RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZHX2Q9Y6X8 837 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 PSMG1O95456 288 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 MYBL2P10244 700 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 NMT1P30419 496 aaKnown RBP12.68□□□□□ -0.38
COL12A1-202ENST00000345356 SCARF1Q14162 830 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 TFDP1Q14186 410 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 CWF19L1Q69YN2 538 aaKnown RBP12.68□□□□□ -0.38
COL12A1-202ENST00000345356 LRRC4Q9HBW1 653 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 ATAD3AQ9NVI7 634 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 WHRNQ9P202 907 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 BICRAQ9NZM4 1560 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 A0A0U1RQJ8 604 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 FAM196BA6NMK8 535 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 RIPK2O43353 540 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 SNX2O60749 519 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 BMP3P12645 472 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 ITGA4P13612 1032 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 ATP6V1C1P21283 382 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 TRIM25Q14258 630 aaKnown RBP12.68□□□□□ -0.38
COL12A1-202ENST00000345356 PDIA5Q14554 519 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 DEPDC1Q5TB30 811 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 ARHGEF40Q8TER5 1519 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 K7ERI5 159 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 LIN7AO14910 233 aaPredicted RBP12.68□□□□□ -0.38
COL12A1-202ENST00000345356 USP1O94782 785 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 ABL1P00519 1130 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 ACTR2P61160 394 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 IGBP1P78318 339 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 ANO4Q32M45 955 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 SLFN12LQ6IEE8 588 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 GJB7Q6PEY0 223 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 MIGA2Q7L4E1 593 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 MTRQ99707 1265 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 GRIP2Q9C0E4 1043 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 ATXN10Q9UBB4 475 aa12.68□□□□□ -0.38
COL12A1-202ENST00000345356 HNRNPRO43390 633 aaKnown RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 NT5C2P49902 561 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 PRELPP51888 382 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 MTHFD1LQ6UB35 978 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 CLVS1Q8IUQ0 354 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 CROCCP3Q8IVE0 287 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 BBS5Q8N3I7 341 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 ATG4AQ8WYN0 398 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 ARHGEF26Q96DR7 871 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 VPS50Q96JG6 964 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 SPATA17Q96L03 361 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 XDHP47989 1333 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 RALAP11233 206 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 TBXAS1P24557 533 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 HADHAP40939 763 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 EDRF1Q3B7T1 1238 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 ZNF667Q5HYK9 610 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 MROH9Q5TGP6 573 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 FAM20AQ96MK3 541 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 TMEM79Q9BSE2 394 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 MKNK1Q9BUB5 465 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 ZCWPW1Q9H0M4 648 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 MMADHCQ9H3L0 296 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 NAALADL1Q9UQQ1 740 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 ARHGEF5Q12774 1597 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 ZBTB5O15062 677 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 TBC1D12O60347 775 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 SNX3O60493 162 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 SMNDC1O75940 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 RUNX1T1Q06455 604 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 SURF1Q15526 300 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 FAM160B1Q5W0V3 765 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 TMED8Q6PL24 325 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 GLMNQ92990 594 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 TUBGCP3Q96CW5 907 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 NDNQ99608 321 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 BBS2Q9BXC9 721 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 TLR10Q9BXR5 811 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 RUBCNLQ9H714 662 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 IL1RL2Q9HB29 575 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 HSPBP1Q9NZL4 362 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 V9GYQ6 96 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 SERPINB5P36952 375 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 ISLR2Q6UXK2 745 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 BNC2Q6ZN30 1099 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 CD302Q8IX05 232 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 EZH1Q92800 747 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 PGM2Q96G03 612 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 BTG4Q9NY30 223 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 SCN3BQ9NY72 215 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 ARIH1Q9Y4X5 557 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 ATXN2Q99700 1313 aaKnown RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 LDHAP00338 332 aaKnown RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 SDC4P31431 198 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 CCDC60Q8IWA6 550 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-202ENST00000345356 KIAA1586Q9HCI6 787 aa12.67□□□□□ -0.38
COL12A1-202ENST00000345356 PDE2AO00408 941 aaPredicted RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 BCL10O95999 233 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 TAP1Q03518 808 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 CEP78Q5JTW2 689 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 NOL6Q9H6R4 1146 aaKnown RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 A1CFQ9NQ94 594 aaKnown RBP12.66□□□□□ -0.38
COL12A1-202ENST00000345356 ASAP1Q9ULH1 1129 aa12.66□□□□□ -0.38
COL12A1-202ENST00000345356 DISP1Q96F81 1524 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms