RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 CETN1Q12798 172 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 C9orf57Q5W0N0 161 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 CD300LGQ6UXG3 332 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 APBB1IPQ7Z5R6 666 aaPredicted RBP11.68□□□□□ -0.54
LCN1-202ENST00000371781 NECAB2Q7Z6G3 386 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 NOP9Q86U38 636 aaKnown RBP11.68□□□□□ -0.54
LCN1-202ENST00000371781 DNAAF5Q86Y56 855 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 TMTC1Q8IUR5 882 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 C3orf58Q8NDZ4 430 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 EPS8L1Q8TE68 723 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 DDX1Q92499 740 aaKnown RBP11.68□□□□□ -0.54
LCN1-202ENST00000371781 TWNKQ96RR1 684 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 GDF15Q99988 308 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 ZSWIM1Q9BR11 485 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 PAAF1Q9BRP4 392 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 BCO2Q9BYV7 579 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 HAUS4Q9H6D7 363 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 NHEJ1Q9H9Q4 299 aaPredicted RBP11.68□□□□□ -0.54
LCN1-202ENST00000371781 KCND1Q9NSA2 647 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 ITGA11Q9UKX5 1188 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 UBQLN1Q9UMX0 589 aaKnown RBP11.68□□□□□ -0.54
LCN1-202ENST00000371781 AGAP1Q9UPQ3 857 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 CNTN6Q9UQ52 1028 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 TTC3P53804 2025 aa11.68□□□□□ -0.54
LCN1-202ENST00000371781 FNDC1Q4ZHG4 1894 aaPredicted RBP11.68□□□□□ -0.54
LCN1-202ENST00000371781 SSU72P8A0A1W2PR75 194 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 DCDC2CA8MYV0 355 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 PIRO00625 290 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 KIAA0355O15063 1070 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 FANCGO15287 622 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 CYP26A1O43174 497 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 PHACTR2O75167 634 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 OFD1O75665 1012 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 NDUFA10O95299 355 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 LCA5LO95447 670 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 CFHP08603 1231 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 KRT19P08727 400 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 FGFR1P11362 822 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 FERP16591 822 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 ZSCAN20P17040 1043 aaPredicted RBP11.67□□□□□ -0.54
LCN1-202ENST00000371781 SYN1P17600 705 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 LRPAP1P30533 357 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 CDH8P55286 799 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 SLC47A2Q86VL8 602 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 CCAR2Q8N163 923 aaKnown RBP11.67□□□□□ -0.54
LCN1-202ENST00000371781 ZNF397Q8NF99 534 aaPredicted RBP11.67□□□□□ -0.54
LCN1-202ENST00000371781 WHAMMQ8TF30 809 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 PPP1R13BQ96KQ4 1090 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 PCDHB18PQ96TA0 734 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 RSAD1Q9HA92 442 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 HCSTQ9UBK5 93 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 PPP2R2CQ9Y2T4 447 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 GIT1Q9Y2X7 761 aa11.67□□□□□ -0.54
LCN1-202ENST00000371781 A0A087X0T9 212 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 EIF3CLB5ME19 914 aaKnown RBP11.66□□□□□ -0.54
LCN1-202ENST00000371781 F8W810 466 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 ENPP3O14638 875 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 HCRTO43612 131 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 ZNF500O60304 480 aaPredicted RBP11.66□□□□□ -0.54
LCN1-202ENST00000371781 FAM228BP0C875 321 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 CAPN2P17655 700 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 BMP8BP34820 402 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 MFAP3P55082 362 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 FMO1Q01740 532 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 CYP27A1Q02318 531 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 GFPT1Q06210 699 aaPredicted RBP11.66□□□□□ -0.54
LCN1-202ENST00000371781 KLHL30Q0D2K2 578 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 TRPC3Q13507 836 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 SGSM1Q2NKQ1 1148 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 TDRD12Q587J7 1177 aaKnown RBP11.66□□□□□ -0.54
LCN1-202ENST00000371781 SLC24A5Q71RS6 500 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 Q7L0L9 218 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 LIMS2Q7Z4I7 341 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 RNF169Q8NCN4 708 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 BEST2Q8NFU1 509 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 SLC30A5Q8TAD4 765 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 RABGGTAQ92696 567 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 EIF3CQ99613 913 aaKnown RBP11.66□□□□□ -0.54
LCN1-202ENST00000371781 ELOVL4Q9GZR5 314 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 NUCKS1Q9H1E3 243 aaKnown RBP11.66□□□□□ -0.54
LCN1-202ENST00000371781 TRMT1Q9NXH9 659 aaKnown RBP11.66□□□□□ -0.54
LCN1-202ENST00000371781 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
LCN1-202ENST00000371781 EPN1Q9Y6I3 576 aaPredicted RBP11.66□□□□□ -0.54
LCN1-202ENST00000371781 FAM170AA1A519 330 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 CASTOR2A6NHX0 329 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 POMCP01189 267 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 WEE2P0C1S8 567 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 CD58P19256 250 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 CYP3A5P20815 502 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 ATICP31939 592 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 RBP5P82980 135 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 ORC1Q13415 861 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 ZNF667Q5HYK9 610 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 WDR44Q5JSH3 913 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.65□□□□□ -0.54
LCN1-202ENST00000371781 ENOSF1Q7L5Y1 443 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 DEFB128Q7Z7B8 93 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 OSTM1Q86WC4 334 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 LRRC52Q8N7C0 313 aa11.65□□□□□ -0.54
LCN1-202ENST00000371781 RBBP8NLQ8NC74 664 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms