RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KRT19P08727 400 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 GHRP10912 638 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 TNNT1P13805 278 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 SELPP16109 830 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 ZSCAN20P17040 1043 aaPredicted RBP14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 ATICP31939 592 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 GFPT1Q06210 699 aaPredicted RBP14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 BMS1Q14692 1282 aaKnown RBP14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 SPOPLQ6IQ16 392 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 ZNF662Q6ZS27 426 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 LRRC8DQ7L1W4 858 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 ZNF571Q7Z3V5 609 aaPredicted RBP14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 TSGA10Q9BZW7 698 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 APOBEC3GQ9HC16 384 aaKnown RBP14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 LZTFL1Q9NQ48 299 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 CNTN3Q9P232 1028 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 THEGQ9P2T0 379 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 PARP2Q9UGN5 583 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 HES2Q9Y543 173 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 NUB1Q9Y5A7 615 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 ATP8B3O60423 1300 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 SCN1AP35498 2009 aa14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 ZNF263O14978 683 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 KRT86O43790 486 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 CST3P01034 146 aaPredicted RBP14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 ITGB3P05106 788 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 KRT5P13647 590 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 CD52P31358 61 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 MAGEA1P43355 309 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 RAB27AP51159 221 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 PDE6CP51160 858 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 YWHAEP62258 255 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 MRPS5P82675 430 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 CYP27A1Q02318 531 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 LPIN1Q14693 890 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 TRIM60Q495X7 471 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 ZNF667Q5HYK9 610 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 C10orf76Q5T2E6 689 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 C1orf127Q8N9H9 656 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 BEST2Q8NFU1 509 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 BADQ92934 168 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 ELMO3Q96BJ8 720 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 FAXDC2Q96IV6 333 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 AGO3Q9H9G7 860 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 FAM105AQ9NUU6 356 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 DPP3Q9NY33 737 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 SIX4Q9UIU6 781 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 PADI3Q9ULW8 664 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 UBQLN1Q9UMX0 589 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 ATP11BQ9Y2G3 1177 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 PCDHB2Q9Y5E7 798 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 PCDHA13Q9Y5I0 950 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 MYH10P35580 1976 aa14.84□□□□□ -0.03
PDLIM5-203ENST00000359265 A0A087X0T9 212 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 KIF5CO60282 957 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 STAU1O95793 577 aaKnown RBP14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 FAM228BP0C875 321 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 P4HA1P13674 534 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 TNFAIP3P21580 790 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 POLR2BP30876 1174 aaKnown RBP14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 ARHGAP25P42331 645 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 BPIFB4P59827 614 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 RBP5P82980 135 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 TLE2Q04725 743 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 KIF5AQ12840 1032 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 CCDC122Q5T0U0 273 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 ALKAL1Q6UXT8 129 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 SMG8Q8ND04 991 aaKnown RBP14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 ARID3AQ99856 593 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 XYLT2Q9H1B5 865 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 HIPK3Q9H422 1215 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 VRTNQ9H8Y1 702 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 ADAMTS1Q9UHI8 967 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 PCDHB4Q9Y5E5 795 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 UMODL1Q5DID0 1318 aa14.83□□□□□ -0.04
PDLIM5-203ENST00000359265 MUC6Q6W4X9 2439 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 CYP26A1O43174 497 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 CLTBP09497 229 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 SKIP12755 728 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 ITGA4P13612 1032 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 KCNE1P15382 129 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 AKAP5P24588 427 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 ETF1P62495 437 aaKnown RBP14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 FAAP100Q0VG06 881 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 DSC3Q14574 896 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 XKR4Q5GH76 650 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 LNX1Q8TBB1 728 aaPredicted RBP14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 EPS8L1Q8TE68 723 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 AGPAT1Q99943 283 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 SYT11Q9BT88 431 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 TRAIPQ9BWF2 469 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 AGAP1Q9UPQ3 857 aa14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.82□□□□□ -0.04
PDLIM5-203ENST00000359265 MYO9BQ13459 2157 aa14.81□□□□□ -0.04
PDLIM5-203ENST00000359265 A0A0U1RQJ8 604 aa14.81□□□□□ -0.04
PDLIM5-203ENST00000359265 DDX3XO00571 662 aaKnown RBP eCLIP14.81□□□□□ -0.048e-10■■■□□ 15.6
PDLIM5-203ENST00000359265 PJA2O43164 708 aa14.81□□□□□ -0.04
PDLIM5-203ENST00000359265 BMP1P13497 986 aa14.81□□□□□ -0.04
PDLIM5-203ENST00000359265 CYP11B1P15538 503 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms