RNA–Protein interactions for RNA: YPL253C

VIK1, Transcript of Protein that forms a kinesin-14 heterodimeric motor with Kar3p, yeast

Gene VIK1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIK1	YPL253C	FPS1	P23900	669 aa		4.21	□□□□□ -1.74
VIK1	YPL253C	LSB6	P42951	607 aa		4.21	□□□□□ -1.74
VIK1	YPL253C	APL6	P46682	809 aa		4.21	□□□□□ -1.74
VIK1	YPL253C	ISF1	P32488	338 aa		4.2	□□□□□ -1.74
VIK1	YPL253C	UTR2	P32623	467 aa		4.2	□□□□□ -1.74
VIK1	YPL253C	SHM1	P37292	490 aa	Predicted RBP	4.2	□□□□□ -1.74
VIK1	YPL253C	JJJ2	P46997	583 aa		4.2	□□□□□ -1.74
VIK1	YPL253C	IRE1	P32361	1115 aa		4.19	□□□□□ -1.74
VIK1	YPL253C	HAL5	P38970	855 aa	Known RBP	4.19	□□□□□ -1.74
VIK1	YPL253C	MRPL16	P38064	232 aa		4.19	□□□□□ -1.74
VIK1	YPL253C	EMP47	P43555	445 aa		4.19	□□□□□ -1.74
VIK1	YPL253C	SUM1	P46676	1062 aa		4.19	□□□□□ -1.74
VIK1	YPL253C	ALA1	P40825	983 aa	Known RBP	4.18	□□□□□ -1.74
VIK1	YPL253C	PDC5	P16467	563 aa	Known RBP	4.17	□□□□□ -1.74
VIK1	YPL253C	KNS1	P32350	737 aa	Predicted RBP	4.17	□□□□□ -1.74
VIK1	YPL253C	TAT1	P38085	619 aa		4.17	□□□□□ -1.74
VIK1	YPL253C	PRY1	P47032	299 aa		4.17	□□□□□ -1.74
VIK1	YPL253C	PSH1	Q12161	406 aa		4.17	□□□□□ -1.74
VIK1	YPL253C	MET1	P36150	593 aa		4.16	□□□□□ -1.74
VIK1	YPL253C	SPR3	P41901	512 aa		4.16	□□□□□ -1.74
VIK1	YPL253C	SSA2	P10592	639 aa	Known RBP	4.15	□□□□□ -1.74
VIK1	YPL253C	TBS1	P38114	1094 aa		4.15	□□□□□ -1.74
VIK1	YPL253C	MRX12	P47084	519 aa		4.15	□□□□□ -1.74
VIK1	YPL253C	PDC6	P26263	563 aa	Known RBP	4.15	□□□□□ -1.75
VIK1	YPL253C	SLX8	P40072	274 aa		4.15	□□□□□ -1.75
VIK1	YPL253C	MCM16	Q12262	181 aa		4.15	□□□□□ -1.75
VIK1	YPL253C	MAC1	P35192	417 aa		4.14	□□□□□ -1.75
VIK1	YPL253C	TY1A-DR2	Q03964	440 aa	Known RBP	4.14	□□□□□ -1.75
VIK1	YPL253C	STB3	Q12427	513 aa		4.14	□□□□□ -1.75
VIK1	YPL253C	RPS31	P05759	152 aa	Known RBP	4.13	□□□□□ -1.75
VIK1	YPL253C	ALO1	P54783	526 aa	Known RBP	4.13	□□□□□ -1.75
VIK1	YPL253C	YPL034W	Q03083	165 aa		4.13	□□□□□ -1.75
VIK1	YPL253C	HDA3	Q06623	655 aa		4.13	□□□□□ -1.75
VIK1	YPL253C	YDJ1	P25491	409 aa	Known RBP	4.12	□□□□□ -1.75
VIK1	YPL253C	MSC7	P38694	644 aa		4.11	□□□□□ -1.75
VIK1	YPL253C	CSE4	P36012	229 aa		4.11	□□□□□ -1.75
VIK1	YPL253C	INP52	P50942	1183 aa		4.1	□□□□□ -1.75
VIK1	YPL253C	SOH1	P38633	127 aa		4.09	□□□□□ -1.75
VIK1	YPL253C	YPQ2	Q06328	317 aa		4.09	□□□□□ -1.76
VIK1	YPL253C	LEU1	P07264	779 aa	Known RBP	4.07	□□□□□ -1.76
VIK1	YPL253C	OMA1	P36163	345 aa		4.07	□□□□□ -1.76
VIK1	YPL253C	ALD2	P47771	506 aa		4.07	□□□□□ -1.76
VIK1	YPL253C	HPC2	Q01448	625 aa		4.07	□□□□□ -1.76
VIK1	YPL253C	KIN1	P13185	1064 aa		4.07	□□□□□ -1.76
VIK1	YPL253C	YNL165W	P53891	406 aa		4.07	□□□□□ -1.76
VIK1	YPL253C	UTP13	Q05946	817 aa	Known RBP	4.07	□□□□□ -1.76
VIK1	YPL253C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VIK1	YPL253C	SPT5	P27692	1063 aa	Known RBP	4.06	□□□□□ -1.76
VIK1	YPL253C	GUA1	P38625	525 aa	Known RBP	4.06	□□□□□ -1.76
VIK1	YPL253C	IRC24	P40580	263 aa		4.06	□□□□□ -1.76
VIK1	YPL253C	BUD9	P53226	547 aa		4.06	□□□□□ -1.76
VIK1	YPL253C	TPS3	P38426	1054 aa	Known RBP	4.05	□□□□□ -1.76
VIK1	YPL253C	SWI5	P08153	709 aa		4.05	□□□□□ -1.76
VIK1	YPL253C	PGM2	P37012	569 aa	Known RBP	4.04	□□□□□ -1.76
VIK1	YPL253C	RGP1	P16664	663 aa		4.03	□□□□□ -1.76
VIK1	YPL253C	NHA1	Q99271	985 aa		4.03	□□□□□ -1.76
VIK1	YPL253C	YBL036C	P38197	257 aa		4.03	□□□□□ -1.76
VIK1	YPL253C	ALG14	P38242	237 aa		4.01	□□□□□ -1.77
VIK1	YPL253C	ATG3	P40344	310 aa		4.01	□□□□□ -1.77
VIK1	YPL253C	PGM1	P33401	570 aa	Known RBP	4.01	□□□□□ -1.77
VIK1	YPL253C	TFB3	Q03290	321 aa		4.01	□□□□□ -1.77
VIK1	YPL253C	AIM9	P40053	627 aa	Known RBP	4	□□□□□ -1.77
VIK1	YPL253C	AVT1	P47082	602 aa		4	□□□□□ -1.77
VIK1	YPL253C	GAS5	Q08193	484 aa		4	□□□□□ -1.77
VIK1	YPL253C	AI3	P03877	415 aa		3.99	□□□□□ -1.77
VIK1	YPL253C	SUP45	P12385	437 aa	Known RBP	3.99	□□□□□ -1.77
VIK1	YPL253C	NAR1	P23503	491 aa	Known RBP	3.99	□□□□□ -1.77
VIK1	YPL253C	MLF3	P32047	452 aa		3.99	□□□□□ -1.77
VIK1	YPL253C	PRK1	P40494	810 aa		3.99	□□□□□ -1.77
VIK1	YPL253C	RPP1A	P05318	106 aa	Predicted RBP	3.99	□□□□□ -1.77
VIK1	YPL253C	BIO2	P32451	375 aa		3.99	□□□□□ -1.77
VIK1	YPL253C	ENO2	P00925	437 aa	Known RBP	3.98	□□□□□ -1.77
VIK1	YPL253C	RPS6A	P0CX37	236 aa	Known RBP	3.98	□□□□□ -1.77
VIK1	YPL253C	RPS6B	P0CX38	236 aa	Predicted RBP	3.98	□□□□□ -1.77
VIK1	YPL253C	Q0182	Q9ZZW1	134 aa		3.98	□□□□□ -1.77
VIK1	YPL253C	MCM1	P11746	286 aa		3.97	□□□□□ -1.77
VIK1	YPL253C	RDS2	P19541	446 aa	Known RBP	3.97	□□□□□ -1.77
VIK1	YPL253C	PKC1	P24583	1151 aa		3.97	□□□□□ -1.77
VIK1	YPL253C	YPP1	P46951	817 aa		3.97	□□□□□ -1.77
VIK1	YPL253C	HEH2	Q03281	663 aa		3.97	□□□□□ -1.77
VIK1	YPL253C	GIS4	Q04233	774 aa		3.97	□□□□□ -1.77
VIK1	YPL253C	RQC2	Q12532	1038 aa	Known RBP	3.97	□□□□□ -1.77
VIK1	YPL253C	SAC7	P17121	654 aa		3.97	□□□□□ -1.77
VIK1	YPL253C	NTH2	P35172	780 aa		3.96	□□□□□ -1.78
VIK1	YPL253C	YTA6	P40328	754 aa		3.96	□□□□□ -1.78
VIK1	YPL253C	YNL108C	P53929	270 aa		3.96	□□□□□ -1.78
VIK1	YPL253C	TRP3	P00937	484 aa		3.95	□□□□□ -1.78
VIK1	YPL253C	RRM3	P38766	723 aa		3.95	□□□□□ -1.78
VIK1	YPL253C	YKR073C	P36153	106 aa		3.95	□□□□□ -1.78
VIK1	YPL253C	RIM21	P48565	533 aa		3.95	□□□□□ -1.78
VIK1	YPL253C	ARI1	P53111	347 aa	Known RBP	3.95	□□□□□ -1.78
VIK1	YPL253C	SKP1	P52286	194 aa		3.93	□□□□□ -1.78
VIK1	YPL253C	MTO1	P53070	669 aa		3.93	□□□□□ -1.78
VIK1	YPL253C	BRL1	P38770	471 aa		3.92	□□□□□ -1.78
VIK1	YPL253C	YNR040W	P53736	256 aa		3.92	□□□□□ -1.78
VIK1	YPL253C	MED7	Q08278	222 aa		3.92	□□□□□ -1.78
VIK1	YPL253C	MRP10	O75012	95 aa		3.91	□□□□□ -1.78
VIK1	YPL253C	LEU3	P08638	886 aa		3.91	□□□□□ -1.78
VIK1	YPL253C	PDI1	P17967	522 aa	Known RBP	3.91	□□□□□ -1.78
VIK1	YPL253C	SFA1	P32771	386 aa		3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 103 ms