RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 MTERF4Q7Z6M4 381 aaKnown RBP12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZNF653Q96CK0 615 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 TRIM11Q96F44 468 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 CELF4Q9BZC1 486 aaKnown RBP12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 GOLPH3Q9H4A6 298 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 SNTG2Q9NY99 539 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 UVRAGQ9P2Y5 699 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 AMFRQ9UKV5 643 aa12.23□□□□□ -0.45
SMARCAL1-203ENST00000392128 TRPA1O75762 1119 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 RPLP2P05387 115 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 MYBL1P10243 752 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 MAP2K2P36507 400 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 PAFAH1B1P43034 410 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 YARSP54577 528 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 MRPS6P82932 125 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 CFAP221Q4G0U5 840 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 CCDC181Q5TID7 509 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 CCSAPQ6IQ19 270 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 GDF6Q6KF10 455 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 FBXO38Q6PIJ6 1188 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 NOA1Q8NC60 698 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 MSANTD4Q8NCY6 345 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 KIF12Q96FN5 646 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 HES6Q96HZ4 224 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 PBKQ96KB5 322 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 DPP3Q9NY33 737 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 PIN4Q9Y237 131 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 THAP12O43422 761 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 GNRH1P01148 92 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 ASGR1P07306 291 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 WEE2P0C1S8 567 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 CD58P19256 250 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 POLR2BP30876 1174 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 RBP5P82980 135 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 WDR72Q3MJ13 1102 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 ALKAL1Q6UXT8 129 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 RPAINQ86UA6 219 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 RSPH3Q86UC2 560 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 MCOLN2Q8IZK6 566 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 PDCL2Q8N4E4 241 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 CD99L2Q8TCZ2 262 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZNF606Q8WXB4 792 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 TRIM6Q9C030 488 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 PDCL3Q9H2J4 239 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 FAM124BQ9H5Z6 455 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 ANKZF1Q9H8Y5 726 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 AVENQ9NQS1 362 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 NXF1Q9UBU9 619 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 POLIQ9UNA4 740 aa12.22□□□□□ -0.45
SMARCAL1-203ENST00000392128 FAM170AA1A519 330 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 M0QZ92 97 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 P4HA1P13674 534 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 NSFP46459 744 aaKnown RBP12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 NOMO3P69849 1222 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 ZBTB6Q15916 424 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 KCNA10Q16322 511 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 NAA35Q5VZE5 725 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 SCARA5Q6ZMJ2 495 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 SERINC5Q86VE9 423 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 PCSK9Q8NBP7 692 aaKnown RBP12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 CYFIP2Q96F07 1278 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 HPDLQ96IR7 371 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 VCPIP1Q96JH7 1222 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 TSPAN18Q96SJ8 248 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 NUP85Q9BW27 656 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 EPC1Q9H2F5 836 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 NXF3Q9H4D5 531 aaKnown RBP12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 CYP3A43Q9HB55 503 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 ARGLU1Q9NWB6 273 aaPredicted RBP12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 CNTN3Q9P232 1028 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 TRPV2Q9Y5S1 764 aa12.21□□□□□ -0.45
SMARCAL1-203ENST00000392128 KCNK3O14649 394 aa12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 UBXN11Q5T124 520 aa12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 MON1BQ7L1V2 547 aa12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 PHF13Q86YI8 300 aaPredicted RBP12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 SPATA4Q8NEY3 305 aa12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 ZNF564Q8TBZ8 553 aaPredicted RBP12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 PXYLP1Q8TE99 480 aa12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 CPA5Q8WXQ8 436 aa12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 PARD6BQ9BYG5 372 aa12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 CNOT8Q9UFF9 292 aaKnown RBP12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 PCDHGC3Q9UN70 934 aa12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 AGAP1Q9UPQ3 857 aa12.21□□□□□ -0.46
SMARCAL1-203ENST00000392128 RECQL4O94761 1208 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 LSM8O95777 96 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 CFHP08603 1231 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 DNA2P51530 1060 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 FAM228AQ86W67 206 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 TMEM130Q8N3G9 435 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 MMGT1Q8N4V1 131 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 ZMAT2Q96NC0 199 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 RPS6KC1Q96S38 1066 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 DDX20Q9UHI6 824 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 HES2Q9Y543 173 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 CDY2AQ9Y6F7 541 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 TUBBP07437 444 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 PAEPP09466 180 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 GUCY2FP51841 1108 aa12.2□□□□□ -0.46
SMARCAL1-203ENST00000392128 C2orf54Q08AI8 447 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms