RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 STK32AQ8WU08 396 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 MFSD14AQ96MC6 490 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 NUDCD1Q96RS6 583 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 SAYSD1Q9NPB0 183 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 FBXO28Q9NVF7 368 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 ETAA1Q9NY74 926 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 CYP39A1Q9NYL5 469 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 SERPINA10Q9UK55 444 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 ZNF536O15090 1300 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 PRPF4O43172 522 aaKnown RBP eCLIP14.24□□□□□ -0.13
SKA3-202ENST00000314759 SMIM24O75264 130 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 CD58P19256 250 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 RPA3P35244 121 aaPredicted RBP14.24□□□□□ -0.13
SKA3-202ENST00000314759 RAB27AP51159 221 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 GCNT1Q02742 428 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 FASTKD3Q14CZ7 662 aaKnown RBP14.24□□□□□ -0.13
SKA3-202ENST00000314759 ZYXQ15942 572 aaKnown RBP14.24□□□□□ -0.13
SKA3-202ENST00000314759 HP1BP3Q5SSJ5 553 aaPredicted RBP14.24□□□□□ -0.13
SKA3-202ENST00000314759 PCNX4Q63HM2 1172 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 SLC39A4Q6P5W5 647 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 SLC30A9Q6PML9 568 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 AGGF1Q8N302 714 aaeCLIP14.24□□□□□ -0.13
SKA3-202ENST00000314759 TEX9Q8N6V9 391 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 TMC2Q8TDI7 906 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 CHURC1Q8WUH1 139 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 SLC7A6OSQ96CW6 309 aaPredicted RBP14.24□□□□□ -0.13
SKA3-202ENST00000314759 CFAP57Q96MR6 1250 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 FHDC1Q9C0D6 1143 aaPredicted RBP14.24□□□□□ -0.13
SKA3-202ENST00000314759 TRABDQ9H4I3 376 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.24□□□□□ -0.13
SKA3-202ENST00000314759 UBN1Q9NPG3 1134 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 POC1B-GALNT4F8VUJ3 575 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 ENTPD5O75356 428 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 NPR1P16066 1061 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 EPHB2P29323 1055 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 MXRA7P84157 204 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 SPARCL1Q14515 664 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 ZNF449Q6P9G9 518 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 RGS9BPQ6ZS82 235 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 MON1BQ7L1V2 547 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 LONP2Q86WA8 852 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 MAP4K3Q8IVH8 894 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 RHOT1Q8IXI2 618 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 C4orf33Q8N1A6 199 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 OGFOD1Q8N543 542 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 TSC22D3Q99576 134 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 PAPOLBQ9NRJ5 636 aaKnown RBP14.23□□□□□ -0.13
SKA3-202ENST00000314759 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.23□□□□□ -0.13
SKA3-202ENST00000314759 EXOC7Q9UPT5 735 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 ASTN2O75129 1339 aaPredicted RBP14.23□□□□□ -0.13
SKA3-202ENST00000314759 PSTPIP1O43586 416 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 AHCYL1O43865 530 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 EDF1O60869 148 aaKnown RBP14.23□□□□□ -0.13
SKA3-202ENST00000314759 ENTPD3O75355 529 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 LYPLA2O95372 231 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 CFHP08603 1231 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 ZSCAN5DPP0CG00 497 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 GJC1P36383 396 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 NSFP46459 744 aaKnown RBP14.23□□□□□ -0.13
SKA3-202ENST00000314759 NPTX2P47972 431 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 PAPOLAP51003 745 aaKnown RBP14.23□□□□□ -0.13
SKA3-202ENST00000314759 CYP24A1Q07973 514 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 NR1H3Q13133 447 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 PDK4Q16654 411 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 PLA2G4FQ68DD2 849 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 KATNAL2Q8IYT4 538 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 POMGNT1Q8WZA1 660 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 PRMT6Q96LA8 375 aaPredicted RBP14.23□□□□□ -0.13
SKA3-202ENST00000314759 FBXL18Q96ME1 805 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 TBC1D10AQ9BXI6 508 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 AGO4Q9HCK5 861 aaKnown RBP14.23□□□□□ -0.13
SKA3-202ENST00000314759 PCDHB2Q9Y5E7 798 aa14.23□□□□□ -0.13
SKA3-202ENST00000314759 SLX4Q8IY92 1834 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 CBX6O95503 412 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 CYP1A1P04798 512 aaPredicted RBP14.22□□□□□ -0.13
SKA3-202ENST00000314759 NEFHP12036 1026 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 ATP6V1C1P21283 382 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 PTDSS1P48651 473 aaKnown RBP14.22□□□□□ -0.13
SKA3-202ENST00000314759 HSD17B4P51659 736 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 RBBP5Q15291 538 aaKnown RBP14.22□□□□□ -0.13
SKA3-202ENST00000314759 SLC1A5Q15758 541 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 TKFCQ3LXA3 575 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 TDRPQ86YL5 185 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 INPP5DQ92835 1189 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 TRIM11Q96F44 468 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 AGBL1Q96MI9 1066 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 LBHD1Q9BQE6 289 aaPredicted RBP14.22□□□□□ -0.13
SKA3-202ENST00000314759 ADAM33Q9BZ11 813 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 DENND3A2RUS2 1198 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 DCTN3O75935 186 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 FGFR1P11362 822 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 KRT15P19012 456 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 GTF2H1P32780 548 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 DSG3P32926 999 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 SLC18A1P54219 525 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 CAPN12Q6ZSI9 719 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 C10orf82Q8WW14 230 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 FOXP3Q9BZS1 431 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 DNPEPQ9ULA0 475 aa14.22□□□□□ -0.13
SKA3-202ENST00000314759 USTQ9Y2C2 406 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms