RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE1YPL176C SRP40P32583 406 aaPredicted RBP5.71□□□□□ -1.5
TRE1YPL176C SEC8P32855 1065 aa5.71□□□□□ -1.5
TRE1YPL176C RRN7P40992 514 aa5.71□□□□□ -1.5
TRE1YPL176C OYE2Q03558 400 aaKnown RBP5.71□□□□□ -1.5
TRE1YPL176C YPR097WQ06839 1073 aa5.71□□□□□ -1.5
TRE1YPL176C PDC1P06169 563 aaKnown RBP5.7□□□□□ -1.5
TRE1YPL176C RDS2P19541 446 aaKnown RBP5.7□□□□□ -1.5
TRE1YPL176C WHI5Q12416 295 aa5.7□□□□□ -1.5
TRE1YPL176C DNM1P54861 757 aa5.7□□□□□ -1.5
TRE1YPL176C TMA64Q04600 565 aaKnown RBP5.7□□□□□ -1.5
TRE1YPL176C MCM16Q12262 181 aa5.7□□□□□ -1.5
TRE1YPL176C RPS0AP32905 252 aaKnown RBP5.69□□□□□ -1.5
TRE1YPL176C VAC8P39968 578 aa5.69□□□□□ -1.5
TRE1YPL176C NOP2P40991 618 aaKnown RBP5.69□□□□□ -1.5
TRE1YPL176C YPR084WQ06821 456 aa5.69□□□□□ -1.5
TRE1YPL176C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
TRE1YPL176C ISF1P32488 338 aa5.68□□□□□ -1.5
TRE1YPL176C YKL091CP33324 310 aaKnown RBP5.68□□□□□ -1.5
TRE1YPL176C YHL050CP38721 697 aa5.68□□□□□ -1.5
TRE1YPL176C YHR219WP38900 624 aa5.68□□□□□ -1.5
TRE1YPL176C YEL077CQ3E7X8 1277 aa5.68□□□□□ -1.5
TRE1YPL176C POL5P39985 1022 aaKnown RBP5.67□□□□□ -1.5
TRE1YPL176C ALD3P54114 506 aa5.67□□□□□ -1.5
TRE1YPL176C POB3Q04636 552 aaKnown RBP5.67□□□□□ -1.5
TRE1YPL176C MOD5P07884 428 aa5.67□□□□□ -1.5
TRE1YPL176C TRL1P09880 827 aaKnown RBP5.67□□□□□ -1.5
TRE1YPL176C KAR1P11927 433 aa5.67□□□□□ -1.5
TRE1YPL176C FIG4P42837 879 aa5.67□□□□□ -1.5
TRE1YPL176C ALR1Q08269 859 aa5.67□□□□□ -1.5
TRE1YPL176C PEP12P32854 288 aa5.66□□□□□ -1.5
TRE1YPL176C TGL4P36165 910 aa5.66□□□□□ -1.5
TRE1YPL176C ENP1P38333 483 aaKnown RBP5.66□□□□□ -1.5
TRE1YPL176C SDH2P21801 266 aa5.66□□□□□ -1.5
TRE1YPL176C NOC2P39744 710 aaKnown RBP5.66□□□□□ -1.5
TRE1YPL176C BUD6P41697 788 aa5.66□□□□□ -1.5
TRE1YPL176C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
TRE1YPL176C SVL3Q03088 825 aaKnown RBP5.66□□□□□ -1.5
TRE1YPL176C PSH1Q12161 406 aa5.66□□□□□ -1.5
TRE1YPL176C VPS27P40343 622 aaKnown RBP5.65□□□□□ -1.5
TRE1YPL176C HXT10P43581 546 aa5.65□□□□□ -1.5
TRE1YPL176C RPN4Q03465 531 aa5.65□□□□□ -1.5
TRE1YPL176C EMP47P43555 445 aa5.65□□□□□ -1.51
TRE1YPL176C COG4Q06096 861 aa5.65□□□□□ -1.51
TRE1YPL176C SSF2Q12153 453 aaPredicted RBP5.65□□□□□ -1.51
TRE1YPL176C DAL5P15365 543 aa5.64□□□□□ -1.51
TRE1YPL176C TPD3P31383 635 aa5.64□□□□□ -1.51
TRE1YPL176C RRD1P40454 393 aaKnown RBP5.64□□□□□ -1.51
TRE1YPL176C MDJ2P42834 146 aa5.64□□□□□ -1.51
TRE1YPL176C FRA1Q07825 749 aa5.64□□□□□ -1.51
TRE1YPL176C SEC6P32844 805 aa5.64□□□□□ -1.51
TRE1YPL176C FUI1P38196 639 aa5.64□□□□□ -1.51
TRE1YPL176C PPX1P38698 397 aa5.64□□□□□ -1.51
TRE1YPL176C MPP10P47083 593 aaKnown RBP5.64□□□□□ -1.51
TRE1YPL176C NSE3Q05541 303 aa5.64□□□□□ -1.51
TRE1YPL176C TEC1P18412 486 aa5.63□□□□□ -1.51
TRE1YPL176C MET1P36150 593 aa5.63□□□□□ -1.51
TRE1YPL176C APL6P46682 809 aa5.63□□□□□ -1.51
TRE1YPL176C YJR107WP47145 328 aa5.63□□□□□ -1.51
TRE1YPL176C YJR142WP47173 342 aa5.63□□□□□ -1.51
TRE1YPL176C NKP1Q12493 238 aa5.63□□□□□ -1.51
TRE1YPL176C SPT16P32558 1035 aaKnown RBP5.63□□□□□ -1.51
TRE1YPL176C MFT1P33441 392 aaKnown RBP5.63□□□□□ -1.51
TRE1YPL176C YPP1P46951 817 aa5.63□□□□□ -1.51
TRE1YPL176C KXD1P53158 218 aa5.63□□□□□ -1.51
TRE1YPL176C ALD6P54115 500 aaKnown RBP5.63□□□□□ -1.51
TRE1YPL176C VAC17P25591 423 aa5.62□□□□□ -1.51
TRE1YPL176C NFU1P32860 256 aa5.62□□□□□ -1.51
TRE1YPL176C SAS4Q04003 481 aa5.62□□□□□ -1.51
TRE1YPL176C PAT1P25644 796 aaKnown RBP5.62□□□□□ -1.51
TRE1YPL176C TPS3P38426 1054 aaKnown RBP5.62□□□□□ -1.51
TRE1YPL176C GYP1Q08484 637 aa5.62□□□□□ -1.51
TRE1YPL176C MNL2Q12205 849 aa5.62□□□□□ -1.51
TRE1YPL176C NHA1Q99271 985 aa5.62□□□□□ -1.51
TRE1YPL176C GRX7P38068 203 aa5.61□□□□□ -1.51
TRE1YPL176C PBP2P38151 413 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
TRE1YPL176C MNN1P39106 762 aa5.61□□□□□ -1.51
TRE1YPL176C UBP12P39538 1254 aa5.61□□□□□ -1.51
TRE1YPL176C YGL081WP53156 320 aa5.61□□□□□ -1.51
TRE1YPL176C CEF1Q03654 590 aaPredicted RBP5.61□□□□□ -1.51
TRE1YPL176C ENT2Q05785 613 aa5.61□□□□□ -1.51
TRE1YPL176C YGR161W-CQ3E744 92 aa5.61□□□□□ -1.51
TRE1YPL176C PWP2P25635 923 aaKnown RBP5.6□□□□□ -1.51
TRE1YPL176C VPS24P36095 224 aaKnown RBP5.6□□□□□ -1.51
TRE1YPL176C TAF13P11747 167 aa5.6□□□□□ -1.51
TRE1YPL176C TRX2P22803 104 aaKnown RBP5.6□□□□□ -1.51
TRE1YPL176C THI12P42883 340 aa5.6□□□□□ -1.51
TRE1YPL176C THI5P43534 340 aa5.6□□□□□ -1.51
TRE1YPL176C THI11P47183 340 aa5.6□□□□□ -1.51
TRE1YPL176C THI13Q07748 340 aa5.6□□□□□ -1.51
TRE1YPL176C THS1P04801 734 aaKnown RBP5.59□□□□□ -1.51
TRE1YPL176C VRP1P37370 817 aa5.59□□□□□ -1.51
TRE1YPL176C GRS1P38088 690 aaKnown RBP5.59□□□□□ -1.51
TRE1YPL176C STE20Q03497 939 aaKnown RBP5.59□□□□□ -1.51
TRE1YPL176C KAR5Q04746 504 aa5.59□□□□□ -1.51
TRE1YPL176C GUT2P32191 649 aa5.59□□□□□ -1.51
TRE1YPL176C GLO3P38682 493 aaKnown RBP5.59□□□□□ -1.51
TRE1YPL176C ESF2P53743 316 aaKnown RBP5.59□□□□□ -1.51
TRE1YPL176C ERP4Q12450 207 aa5.59□□□□□ -1.51
TRE1YPL176C YEN1P40028 759 aa5.58□□□□□ -1.52
TRE1YPL176C ECM23Q02710 187 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 173 ms