RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 SKN7P38889 622 aa7.62□□□□□ -1.19
snR56snR56 SUM1P46676 1062 aa7.62□□□□□ -1.19
snR56snR56 YBL036CP38197 257 aa7.61□□□□□ -1.19
snR56snR56 NRD1P53617 575 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
snR56snR56 SLX8P40072 274 aa7.6□□□□□ -1.19
snR56snR56 JJJ2P46997 583 aa7.6□□□□□ -1.19
snR56snR56 HPC2Q01448 625 aa7.6□□□□□ -1.19
snR56snR56 LEU3P08638 886 aa7.59□□□□□ -1.19
snR56snR56 YMR187CQ03236 431 aa7.59□□□□□ -1.19
snR56snR56 IRE1P32361 1115 aa7.58□□□□□ -1.2
snR56snR56 UTP13Q05946 817 aaKnown RBP7.58□□□□□ -1.2
snR56snR56 GPM1P00950 247 aaKnown RBP7.57□□□□□ -1.2
snR56snR56 SHM1P37292 490 aaPredicted RBP7.57□□□□□ -1.2
snR56snR56 ALA1P40825 983 aaKnown RBP7.57□□□□□ -1.2
snR56snR56 HDA3Q06623 655 aa7.57□□□□□ -1.2
snR56snR56 MCX1P38323 520 aaPredicted RBP7.56□□□□□ -1.2
snR56snR56 SOH1P38633 127 aa7.56□□□□□ -1.2
snR56snR56 FPS1P23900 669 aa7.54□□□□□ -1.2
snR56snR56 RPN1P38764 993 aaKnown RBP7.54□□□□□ -1.2
snR56snR56 ATG3P40344 310 aa7.54□□□□□ -1.2
snR56snR56 YNR014WP53719 212 aa7.54□□□□□ -1.2
snR56snR56 PSH1Q12161 406 aa7.53□□□□□ -1.2
snR56snR56 YCK2P23292 546 aaKnown RBP7.52□□□□□ -1.21
snR56snR56 BRL1P38770 471 aa7.52□□□□□ -1.21
snR56snR56 PDC6P26263 563 aaKnown RBP7.51□□□□□ -1.21
snR56snR56 BIO2P32451 375 aa7.51□□□□□ -1.21
snR56snR56 MRPL16P38064 232 aa7.51□□□□□ -1.21
snR56snR56 YPP1P46951 817 aa7.51□□□□□ -1.21
snR56snR56 TFB3Q03290 321 aa7.51□□□□□ -1.21
snR56snR56 SBP1P10080 294 aaKnown RBP7.5□□□□□ -1.21
snR56snR56 SUP45P12385 437 aaKnown RBP7.5□□□□□ -1.21
snR56snR56 PKC1P24583 1151 aa7.5□□□□□ -1.21
snR56snR56 YPQ2Q06328 317 aa7.49□□□□□ -1.21
snR56snR56 RPS31P05759 152 aaKnown RBP7.48□□□□□ -1.21
snR56snR56 BOI2P39969 1040 aa7.48□□□□□ -1.21
snR56snR56 CBC2Q08920 208 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
snR56snR56 YDR215CQ12240 137 aa7.48□□□□□ -1.21
snR56snR56 STB3Q12427 513 aa7.47□□□□□ -1.21
snR56snR56 ENO2P00925 437 aaKnown RBP7.46□□□□□ -1.22
snR56snR56 PDC5P16467 563 aaKnown RBP7.46□□□□□ -1.22
snR56snR56 KNS1P32350 737 aaPredicted RBP7.46□□□□□ -1.22
snR56snR56 SPR3P41901 512 aa7.46□□□□□ -1.22
snR56snR56 SWI5P08153 709 aa7.44□□□□□ -1.22
snR56snR56 SLN1P39928 1220 aaPredicted RBP7.44□□□□□ -1.22
snR56snR56 YNL108CP53929 270 aa7.44□□□□□ -1.22
snR56snR56 TY1A-DR2Q03964 440 aaKnown RBP7.44□□□□□ -1.22
snR56snR56 LEU1P07264 779 aaKnown RBP7.43□□□□□ -1.22
snR56snR56 MET1P36150 593 aa7.43□□□□□ -1.22
snR56snR56 AMN1P38285 549 aaPredicted RBP7.42□□□□□ -1.22
snR56snR56 RIM21P48565 533 aa7.42□□□□□ -1.22
snR56snR56 RQC2Q12532 1038 aaKnown RBP7.42□□□□□ -1.22
snR56snR56 RDS2P19541 446 aaKnown RBP7.41□□□□□ -1.22
snR56snR56 AIM9P40053 627 aaKnown RBP7.4□□□□□ -1.22
snR56snR56 ALD2P47771 506 aa7.4□□□□□ -1.22
snR56snR56 MCA1Q08601 432 aa7.4□□□□□ -1.22
snR56snR56 MSC7P38694 644 aa7.39□□□□□ -1.23
snR56snR56 YNL165WP53891 406 aa7.39□□□□□ -1.23
snR56snR56 RPS6AP0CX37 236 aaKnown RBP7.37□□□□□ -1.23
snR56snR56 RPS6BP0CX38 236 aaPredicted RBP7.37□□□□□ -1.23
snR56snR56 MCM1P11746 286 aa7.37□□□□□ -1.23
snR56snR56 LSB6P42951 607 aa7.37□□□□□ -1.23
snR56snR56 RGP1P16664 663 aa7.36□□□□□ -1.23
snR56snR56 TAT1P38085 619 aa7.35□□□□□ -1.23
snR56snR56 NTH2P35172 780 aa7.34□□□□□ -1.23
snR56snR56 YFL034WP43564 1073 aa7.34□□□□□ -1.23
snR56snR56 PRY1P47032 299 aa7.34□□□□□ -1.23
snR56snR56 RPP1AP05318 106 aaPredicted RBP7.32□□□□□ -1.24
snR56snR56 MLF3P32047 452 aa7.31□□□□□ -1.24
snR56snR56 YTA6P40328 754 aa7.31□□□□□ -1.24
snR56snR56 MRX10Q05648 414 aa7.31□□□□□ -1.24
snR56snR56 GLT1Q12680 2145 aaKnown RBP7.31□□□□□ -1.24
snR56snR56 Q0182Q9ZZW1 134 aa7.29□□□□□ -1.24
snR56snR56 YJL007CP47080 104 aa7.28□□□□□ -1.24
snR56snR56 YPL034WQ03083 165 aa7.28□□□□□ -1.24
snR56snR56 PDI1P17967 522 aaKnown RBP7.27□□□□□ -1.25
snR56snR56 TPS3P38426 1054 aaKnown RBP7.27□□□□□ -1.25
snR56snR56 TSC13Q99190 310 aa7.27□□□□□ -1.25
snR56snR56 ENO1P00924 437 aaKnown RBP7.26□□□□□ -1.25
snR56snR56 HEH2Q03281 663 aa7.26□□□□□ -1.25
snR56snR56 PRK1P40494 810 aa7.24□□□□□ -1.25
snR56snR56 BUD9P53226 547 aa7.24□□□□□ -1.25
snR56snR56 NHA1Q99271 985 aa7.24□□□□□ -1.25
snR56snR56 PEP12P32854 288 aa7.23□□□□□ -1.25
snR56snR56 PGM2P37012 569 aaKnown RBP7.23□□□□□ -1.25
snR56snR56 ALG14P38242 237 aa7.23□□□□□ -1.25
snR56snR56 CYT1P07143 309 aa7.22□□□□□ -1.25
snR56snR56 SKP1P52286 194 aa7.22□□□□□ -1.25
snR56snR56 MAC1P35192 417 aa7.21□□□□□ -1.26
snR56snR56 MTO1P53070 669 aa7.21□□□□□ -1.26
snR56snR56 BIM1P40013 344 aa7.2□□□□□ -1.26
snR56snR56 ATG32P40458 529 aa7.2□□□□□ -1.26
snR56snR56 UTP4Q06679 776 aaKnown RBP7.2□□□□□ -1.26
snR56snR56 NAR1P23503 491 aaKnown RBP7.19□□□□□ -1.26
snR56snR56 ALO1P54783 526 aaKnown RBP7.19□□□□□ -1.26
snR56snR56 TIF1P10081 395 aaKnown RBP7.18□□□□□ -1.26
snR56snR56 GIS4Q04233 774 aa7.18□□□□□ -1.26
snR56snR56 RTG2P32608 588 aaKnown RBP7.17□□□□□ -1.26
snR56snR56 NCL1P38205 684 aaKnown RBP7.17□□□□□ -1.26
snR56snR56 INP52P50942 1183 aa7.17□□□□□ -1.26
snR56snR56 ACS2P52910 683 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms