RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CD58P19256 250 aa23.58■■□□□ 1.36
CCDC7-201ENST00000277657 ALKAL1Q6UXT8 129 aa23.58■■□□□ 1.36
CCDC7-201ENST00000277657 PEX26Q7Z412 305 aa23.58■■□□□ 1.36
CCDC7-201ENST00000277657 SERINC5Q86VE9 423 aa23.58■■□□□ 1.36
CCDC7-201ENST00000277657 NOA1Q8NC60 698 aaKnown RBP23.58■■□□□ 1.36
CCDC7-201ENST00000277657 KIF12Q96FN5 646 aa23.58■■□□□ 1.36
CCDC7-201ENST00000277657 DPP3Q9NY33 737 aa23.58■■□□□ 1.36
CCDC7-201ENST00000277657 CTTNBP2NLQ9P2B4 639 aa23.58■■□□□ 1.36
CCDC7-201ENST00000277657 POLIQ9UNA4 740 aa23.58■■□□□ 1.36
CCDC7-201ENST00000277657 GNRH1P01148 92 aa23.57■■□□□ 1.36
CCDC7-201ENST00000277657 H2AFXP16104 143 aaPredicted RBP23.57■■□□□ 1.36
CCDC7-201ENST00000277657 POLR2BP30876 1174 aaKnown RBP23.57■■□□□ 1.36
CCDC7-201ENST00000277657 ZBTB6Q15916 424 aa23.57■■□□□ 1.36
CCDC7-201ENST00000277657 WDR72Q3MJ13 1102 aa23.57■■□□□ 1.36
CCDC7-201ENST00000277657 UBXN11Q5T124 520 aa23.57■■□□□ 1.36
CCDC7-201ENST00000277657 RPAINQ86UA6 219 aa23.57■■□□□ 1.36
CCDC7-201ENST00000277657 ZNF606Q8WXB4 792 aa23.57■■□□□ 1.36
CCDC7-201ENST00000277657 CYFIP2Q96F07 1278 aa23.57■■□□□ 1.36
CCDC7-201ENST00000277657 NXF3Q9H4D5 531 aaKnown RBP23.57■■□□□ 1.36
CCDC7-201ENST00000277657 NXF1Q9UBU9 619 aaKnown RBP23.57■■□□□ 1.36
CCDC7-201ENST00000277657 DNAH12Q6ZR08 3092 aa23.57■■□□□ 1.36
CCDC7-201ENST00000277657 THAP12O43422 761 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 CFHP08603 1231 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 YARSP54577 528 aaKnown RBP23.56■■□□□ 1.36
CCDC7-201ENST00000277657 C11orf63Q6NUN7 778 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 SCARA5Q6ZMJ2 495 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 PXYLP1Q8TE99 480 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 ZNF653Q96CK0 615 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 HES6Q96HZ4 224 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 TRIM6Q9C030 488 aaPredicted RBP23.56■■□□□ 1.36
CCDC7-201ENST00000277657 CXCL16Q9H2A7 254 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 EPC1Q9H2F5 836 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 CNTN3Q9P232 1028 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 UVRAGQ9P2Y5 699 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 HES2Q9Y543 173 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 VEGFBP49765 207 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 GUCY2FP51841 1108 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 NOMO3P69849 1222 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 RBP5P82980 135 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 RSPH3Q86UC2 560 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 FAM228AQ86W67 206 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 MCOLN2Q8IZK6 566 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 ZMAT2Q96NC0 199 aaKnown RBP23.56■■□□□ 1.36
CCDC7-201ENST00000277657 AMFRQ9UKV5 643 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 AGAP1Q9UPQ3 857 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 TRPV2Q9Y5S1 764 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 CDY2AQ9Y6F7 541 aa23.56■■□□□ 1.36
CCDC7-201ENST00000277657 GRIN2DO15399 1336 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 ATMINO43313 823 aaPredicted RBP23.55■■□□□ 1.36
CCDC7-201ENST00000277657 RPLP2P05387 115 aaKnown RBP23.55■■□□□ 1.36
CCDC7-201ENST00000277657 NAA35Q5VZE5 725 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 FBXO38Q6PIJ6 1188 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 PCSK9Q8NBP7 692 aaKnown RBP23.55■■□□□ 1.36
CCDC7-201ENST00000277657 MSANTD4Q8NCY6 345 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 CPA5Q8WXQ8 436 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 WNT8BQ93098 351 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 TRIM11Q96F44 468 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 HPDLQ96IR7 371 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 SDCBP2Q9H190 292 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 PDCL3Q9H2J4 239 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 ANKZF1Q9H8Y5 726 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 CYP3A43Q9HB55 503 aa23.55■■□□□ 1.36
CCDC7-201ENST00000277657 AVENQ9NQS1 362 aaPredicted RBP23.55■■□□□ 1.36
CCDC7-201ENST00000277657 DDX20Q9UHI6 824 aaKnown RBP23.55■■□□□ 1.36
CCDC7-201ENST00000277657 NOC2LQ9Y3T9 749 aaKnown RBP23.55■■□□□ 1.36
CCDC7-201ENST00000277657 M0QZ92 97 aa23.54■■□□□ 1.36
CCDC7-201ENST00000277657 RECQL4O94761 1208 aa23.54■■□□□ 1.36
CCDC7-201ENST00000277657 MYBL1P10243 752 aa23.54■■□□□ 1.36
CCDC7-201ENST00000277657 NSFP46459 744 aaKnown RBP23.54■■□□□ 1.36
CCDC7-201ENST00000277657 CFAP221Q4G0U5 840 aa23.54■■□□□ 1.36
CCDC7-201ENST00000277657 FAM47CQ5HY64 1035 aa23.54■■□□□ 1.36
CCDC7-201ENST00000277657 CCDC181Q5TID7 509 aa23.54■■□□□ 1.36
CCDC7-201ENST00000277657 PPP1R2P3Q6NXS1 205 aa23.54■■□□□ 1.36
CCDC7-201ENST00000277657 MON1BQ7L1V2 547 aa23.54■■□□□ 1.36
CCDC7-201ENST00000277657 PBKQ96KB5 322 aa23.54■■□□□ 1.36
CCDC7-201ENST00000277657 PDCD11Q14690 1871 aaKnown RBP23.54■■□□□ 1.36
CCDC7-201ENST00000277657 P4HA1P13674 534 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 PAFAH1B1P43034 410 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 DNA2P51530 1060 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 XKR4Q5GH76 650 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 PHF13Q86YI8 300 aaPredicted RBP23.53■■□□□ 1.36
CCDC7-201ENST00000277657 SPATA4Q8NEY3 305 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 RAET1EQ8TD07 263 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 ZSWIM1Q9BR11 485 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 NUP85Q9BW27 656 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 SENP6Q9GZR1 1112 aaPredicted RBP23.53■■□□□ 1.36
CCDC7-201ENST00000277657 FAM124BQ9H5Z6 455 aaPredicted RBP23.53■■□□□ 1.36
CCDC7-201ENST00000277657 CNOT8Q9UFF9 292 aaKnown RBP23.53■■□□□ 1.36
CCDC7-201ENST00000277657 CHORDC1Q9UHD1 332 aaPredicted RBP23.53■■□□□ 1.36
CCDC7-201ENST00000277657 KCNK3O14649 394 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 RAP1GAPP47736 663 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 PDCL2Q8N4E4 241 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 ZNF564Q8TBZ8 553 aaPredicted RBP23.53■■□□□ 1.36
CCDC7-201ENST00000277657 UBE2Q2Q8WVN8 375 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 MS4A14Q96JA4 679 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 VCPIP1Q96JH7 1222 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 TSPAN18Q96SJ8 248 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 PARD6BQ9BYG5 372 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 SMYD3Q9H7B4 428 aa23.53■■□□□ 1.36
CCDC7-201ENST00000277657 EHD2Q9NZN4 543 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms