RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 TY1A-AP0CX57 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-PR1P0CX58 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-ORP0CX59 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-PR2P0CX60 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-DR5P0CX65 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-ER2P0CX66 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-GR3P0CX67 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-LR1P0CX68 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-MR2P0CX69 440 aa3.74□□□□□ -1.81
snR43snR43 SEC2P17065 759 aa3.74□□□□□ -1.81
snR43snR43 PRP5P21372 849 aaPredicted RBP3.74□□□□□ -1.81
snR43snR43 YJU3P28321 313 aa3.74□□□□□ -1.81
snR43snR43 NPR2P39923 615 aa3.74□□□□□ -1.81
snR43snR43 DOT5P40553 215 aa3.74□□□□□ -1.81
snR43snR43 TY1A-JR2P47099 440 aa3.74□□□□□ -1.81
snR43snR43 CSN12P47130 423 aa3.74□□□□□ -1.81
snR43snR43 TY1A-DR1Q03856 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-ML1Q04706 440 aaKnown RBP3.74□□□□□ -1.81
snR43snR43 TY1A-BRQ12217 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-NL2Q12470 440 aa3.74□□□□□ -1.81
snR43snR43 TY1A-GR2Q12485 440 aa3.74□□□□□ -1.81
snR43snR43 PSK1P31374 1356 aa3.74□□□□□ -1.81
snR43snR43 SSA2P10592 639 aaKnown RBP3.73□□□□□ -1.81
snR43snR43 SLY41P22215 453 aa3.73□□□□□ -1.81
snR43snR43 CLB5P30283 435 aa3.73□□□□□ -1.81
snR43snR43 TAF5P38129 798 aa3.73□□□□□ -1.81
snR43snR43 PAF1P38351 445 aa3.73□□□□□ -1.81
snR43snR43 ALD2P47771 506 aa3.73□□□□□ -1.81
snR43snR43 ROM2P51862 1356 aaKnown RBP3.73□□□□□ -1.81
snR43snR43 YEF3P16521 1044 aaKnown RBP3.72□□□□□ -1.81
snR43snR43 CTH1P47976 325 aa3.72□□□□□ -1.81
snR43snR43 MSB3P48566 633 aaPredicted RBP3.72□□□□□ -1.81
snR43snR43 LYS4P49367 693 aaPredicted RBP3.72□□□□□ -1.81
snR43snR43 FOX2Q02207 900 aaKnown RBP3.72□□□□□ -1.81
snR43snR43 PKH3Q03306 898 aaPredicted RBP3.72□□□□□ -1.81
snR43snR43 GYP1Q08484 637 aa3.72□□□□□ -1.81
snR43snR43 MMP1Q12372 583 aa3.72□□□□□ -1.81
snR43snR43 ADE6P38972 1358 aaKnown RBP3.72□□□□□ -1.81
snR43snR43 PRT1P06103 763 aaKnown RBP3.71□□□□□ -1.82
snR43snR43 PKC1P24583 1151 aa3.71□□□□□ -1.82
snR43snR43 NAP1P25293 417 aaKnown RBP3.71□□□□□ -1.82
snR43snR43 RRN7P40992 514 aa3.71□□□□□ -1.82
snR43snR43 TFB3Q03290 321 aa3.71□□□□□ -1.82
snR43snR43 RSF2P46974 1380 aa3.71□□□□□ -1.82
snR43snR43 SIT4P20604 311 aa3.7□□□□□ -1.82
snR43snR43 HST2P53686 357 aa3.7□□□□□ -1.82
snR43snR43 YNL115CP53925 644 aa3.7□□□□□ -1.82
snR43snR43 RCM1P53972 490 aa3.7□□□□□ -1.82
snR43snR43 RAS1P01119 309 aa3.69□□□□□ -1.82
snR43snR43 ARG8P18544 423 aa3.69□□□□□ -1.82
snR43snR43 PPH3P32345 308 aa3.69□□□□□ -1.82
snR43snR43 PAC1P39946 494 aaKnown RBP3.69□□□□□ -1.82
snR43snR43 YJL181WP46987 611 aa3.69□□□□□ -1.82
snR43snR43 TUB4P53378 473 aa3.69□□□□□ -1.82
snR43snR43 TRM1P15565 570 aaKnown RBP3.68□□□□□ -1.82
snR43snR43 PRP40P33203 583 aaKnown RBP3.68□□□□□ -1.82
snR43snR43 PRP43P53131 767 aaKnown RBP3.68□□□□□ -1.82
snR43snR43 TAF8Q03750 510 aa3.68□□□□□ -1.82
snR43snR43 AGE1Q04412 482 aa3.68□□□□□ -1.82
snR43snR43 SLM3Q12093 417 aa3.68□□□□□ -1.82
snR43snR43 TCB1Q12466 1186 aa3.68□□□□□ -1.82
snR43snR43 URB1P34241 1764 aaKnown RBP3.68□□□□□ -1.82
snR43snR43 SDH2P21801 266 aa3.67□□□□□ -1.82
snR43snR43 YKR075CP36155 307 aa3.67□□□□□ -1.82
snR43snR43 ESL2P36168 1195 aa3.67□□□□□ -1.82
snR43snR43 SAS4Q04003 481 aa3.67□□□□□ -1.82
snR43snR43 LAM6Q08001 693 aa3.67□□□□□ -1.82
snR43snR43 RAD59Q12223 238 aa3.67□□□□□ -1.82
snR43snR43 AMS1P22855 1083 aa3.66□□□□□ -1.82
snR43snR43 SPT16P32558 1035 aaKnown RBP3.66□□□□□ -1.82
snR43snR43 SPT7P35177 1332 aa3.66□□□□□ -1.82
snR43snR43 COBP00163 385 aa3.65□□□□□ -1.83
snR43snR43 YKL133CP36066 463 aa3.65□□□□□ -1.83
snR43snR43 RTF1P53064 558 aa3.65□□□□□ -1.83
snR43snR43 TBF1Q02457 562 aa3.65□□□□□ -1.83
snR43snR43 YDL206WQ12424 762 aa3.65□□□□□ -1.83
snR43snR43 TY4B-HP0C2J7 1802 aa3.65□□□□□ -1.83
snR43snR43 TY4B-JP47024 1803 aa3.65□□□□□ -1.83
snR43snR43 BRL1P38770 471 aa3.64□□□□□ -1.83
snR43snR43 NOP7P53261 605 aaKnown RBP3.64□□□□□ -1.83
snR43snR43 PUS6P53294 404 aa3.64□□□□□ -1.83
snR43snR43 FRK1Q03002 865 aaPredicted RBP3.64□□□□□ -1.83
snR43snR43 RSC30P38781 883 aa3.63□□□□□ -1.83
snR43snR43 CST6P40535 587 aa3.63□□□□□ -1.83
snR43snR43 YJL007CP47080 104 aa3.63□□□□□ -1.83
snR43snR43 ALD3P54114 506 aa3.63□□□□□ -1.83
snR43snR43 HPC2Q01448 625 aa3.63□□□□□ -1.83
snR43snR43 PUS5Q06244 254 aa3.63□□□□□ -1.83
snR43snR43 FKS3Q04952 1785 aa3.63□□□□□ -1.83
snR43snR43 TRK1P12685 1235 aa3.62□□□□□ -1.83
snR43snR43 YBL036CP38197 257 aa3.62□□□□□ -1.83
snR43snR43 XKS1P42826 600 aa3.62□□□□□ -1.83
snR43snR43 MTR4P47047 1073 aaKnown RBP3.62□□□□□ -1.83
snR43snR43 RGA2Q06407 1009 aa3.62□□□□□ -1.83
snR43snR43 YRF1-3P0CX14 1859 aa3.62□□□□□ -1.83
snR43snR43 YRF1-7P0CX15 1859 aa3.62□□□□□ -1.83
snR43snR43 YRF1-6P53819 1859 aa3.62□□□□□ -1.83
snR43snR43 YRF1-4O13559 1382 aa3.62□□□□□ -1.83
snR43snR43 LEU2P04173 364 aaPredicted RBP3.61□□□□□ -1.83
snR43snR43 PDC1P06169 563 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms