RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ATICP31939 592 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 CENPCQ03188 943 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 CFAP221Q4G0U5 840 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 TRIM72Q6ZMU5 477 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 MTERF4Q7Z6M4 381 aaKnown RBP18.89■□□□□ 0.61
CTTN-203ENST00000376561 MSANTD4Q8NCY6 345 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 CPA5Q8WXQ8 436 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 CYFIP2Q96F07 1278 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 KIF12Q96FN5 646 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 HES6Q96HZ4 224 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 VRTNQ9H8Y1 702 aa18.89■□□□□ 0.61
CTTN-203ENST00000376561 RHOXF2BP0C7M4 288 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 POLR2BP30876 1174 aaKnown RBP18.88■□□□□ 0.61
CTTN-203ENST00000376561 NAA35Q5VZE5 725 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 SPATA4Q8NEY3 305 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 ZNF606Q8WXB4 792 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 RHOXF2Q9BQY4 288 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 BCO2Q9BYV7 579 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 TRIM6Q9C030 488 aaPredicted RBP18.88■□□□□ 0.61
CTTN-203ENST00000376561 DPP3Q9NY33 737 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 SRRDQ9UH36 339 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 ITGA11Q9UKX5 1188 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 HES2Q9Y543 173 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 GUCY2FP51841 1108 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 YWHAEP62258 255 aaKnown RBP18.88■□□□□ 0.61
CTTN-203ENST00000376561 C2orf54Q08AI8 447 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 ZNF394Q53GI3 561 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 GDF6Q6KF10 455 aaPredicted RBP18.88■□□□□ 0.61
CTTN-203ENST00000376561 MCOLN2Q8IZK6 566 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 SNX27Q96L92 541 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 NUP85Q9BW27 656 aa18.88■□□□□ 0.61
CTTN-203ENST00000376561 CELF4Q9BZC1 486 aaKnown RBP18.88■□□□□ 0.61
CTTN-203ENST00000376561 CNOT8Q9UFF9 292 aaKnown RBP18.88■□□□□ 0.61
CTTN-203ENST00000376561 NSFP46459 744 aaKnown RBP18.87■□□□□ 0.61
CTTN-203ENST00000376561 APLP1P51693 650 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 YARSP54577 528 aaKnown RBP18.87■□□□□ 0.61
CTTN-203ENST00000376561 NOMO3P69849 1222 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 C11orf63Q6NUN7 778 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 PASD1Q8IV76 773 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 ZNF564Q8TBZ8 553 aaPredicted RBP18.87■□□□□ 0.61
CTTN-203ENST00000376561 CD99L2Q8TCZ2 262 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 PBKQ96KB5 322 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 CXCL16Q9H2A7 254 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 NXF3Q9H4D5 531 aaKnown RBP18.87■□□□□ 0.61
CTTN-203ENST00000376561 ARGLU1Q9NWB6 273 aaPredicted RBP18.87■□□□□ 0.61
CTTN-203ENST00000376561 UVRAGQ9P2Y5 699 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 AGAP1Q9UPQ3 857 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 DERAQ9Y315 318 aa18.87■□□□□ 0.61
CTTN-203ENST00000376561 ASGR1P07306 291 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 SSTR3P32745 418 aaPredicted RBP18.86■□□□□ 0.61
CTTN-203ENST00000376561 CLCN6P51797 869 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 KLHDC9Q8NEP7 349 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 HPDLQ96IR7 371 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 ZMAT2Q96NC0 199 aaKnown RBP18.86■□□□□ 0.61
CTTN-203ENST00000376561 ALG6Q9Y672 507 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
CTTN-203ENST00000376561 HOXD10P28358 340 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 RAP1GAPP47736 663 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 MRPS6P82932 125 aaKnown RBP18.86■□□□□ 0.61
CTTN-203ENST00000376561 RBP5P82980 135 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 KCNA10Q16322 511 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 FAM47CQ5HY64 1035 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 TRIM11Q96F44 468 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 PNKPQ96T60 521 aa18.86■□□□□ 0.61
CTTN-203ENST00000376561 RECQL4O94761 1208 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 MYBL1P10243 752 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 BRD2P25440 801 aaKnown RBP18.85■□□□□ 0.61
CTTN-203ENST00000376561 CDH8P55286 799 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 UBXN11Q5T124 520 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 CCSAPQ6IQ19 270 aaPredicted RBP18.85■□□□□ 0.61
CTTN-203ENST00000376561 ALKAL1Q6UXT8 129 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 MON1BQ7L1V2 547 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 MMGT1Q8N4V1 131 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 ZSWIM1Q9BR11 485 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 SDCBP2Q9H190 292 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 SMYD3Q9H7B4 428 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 AVENQ9NQS1 362 aaPredicted RBP18.85■□□□□ 0.61
CTTN-203ENST00000376561 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
CTTN-203ENST00000376561 M0QZ92 97 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 STAU1O95793 577 aaKnown RBP18.85■□□□□ 0.61
CTTN-203ENST00000376561 HMGCRP04035 888 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 CST5P28325 142 aaPredicted RBP18.85■□□□□ 0.61
CTTN-203ENST00000376561 ZBTB6Q15916 424 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 FAM228AQ86W67 206 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 SELENOOQ9BVL4 669 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 CNTN3Q9P232 1028 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 RAB21Q9UL25 225 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 CDY2AQ9Y6F7 541 aa18.85■□□□□ 0.61
CTTN-203ENST00000376561 THSD7BQ9C0I4 1608 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 DDX3YO15523 660 aaKnown RBP18.84■□□□□ 0.61
CTTN-203ENST00000376561 P4HA1P13674 534 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 RRM1P23921 792 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 AKAP5P24588 427 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 MESDQ14696 234 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 MAP3K21Q5TCX8 1036 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 RSPH3Q86UC2 560 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 SERINC5Q86VE9 423 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 PHF13Q86YI8 300 aaPredicted RBP18.84■□□□□ 0.61
CTTN-203ENST00000376561 WNT8BQ93098 351 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 APOL6Q9BWW8 343 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms