RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 MYCNP04198 464 aaPredicted RBP18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 CST5P28325 142 aaPredicted RBP18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 HOXD10P28358 340 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 SSTR3P32745 418 aaPredicted RBP18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 MRPS6P82932 125 aaKnown RBP18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 RPS6KA1Q15418 735 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 ZNF667Q5HYK9 610 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 FBXO38Q6PIJ6 1188 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 ZNF572Q7Z3I7 529 aaPredicted RBP18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 PEX26Q7Z412 305 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 GPR161Q8N6U8 529 aaKnown RBP18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 CPA5Q8WXQ8 436 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 CYFIP2Q96F07 1278 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 ZSWIM1Q9BR11 485 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 SDCBP2Q9H190 292 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 VRTNQ9H8Y1 702 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 GTF3C4Q9UKN8 822 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 ITGA11Q9UKX5 1188 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 PDCD11Q14690 1871 aaKnown RBP18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 THAP12O43422 761 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 MTA2O94776 668 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 ATICP31939 592 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 MAP2K2P36507 400 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 RAP1GAPP47736 663 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 CENPCQ03188 943 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 FAM47CQ5HY64 1035 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 NAA35Q5VZE5 725 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 ALKAL1Q6UXT8 129 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 SERINC5Q86VE9 423 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 ZNF606Q8WXB4 792 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 ZNF653Q96CK0 615 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 MS4A14Q96JA4 679 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 AGAP1Q9UPQ3 857 aa18.54■□□□□ 0.56
THUMPD2-201ENST00000378727 RECQL4O94761 1208 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 H2AFXP16104 143 aaPredicted RBP18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 ZNF394Q53GI3 561 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 FAM228AQ86W67 206 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 PASD1Q8IV76 773 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 TRIM6Q9C030 488 aaPredicted RBP18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 ANKZF1Q9H8Y5 726 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 NOC2LQ9Y3T9 749 aaKnown RBP18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 CDY2AQ9Y6F7 541 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 CDH8P55286 799 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 NOMO3P69849 1222 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 ZBTB6Q15916 424 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 SESTD1Q86VW0 696 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 MCOLN2Q8IZK6 566 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 HES6Q96HZ4 224 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 HPDLQ96IR7 371 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 FAXDC2Q96IV6 333 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 RPGRIP1Q96KN7 1286 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 SMYD3Q9H7B4 428 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 DDX20Q9UHI6 824 aaKnown RBP18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 DERAQ9Y315 318 aa18.53■□□□□ 0.56
THUMPD2-201ENST00000378727 SCN1AP35498 2009 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 AKAP5P24588 427 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 YARSP54577 528 aaKnown RBP18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 TUBB4BP68371 445 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 RBP5P82980 135 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 HTRA3P83110 453 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 SMYD5Q6GMV2 418 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 TRIM72Q6ZMU5 477 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 TFAP2BQ92481 460 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 NUP85Q9BW27 656 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 APOL6Q9BWW8 343 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 PDCL3Q9H2J4 239 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 RNF39Q9H2S5 420 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 CNTN3Q9P232 1028 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 TRPV2Q9Y5S1 764 aa18.52■□□□□ 0.56
THUMPD2-201ENST00000378727 KCNK3O14649 394 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 CHRNA1P02708 482 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 BRD2P25440 801 aaKnown RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 C2orf54Q08AI8 447 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 C11orf63Q6NUN7 778 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 MON1BQ7L1V2 547 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 ZNF784Q8NCA9 323 aaPredicted RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 RAET1EQ8TD07 263 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 PARD6BQ9BYG5 372 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 RNF19AQ9NV58 838 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 CNOT8Q9UFF9 292 aaKnown RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 TUBGCP4Q9UGJ1 667 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 AMFRQ9UKV5 643 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 STAU1O95793 577 aaKnown RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 RHOXF2BP0C7M4 288 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 NSFP46459 744 aaKnown RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 YWHAEP62258 255 aaKnown RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 ITIH3Q06033 890 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 C2CD6Q53TS8 623 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 GLRA4Q5JXX5 417 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 MSANTD4Q8NCY6 345 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 SMG8Q8ND04 991 aaKnown RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 SPATA4Q8NEY3 305 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 ZNF564Q8TBZ8 553 aaPredicted RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 PXYLP1Q8TE99 480 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 WHAMMQ8TF30 809 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 C18orf25Q96B23 403 aaPredicted RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 CALR3Q96L12 384 aaKnown RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 RHOXF2Q9BQY4 288 aa18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 SENP6Q9GZR1 1112 aaPredicted RBP18.51■□□□□ 0.55
THUMPD2-201ENST00000378727 M0QZ92 97 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms