RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	CXCR5	P32302	372 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	RUFY4	Q6ZNE9	571 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	TRAPPC11	Q7Z392	1133 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	PHLDB2	Q86SQ0	1253 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	SLC47A2	Q86VL8	602 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	SESTD1	Q86VW0	696 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	BCAS4	Q8TDM0	211 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	TBC1D31	Q96DN5	1066 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	AGPAT1	Q99943	283 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	PARP2	Q9UGN5	583 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	PLXNA1	Q9UIW2	1896 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	PTPRJ	Q12913	1337 aa		12.47	□□□□□ -0.41
LMO7-204	ENST00000377499	TADA3	O75528	432 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	ATP1A1	P05023	1023 aa	Known RBP	12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	RNASE9	P60153	205 aa	Known RBP	12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	NOP14	P78316	857 aa	Known RBP	12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	SURF1	Q15526	300 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	TSHZ1	Q6ZSZ6	1077 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	LMO3	Q8TAP4	145 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	ACAP3	Q96P50	834 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	CCDC113	Q9H0I3	377 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	FBXL5	Q9UKA1	691 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	CAPN6	Q9Y6Q1	641 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	RHOXF2B	P0C7M4	288 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	YARS	P54577	528 aa	Known RBP	12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	JAM2	P57087	298 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	MYL6	P60660	151 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	CACNB2	Q08289	660 aa	Predicted RBP	12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	ZNF699	Q32M78	642 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	ZACN	Q401N2	412 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	MARCH8	Q5T0T0	291 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	RNF169	Q8NCN4	708 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	USP6NL	Q92738	828 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	TAF4B	Q92750	862 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	EZH1	Q92800	747 aa	Predicted RBP	12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	KREMEN1	Q96MU8	473 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	MMS19	Q96T76	1030 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	RHOXF2	Q9BQY4	288 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	BEGAIN	Q9BUH8	593 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	UBXN6	Q9BZV1	441 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	CDHR5	Q9HBB8	845 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	CTTNBP2NL	Q9P2B4	639 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	CHORDC1	Q9UHD1	332 aa	Predicted RBP	12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	TNFSF13B	Q9Y275	285 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	HES2	Q9Y543	173 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	SAR1B	Q9Y6B6	198 aa		12.46	□□□□□ -0.41
LMO7-204	ENST00000377499	DDX3X	O00571	662 aa	Known RBP eCLIP	12.46	□□□□□ -0.42	3e-6	■■■■■ 42.7
LMO7-204	ENST00000377499	NCK2	O43639	380 aa		12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	TFRC	P02786	760 aa	Known RBP	12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	CD19	P15391	556 aa		12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	CCND3	P30281	292 aa	Predicted RBP	12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	MAGEA10	P43363	369 aa	Predicted RBP	12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	APLP1	P51693	650 aa		12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	MCL1	Q07820	350 aa		12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	TWF2	Q6IBS0	349 aa	Known RBP	12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	PASD1	Q8IV76	773 aa		12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	MTG1	Q9BT17	334 aa	Predicted RBP	12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	L2HGDH	Q9H9P8	463 aa		12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	STYXL1	Q9Y6J8	313 aa		12.46	□□□□□ -0.42
LMO7-204	ENST00000377499	ATP8B1	O43520	1251 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	PALM	O75781	387 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	CST3	P01034	146 aa	Predicted RBP	12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	CLTA	P09496	248 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	WEE2	P0C1S8	567 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	RAB27A	P51159	221 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	NAB2	Q15742	525 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	IFI16	Q16666	785 aa	Known RBP	12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	TRIM42	Q8IWZ5	723 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	TRPV1	Q8NER1	839 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	CCDC114	Q96M63	670 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	TRIM4	Q9C037	500 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	GOLPH3	Q9H4A6	298 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	LACTBL1	A8MY62	500 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	GALC	P54803	685 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	WDR72	Q3MJ13	1102 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	GLRA4	Q5JXX5	417 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	RSPH3	Q86UC2	560 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	WDR49	Q8IV35	697 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	KIF12	Q96FN5	646 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	PACSIN2	Q9UNF0	486 aa	Predicted RBP	12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	WDR81	Q562E7	1941 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	EFCAB8	A8MWE9	144 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	SEPT4	O43236	478 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	THAP12	O43422	761 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	FTL	P02792	175 aa	Predicted RBP	12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	C4BPA	P04003	597 aa	Known RBP	12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	MME	P08473	750 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	GUCY2F	P51841	1108 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	PURA	Q00577	322 aa	Known RBP	12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	PREPL	Q4J6C6	727 aa	Predicted RBP	12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	SRGAP1	Q7Z6B7	1085 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	DAAM2	Q86T65	1068 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	ZNF410	Q86VK4	478 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	SLC30A5	Q8TAD4	765 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	RIN2	Q8WYP3	895 aa	Predicted RBP	12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	HHIPL1	Q96JK4	782 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	PHACTR1	Q9C0D0	580 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	PDZD7	Q9H5P4	517 aa		12.45	□□□□□ -0.42
LMO7-204	ENST00000377499	CREBZF	Q9NS37	354 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms