RBP11.58□□□□□ -0.56
PDGFD-202ENST00000393158 NUCKS1Q9H1E3 243 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms