RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W YOL036WQ08206 761 aa2.22□□□□□ -2.05
SKI3YPR189W PNP1Q05788 311 aa2.22□□□□□ -2.05
SKI3YPR189W MPH3P0CE00 602 aa2.21□□□□□ -2.06
SKI3YPR189W SEC8P32855 1065 aa2.21□□□□□ -2.06
SKI3YPR189W SLI15P38283 698 aa2.21□□□□□ -2.06
SKI3YPR189W RTS3P53289 263 aa2.21□□□□□ -2.06
SKI3YPR189W PUS6P53294 404 aa2.21□□□□□ -2.06
SKI3YPR189W YNL115CP53925 644 aa2.21□□□□□ -2.06
SKI3YPR189W RRP5Q05022 1729 aaKnown RBP2.21□□□□□ -2.06
SKI3YPR189W SIT4P20604 311 aa2.21□□□□□ -2.06
SKI3YPR189W YKL091CP33324 310 aaKnown RBP2.21□□□□□ -2.06
SKI3YPR189W RRP14P36080 434 aaKnown RBP2.21□□□□□ -2.06
SKI3YPR189W SPC42P36094 363 aa2.21□□□□□ -2.06
SKI3YPR189W YCK3P39962 524 aa2.21□□□□□ -2.06
SKI3YPR189W CWC24P53769 259 aa2.21□□□□□ -2.06
SKI3YPR189W NAF1P53919 492 aaKnown RBP2.21□□□□□ -2.06
SKI3YPR189W AI4P03878 556 aa2.21□□□□□ -2.06
SKI3YPR189W TOP1P04786 769 aa2.21□□□□□ -2.06
SKI3YPR189W VAN1P23642 535 aa2.21□□□□□ -2.06
SKI3YPR189W NMD2P38798 1089 aaKnown RBP2.21□□□□□ -2.06
SKI3YPR189W KEX2P13134 814 aa2.2□□□□□ -2.06
SKI3YPR189W ATE1P16639 503 aa2.2□□□□□ -2.06
SKI3YPR189W MET1P36150 593 aa2.2□□□□□ -2.06
SKI3YPR189W OCA5P38738 679 aa2.2□□□□□ -2.06
SKI3YPR189W CST6P40535 587 aa2.2□□□□□ -2.06
SKI3YPR189W RNH70P53331 553 aa2.2□□□□□ -2.06
SKI3YPR189W GUT2P32191 649 aa2.2□□□□□ -2.06
SKI3YPR189W PEP12P32854 288 aa2.2□□□□□ -2.06
SKI3YPR189W VAC8P39968 578 aa2.2□□□□□ -2.06
SKI3YPR189W DAN4P47179 1161 aa2.2□□□□□ -2.06
SKI3YPR189W WSC3Q12215 556 aa2.2□□□□□ -2.06
SKI3YPR189W YDL206WQ12424 762 aa2.2□□□□□ -2.06
SKI3YPR189W SPT2P06843 333 aaPredicted RBP2.2□□□□□ -2.06
SKI3YPR189W HAP4P14064 554 aa2.2□□□□□ -2.06
SKI3YPR189W TEC1P18412 486 aa2.2□□□□□ -2.06
SKI3YPR189W BUD31P25337 157 aaPredicted RBP2.2□□□□□ -2.06
SKI3YPR189W YAF9P53930 226 aa2.2□□□□□ -2.06
SKI3YPR189W STE20Q03497 939 aaKnown RBP2.2□□□□□ -2.06
SKI3YPR189W SOH1P38633 127 aa2.2□□□□□ -2.06
SKI3YPR189W TRS33Q99394 268 aa2.2□□□□□ -2.06
SKI3YPR189W PDI1P17967 522 aaKnown RBP2.19□□□□□ -2.06
SKI3YPR189W YEL023CP39992 682 aa2.19□□□□□ -2.06
SKI3YPR189W YJR008WP47085 338 aa2.19□□□□□ -2.06
SKI3YPR189W CWH41P53008 833 aa2.19□□□□□ -2.06
SKI3YPR189W ATG1P53104 897 aa2.19□□□□□ -2.06
SKI3YPR189W ALD6P54115 500 aaKnown RBP2.19□□□□□ -2.06
SKI3YPR189W YOR131CQ12486 218 aa2.19□□□□□ -2.06
SKI3YPR189W YOL098CQ12496 1037 aa2.19□□□□□ -2.06
SKI3YPR189W SKI3P17883 1432 aaKnown RBP2.19□□□□□ -2.06
SKI3YPR189W PHO87P25360 923 aa2.19□□□□□ -2.06
SKI3YPR189W MDJ2P42834 146 aa2.19□□□□□ -2.06
SKI3YPR189W OSW7P43611 510 aa2.19□□□□□ -2.06
SKI3YPR189W RTF1P53064 558 aa2.19□□□□□ -2.06
SKI3YPR189W FAR11P53917 953 aa2.19□□□□□ -2.06
SKI3YPR189W PUF6Q04373 656 aaKnown RBP2.19□□□□□ -2.06
SKI3YPR189W FKS3Q04952 1785 aa2.19□□□□□ -2.06
SKI3YPR189W GCD11P32481 527 aaKnown RBP2.19□□□□□ -2.06
SKI3YPR189W PPX1P38698 397 aa2.19□□□□□ -2.06
SKI3YPR189W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SKI3YPR189W ATG36P46983 293 aa2.19□□□□□ -2.06
SKI3YPR189W DOS2P54858 310 aa2.19□□□□□ -2.06
SKI3YPR189W NUT2Q06213 157 aa2.19□□□□□ -2.06
SKI3YPR189W PUS5Q06244 254 aa2.19□□□□□ -2.06
SKI3YPR189W WRS1Q12109 432 aaKnown RBP2.19□□□□□ -2.06
SKI3YPR189W NUM1Q00402 2748 aa2.18□□□□□ -2.06
SKI3YPR189W SRS2P12954 1174 aa2.18□□□□□ -2.06
SKI3YPR189W RDS2P19541 446 aaKnown RBP2.18□□□□□ -2.06
SKI3YPR189W NUD1P32336 851 aa2.18□□□□□ -2.06
SKI3YPR189W TPS3P38426 1054 aaKnown RBP2.18□□□□□ -2.06
SKI3YPR189W QDR1P40475 563 aa2.18□□□□□ -2.06
SKI3YPR189W ACS2P52910 683 aaKnown RBP2.18□□□□□ -2.06
SKI3YPR189W DUS1P53759 423 aaKnown RBP2.18□□□□□ -2.06
SKI3YPR189W CWC15Q03772 175 aaKnown RBP2.18□□□□□ -2.06
SKI3YPR189W GAS4Q08271 471 aa2.18□□□□□ -2.06
SKI3YPR189W WHI5Q12416 295 aa2.18□□□□□ -2.06
SKI3YPR189W URB1P34241 1764 aaKnown RBP2.18□□□□□ -2.06
SKI3YPR189W RSC30P38781 883 aa2.18□□□□□ -2.06
SKI3YPR189W BOL3P39724 118 aa2.18□□□□□ -2.06
SKI3YPR189W CLN2P20438 545 aa2.17□□□□□ -2.06
SKI3YPR189W TSR4P25040 408 aa2.17□□□□□ -2.06
SKI3YPR189W MCM2P29469 868 aa2.17□□□□□ -2.06
SKI3YPR189W FYV10P40492 516 aa2.17□□□□□ -2.06
SKI3YPR189W FOX2Q02207 900 aaKnown RBP2.17□□□□□ -2.06
SKI3YPR189W DPL1Q05567 589 aa2.17□□□□□ -2.06
SKI3YPR189W ALR1Q08269 859 aa2.17□□□□□ -2.06
SKI3YPR189W CDC53Q12018 815 aaKnown RBP2.17□□□□□ -2.06
SKI3YPR189W TSC11P40061 1430 aa2.17□□□□□ -2.06
SKI3YPR189W MIP1P15801 1254 aa2.17□□□□□ -2.06
SKI3YPR189W YFL034WP43564 1073 aa2.17□□□□□ -2.06
SKI3YPR189W ERF2Q06551 359 aa2.17□□□□□ -2.06
SKI3YPR189W GAP1P19145 602 aaPredicted RBP2.17□□□□□ -2.06
SKI3YPR189W TGL3P40308 642 aa2.17□□□□□ -2.06
SKI3YPR189W RRP15Q06511 250 aaPredicted RBP2.17□□□□□ -2.06
SKI3YPR189W FPR3P38911 411 aaKnown RBP2.17□□□□□ -2.06
SKI3YPR189W SUB1P54000 292 aaKnown RBP2.17□□□□□ -2.06
SKI3YPR189W SPR3P41901 512 aa2.16□□□□□ -2.06
SKI3YPR189W ROM1P53046 1155 aa2.16□□□□□ -2.06
SKI3YPR189W ALD3P54114 506 aa2.16□□□□□ -2.06
SKI3YPR189W ISU2Q12056 156 aa2.16□□□□□ -2.06
SKI3YPR189W TSC13Q99190 310 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms