RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 TMEM8AQ9HCN3 771 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 KCND2Q9NZV8 630 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 SUGT1Q9Y2Z0 365 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 PPP1R12AO14974 1030 aaPredicted RBP8.66□□□□□ -1.02
CD46-208ENST00000367042 MDH1BQ5I0G3 518 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 C1orf220Q5T0J3 134 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 RNF43Q68DV7 783 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 NLRP9Q7RTR0 991 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 SLC9A9Q8IVB4 645 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 PALM2Q8IXS6 379 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 SEPT12Q8IYM1 358 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 MXRA8Q9BRK3 442 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 IQCGQ9H095 443 aaKnown RBP8.66□□□□□ -1.02
CD46-208ENST00000367042 RNPEPL1Q9HAU8 725 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 GINM1Q9NU53 330 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 ZFATQ9P243 1243 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 SAE1Q9UBE0 346 aaPredicted RBP8.66□□□□□ -1.02
CD46-208ENST00000367042 NFIBO00712 420 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 GYG2O15488 501 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 CALB2P22676 271 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 GNA15P30679 374 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 LIG4P49917 911 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 MMP14P50281 582 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 RCN2Q14257 317 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 SLC1A5Q15758 541 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 NFIL3Q16649 462 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 SMTNL2Q2TAL5 461 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 TMEM154Q6P9G4 183 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 DPH6Q7L8W6 267 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 AGGF1Q8N302 714 aaeCLIP8.65□□□□□ -1.02
CD46-208ENST00000367042 MAB21L3Q8N8X9 362 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 GMCL1P1Q8NEA9 526 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 HELQQ8TDG4 1101 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 PYROXD1Q8WU10 500 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 ZDHHC15Q96MV8 337 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 TSC22D3Q99576 134 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 DLGAP2Q9P1A6 1054 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 TBX20Q9UMR3 447 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 MROH7Q68CQ1 1323 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 ATP5HO75947 161 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 ADRA1DP25100 572 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 SSTR1P30872 391 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 PTDSS1P48651 473 aaKnown RBP8.65□□□□□ -1.02
CD46-208ENST00000367042 POLE2P56282 527 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 BASP1P80723 227 aaKnown RBP8.65□□□□□ -1.02
CD46-208ENST00000367042 BIRC2Q13490 618 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 EFTUD2Q15029 972 aaKnown RBP eCLIP8.65□□□□□ -1.023e-14■■■■□ 23.3
CD46-208ENST00000367042 SEZ6Q53EL9 994 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 SYDE1Q6ZW31 735 aaPredicted RBP8.65□□□□□ -1.02
CD46-208ENST00000367042 CENPUQ71F23 418 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 RHPN2Q8IUC4 686 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 CTAGE3PQ8IX95 158 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 STK32AQ8WU08 396 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 DNAJC9Q8WXX5 260 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 ZWILCHQ9H900 591 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 ADGRA3Q8IWK6 1321 aa8.65□□□□□ -1.02
CD46-208ENST00000367042 ECE2O60344 883 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 CFHP08603 1231 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 NPTX2P47972 431 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 SATB1Q01826 763 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 NFX1Q12986 1120 aaKnown RBP8.65□□□□□ -1.03
CD46-208ENST00000367042 ALCAMQ13740 583 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 RCN1Q15293 331 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 UGCGQ16739 394 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 MEX3CQ5U5Q3 659 aaKnown RBP8.65□□□□□ -1.03
CD46-208ENST00000367042 CCDC62Q6P9F0 684 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 TRABD2AQ86V40 505 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 PDCD7Q8N8D1 485 aaKnown RBP8.65□□□□□ -1.03
CD46-208ENST00000367042 C12orf50Q8NA57 414 aaPredicted RBP8.65□□□□□ -1.03
CD46-208ENST00000367042 MAML1Q92585 1016 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 UTP4Q969X6 686 aaKnown RBP8.65□□□□□ -1.03
CD46-208ENST00000367042 PRMT6Q96LA8 375 aaPredicted RBP8.65□□□□□ -1.03
CD46-208ENST00000367042 TCHPQ9BT92 498 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 MRPL47Q9HD33 250 aaKnown RBP8.65□□□□□ -1.03
CD46-208ENST00000367042 ARFGEF1Q9Y6D6 1849 aa8.65□□□□□ -1.03
CD46-208ENST00000367042 EME2A4GXA9 379 aaPredicted RBP8.64□□□□□ -1.03
CD46-208ENST00000367042 C2orf71A6NGG8 1288 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 ZBED4O75132 1171 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 PROSCO94903 275 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 BAG2O95816 211 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 VIL1P09327 827 aaKnown RBP8.64□□□□□ -1.03
CD46-208ENST00000367042 IVDP26440 423 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 ADSSP30520 456 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 SLC1A1P43005 524 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 IRX1P78414 480 aaPredicted RBP8.64□□□□□ -1.03
CD46-208ENST00000367042 CCNG2Q16589 344 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 AP1ARQ63HQ0 302 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 RHBDF2Q6PJF5 856 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 PPFIBP2Q8ND30 876 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 MCEEQ96PE7 176 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 RAVER2Q9HCJ3 691 aaKnown RBP8.64□□□□□ -1.03
CD46-208ENST00000367042 CYP39A1Q9NYL5 469 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 SEPT9Q9UHD8 586 aaPredicted RBP8.64□□□□□ -1.03
CD46-208ENST00000367042 DPPA5A6NC42 116 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 PIK3CDO00329 1044 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 TP73O15350 636 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 SMNDC1O75940 238 aaKnown RBP eCLIP8.64□□□□□ -1.032e-8■□□□□ 9.9
CD46-208ENST00000367042 HAUS5O94927 633 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 TJP3O95049 919 aa8.64□□□□□ -1.03
CD46-208ENST00000367042 KITP10721 976 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms