RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 EIF3EP60228 445 aaKnown RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 CHRNB3Q05901 458 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 LIMA1Q9UHB6 759 aaKnown RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 LOC100653049A0A140TA62 436 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 KRT34O76011 436 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 SEMA3FQ13275 785 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 TMEM270Q6UE05 265 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 CNBD1Q8NA66 436 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 NGLY1Q96IV0 654 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 CEP170P1Q96L14 293 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 C2CD2Q9Y426 696 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 NINQ8N4C6 2090 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 TPST1O60507 370 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 TRAF3Q13114 568 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 ZBTB49Q6ZSB9 765 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 MRPL48Q96GC5 212 aaKnown RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 YTHDC2Q9H6S0 1430 aaKnown RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 TTLL1O95922 423 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 TUBA3CQ13748 450 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 SDE2Q6IQ49 451 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 TTC23LQ6PF05 361 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 SVOPQ8N4V2 548 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 TUFT1Q9NNX1 390 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 CCDC182A6NF36 153 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 PHGDHO43175 533 aaKnown RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 NR3C1P04150 777 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 BARGINQ6ZT62 677 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 RORBQ92753 470 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 FBXO28Q9NVF7 368 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 TMEM51Q9NW97 253 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 USP39Q53GS9 565 aaKnown RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 VAV3Q9UKW4 847 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 UBAP1LF5GYI3 381 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 KCNT1Q5JUK3 1230 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 WDR36Q8NI36 951 aaKnown RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 LENG1Q96BZ8 264 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 SMAD5Q99717 465 aaKnown RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 RRN3Q9NYV6 651 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 PHTF1Q9UMS5 762 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 ZHX2Q9Y6X8 837 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 APOA4P06727 396 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 QARSP47897 775 aaKnown RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 CSE1LP55060 971 aaKnown RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 ITGA1P56199 1179 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 CERKLQ49MI3 558 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 VPS37AQ8NEZ2 397 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 MNTQ99583 582 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 ISCUQ9H1K1 167 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 TFCP2L1Q9NZI6 479 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 COL17A1Q9UMD9 1497 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 TNPO2O14787 897 aaKnown RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 LDHAP00338 332 aaKnown RBP15.94■□□□□ 0.14
COL5A1-201ENST00000371817 GNA15P30679 374 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 SLC29A2Q14542 456 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 CAPZA2P47755 286 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 ARPC4P59998 168 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 ZNF284Q2VY69 593 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 OR2W6PQ8NHA6 318 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 CARD14Q9BXL6 1004 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 EMC3Q9P0I2 261 aa15.94■□□□□ 0.14
COL5A1-201ENST00000371817 SMNDC1O75940 238 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 SNRPAP09012 282 aaKnown RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 ATP4AP20648 1035 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 DGKKQ5KSL6 1271 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 UBE2Q1Q7Z7E8 422 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 TTC30BQ8N4P2 665 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 ACSBG1Q96GR2 724 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 POLR1BQ9H9Y6 1135 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 PCDH11YQ9BZA8 1340 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 THRAP10827 490 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 DRAP1Q14919 205 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 COL23A1Q86Y22 540 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 RBM12Q9NTZ6 932 aaKnown RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 SERPINB5P36952 375 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 KLHL24Q6TFL4 600 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 PACS2Q86VP3 889 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 AFF4Q9UHB7 1163 aaKnown RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 HBS1LQ9Y450 684 aaKnown RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 ADGRA2Q96PE1 1338 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 K7ERI5 159 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 PEX1O43933 1283 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 RRM2P31350 389 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 HSD17B3P37058 310 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 MTF1Q14872 753 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 BNC2Q6ZN30 1099 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 CLVS1Q8IUQ0 354 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 DPP10Q8N608 796 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 ADGRL1O94910 1474 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 PWP1Q13610 501 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 ABI1Q8IZP0 508 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 OSBPL3Q9H4L5 887 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 TSR3Q9UJK0 312 aaKnown RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 SMAD1Q15797 465 aaKnown RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 ZNF699Q32M78 642 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 FAM47CQ5HY64 1035 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 LAYNQ6UX15 382 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 GIMAP8Q8ND71 665 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-201ENST00000371817 MSTO1Q9BUK6 570 aa15.93■□□□□ 0.14
COL5A1-201ENST00000371817 PSMB9P28065 219 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms