RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PROSCO94903 275 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 GLRA2P23416 452 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 OGDHQ02218 1023 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 MGAT5Q09328 741 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 PSMD6Q15008 389 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 SNRNP48Q6IEG0 339 aaKnown RBP10.75□□□□□ -0.69
COPB1-201ENST00000249923 GPRASP2Q96D09 838 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 SNF8Q96H20 258 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 JPH1Q9HDC5 661 aaPredicted RBP10.75□□□□□ -0.69
COPB1-201ENST00000249923 A1CFQ9NQ94 594 aaKnown RBP10.75□□□□□ -0.69
COPB1-201ENST00000249923 FGFR1OP2Q9NVK5 253 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 CYP39A1Q9NYL5 469 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 PARP2Q9UGN5 583 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 ASIC3Q9UHC3 531 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 ADAMTS5Q9UNA0 930 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 PCDHB2Q9Y5E7 798 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 CEP350Q5VT06 3117 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 TCRBV5S1A1TA0A578 114 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 EXTL3O43909 919 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 ZSCAN5DPP0CG00 497 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 ETS1P14921 441 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 FASTKD3Q14CZ7 662 aaKnown RBP10.74□□□□□ -0.69
COPB1-201ENST00000249923 MTERF2Q49AM1 385 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 EAPPQ56P03 285 aaPredicted RBP10.74□□□□□ -0.69
COPB1-201ENST00000249923 TRMT10CQ7L0Y3 403 aaKnown RBP10.74□□□□□ -0.69
COPB1-201ENST00000249923 NLRX1Q86UT6 975 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 ARHGEF2Q92974 986 aaKnown RBP10.74□□□□□ -0.69
COPB1-201ENST00000249923 SNX3O60493 162 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 DGAT1O75907 488 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 KRT10P13645 584 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 GBP1P32455 592 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 RTP1P59025 263 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 TMEM270Q6UE05 265 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 ARMC9Q7Z3E5 817 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 UBR7Q8N806 425 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 ACSF2Q96CM8 615 aaPredicted RBP10.74□□□□□ -0.69
COPB1-201ENST00000249923 R3HDMLQ9H3Y0 253 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 C17orf75Q9HAS0 396 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 C1orf112Q9NSG2 853 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 TPX2Q9ULW0 747 aaKnown RBP10.74□□□□□ -0.69
COPB1-201ENST00000249923 WDR90Q96KV7 1748 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 BRCA1P38398 1863 aaKnown RBP10.74□□□□□ -0.69
COPB1-201ENST00000249923 PI4K2BG5E9Z4 385 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 CST3P01034 146 aaPredicted RBP10.74□□□□□ -0.69
COPB1-201ENST00000249923 CCND2P30279 289 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 TNFSF9P41273 254 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 CUL2Q13617 745 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 EMC2Q15006 297 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 CCDC142Q17RM4 750 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 PLEKHA7Q6IQ23 1121 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 NIM1KQ8IY84 436 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 CCDC197Q8NCU1 140 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 SLC17A8Q8NDX2 589 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 C9orf72Q96LT7 481 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 PCYT2Q99447 389 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 CNTN6Q9UQ52 1028 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 BRCA2P51587 3418 aa10.74□□□□□ -0.69
COPB1-201ENST00000249923 TCP11X1B4DZS4 312 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 ZC3H11AO75152 810 aaKnown RBP eCLIP10.73□□□□□ -0.692e-10■■■■□ 19.9
COPB1-201ENST00000249923 LGR5O75473 907 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 ITIH2P19823 946 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 HMGCS2P54868 508 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 BACE1P56817 501 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 ZNF280AP59817 542 aaPredicted RBP10.73□□□□□ -0.69
COPB1-201ENST00000249923 CALCOCO2Q13137 446 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 BIRC2Q13490 618 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 HP1BP3Q5SSJ5 553 aaPredicted RBP10.73□□□□□ -0.69
COPB1-201ENST00000249923 FAM182AQ5T1J6 154 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 MIS18BP1Q6P0N0 1132 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 ABRAQ8N0Z2 381 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 BICD1Q96G01 975 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 TARS2Q9BW92 718 aaKnown RBP10.73□□□□□ -0.69
COPB1-201ENST00000249923 ACTR5Q9H9F9 607 aaPredicted RBP10.73□□□□□ -0.69
COPB1-201ENST00000249923 ATP6V0A4Q9HBG4 840 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 SLC9A2Q9UBY0 812 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 FBXO40Q9UH90 709 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 GRID1Q9ULK0 1009 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 SSC5DA1L4H1 1573 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 SPATA31C2B4DYI2 1134 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 DNAJC8O75937 253 aaPredicted RBP10.73□□□□□ -0.69
COPB1-201ENST00000249923 PDHA1P08559 390 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 ZNF132P52740 706 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 GAD2Q05329 585 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 RDM1Q8NG50 284 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 STAMBPL1Q96FJ0 436 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 RMDN2Q96LZ7 410 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 AGO2Q9UKV8 859 aaKnown RBP10.73□□□□□ -0.69
COPB1-201ENST00000249923 A0A0G2JMZ2 1700 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 LRRC37A2A6NM11 1700 aa10.73□□□□□ -0.69
COPB1-201ENST00000249923 MGRN1O60291 552 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 GHRP10912 638 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 PTPRAP18433 802 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 TNNI1P19237 187 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 PCK1P35558 622 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 PIK3CAP42336 1068 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 ELF3P78545 371 aaPredicted RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 ITIH4Q14624 930 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 WDR72Q3MJ13 1102 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 ACCSLQ4AC99 568 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms