RNA–Protein interactions for RNA: YPL135W

ISU1, Transcript of Conserved protein of the mitochondrial matrix, yeast

Gene ISU1, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISU1	YPL135W	SPT2	P06843	333 aa	Predicted RBP	4.2	□□□□□ -1.74
ISU1	YPL135W	STE6	P12866	1290 aa		4.2	□□□□□ -1.74
ISU1	YPL135W	SUV3	P32580	737 aa		4.2	□□□□□ -1.74
ISU1	YPL135W	BOL3	P39724	118 aa		4.2	□□□□□ -1.74
ISU1	YPL135W	UTP7	P40055	554 aa	Known RBP	4.2	□□□□□ -1.74
ISU1	YPL135W	AIR1	P40507	360 aa	Known RBP	4.2	□□□□□ -1.74
ISU1	YPL135W	SEN54	Q02825	467 aa	Predicted RBP	4.2	□□□□□ -1.74
ISU1	YPL135W	BDS1	Q08347	646 aa		4.2	□□□□□ -1.74
ISU1	YPL135W	MET32	Q12041	191 aa		4.2	□□□□□ -1.74
ISU1	YPL135W	FUR4	P05316	633 aa	Known RBP	4.19	□□□□□ -1.74
ISU1	YPL135W	IPL1	P38991	367 aa		4.19	□□□□□ -1.74
ISU1	YPL135W	TRL1	P09880	827 aa	Known RBP	4.18	□□□□□ -1.74
ISU1	YPL135W	GLO3	P38682	493 aa	Known RBP	4.18	□□□□□ -1.74
ISU1	YPL135W	FOX2	Q02207	900 aa	Known RBP	4.18	□□□□□ -1.74
ISU1	YPL135W	UBP1	P25037	809 aa		4.17	□□□□□ -1.74
ISU1	YPL135W	NGR1	P32831	672 aa	Known RBP	4.17	□□□□□ -1.74
ISU1	YPL135W	YHL050C	P38721	697 aa		4.17	□□□□□ -1.74
ISU1	YPL135W	YHR219W	P38900	624 aa		4.17	□□□□□ -1.74
ISU1	YPL135W	STM1	P39015	273 aa	Known RBP	4.17	□□□□□ -1.74
ISU1	YPL135W	QDR1	P40475	563 aa		4.17	□□□□□ -1.74
ISU1	YPL135W	MDJ2	P42834	146 aa		4.17	□□□□□ -1.74
ISU1	YPL135W	CWH41	P53008	833 aa		4.17	□□□□□ -1.74
ISU1	YPL135W	UGA3	P26370	528 aa		4.16	□□□□□ -1.74
ISU1	YPL135W	ISC10	P32645	267 aa		4.16	□□□□□ -1.74
ISU1	YPL135W	RRN6	P32786	894 aa		4.16	□□□□□ -1.74
ISU1	YPL135W	ASH1	P34233	588 aa		4.16	□□□□□ -1.74
ISU1	YPL135W	YBR197C	P38306	217 aa		4.16	□□□□□ -1.74
ISU1	YPL135W	DLD3	P39976	496 aa	Known RBP	4.16	□□□□□ -1.74
ISU1	YPL135W	RPP2B	P02400	110 aa	Known RBP	4.15	□□□□□ -1.75
ISU1	YPL135W	BOI1	P38041	980 aa	Known RBP	4.15	□□□□□ -1.75
ISU1	YPL135W	ATG1	P53104	897 aa		4.15	□□□□□ -1.75
ISU1	YPL135W	HST3	P53687	447 aa		4.15	□□□□□ -1.75
ISU1	YPL135W	CDC4	P07834	779 aa		4.14	□□□□□ -1.75
ISU1	YPL135W	HEM3	P28789	327 aa		4.14	□□□□□ -1.75
ISU1	YPL135W	ALA1	P40825	983 aa	Known RBP	4.14	□□□□□ -1.75
ISU1	YPL135W	THI12	P42883	340 aa		4.14	□□□□□ -1.75
ISU1	YPL135W	THI5	P43534	340 aa		4.14	□□□□□ -1.75
ISU1	YPL135W	SUM1	P46676	1062 aa		4.14	□□□□□ -1.75
ISU1	YPL135W	THI11	P47183	340 aa		4.14	□□□□□ -1.75
ISU1	YPL135W	CAB1	Q04430	367 aa		4.14	□□□□□ -1.75
ISU1	YPL135W	YPQ2	Q06328	317 aa		4.14	□□□□□ -1.75
ISU1	YPL135W	THI13	Q07748	340 aa		4.14	□□□□□ -1.75
ISU1	YPL135W	MSC6	Q08818	692 aa	Known RBP	4.14	□□□□□ -1.75
ISU1	YPL135W	LSO1	Q3E827	93 aa		4.13	□□□□□ -1.75
ISU1	YPL135W	FRT1	Q99332	602 aa		4.13	□□□□□ -1.75
ISU1	YPL135W	RPB10	P22139	70 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	AFT1	P22149	690 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	SEC20	P28791	383 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	DLD1	P32891	587 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	HXT5	P38695	592 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	AAD14	P42884	376 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	ACF4	P47129	309 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	YNL165W	P53891	406 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	NUT2	Q06213	157 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	WHI5	Q12416	295 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	Q0182	Q9ZZW1	134 aa		4.12	□□□□□ -1.75
ISU1	YPL135W	ARG82	P07250	355 aa		4.11	□□□□□ -1.75
ISU1	YPL135W	YJR115W	P47152	169 aa		4.11	□□□□□ -1.75
ISU1	YPL135W	MSB3	P48566	633 aa	Predicted RBP	4.11	□□□□□ -1.75
ISU1	YPL135W	SUT1	P53032	299 aa	Known RBP	4.11	□□□□□ -1.75
ISU1	YPL135W	MCM1	P11746	286 aa		4.1	□□□□□ -1.75
ISU1	YPL135W	SSN3	P39073	555 aa		4.1	□□□□□ -1.75
ISU1	YPL135W	PTK2	P47116	818 aa	Known RBP	4.1	□□□□□ -1.75
ISU1	YPL135W	SRF1	Q12516	437 aa		4.1	□□□□□ -1.75
ISU1	YPL135W	ATE1	P16639	503 aa		4.09	□□□□□ -1.75
ISU1	YPL135W	MRPL33	P20084	86 aa		4.09	□□□□□ -1.75
ISU1	YPL135W	MLF3	P32047	452 aa		4.09	□□□□□ -1.75
ISU1	YPL135W	RTT106	P40161	455 aa		4.09	□□□□□ -1.75
ISU1	YPL135W	BRE2	P43132	505 aa		4.09	□□□□□ -1.75
ISU1	YPL135W	POL32	P47110	350 aa		4.09	□□□□□ -1.75
ISU1	YPL135W	VMA3	P25515	160 aa		4.08	□□□□□ -1.76
ISU1	YPL135W	SCD5	P34758	872 aa		4.08	□□□□□ -1.76
ISU1	YPL135W	SHM1	P37292	490 aa	Predicted RBP	4.08	□□□□□ -1.76
ISU1	YPL135W	PPX1	P38698	397 aa		4.08	□□□□□ -1.76
ISU1	YPL135W	JJJ2	P46997	583 aa		4.08	□□□□□ -1.76
ISU1	YPL135W	ALD2	P47771	506 aa		4.08	□□□□□ -1.76
ISU1	YPL135W	KTR2	P33550	425 aa		4.07	□□□□□ -1.76
ISU1	YPL135W	SPR3	P41901	512 aa		4.07	□□□□□ -1.76
ISU1	YPL135W	SNU71	P53207	620 aa	Known RBP	4.07	□□□□□ -1.76
ISU1	YPL135W	GCR2	Q01722	534 aa		4.07	□□□□□ -1.76
ISU1	YPL135W	TRS120	Q04183	1289 aa		4.07	□□□□□ -1.76
ISU1	YPL135W	GPI13	Q07830	1017 aa		4.07	□□□□□ -1.76
ISU1	YPL135W	APC11	Q12157	165 aa		4.07	□□□□□ -1.76
ISU1	YPL135W	TY1A-DR3	Q12441	440 aa		4.07	□□□□□ -1.76
ISU1	YPL135W	RPS31	P05759	152 aa	Known RBP	4.06	□□□□□ -1.76
ISU1	YPL135W	MET4	P32389	672 aa		4.06	□□□□□ -1.76
ISU1	YPL135W	AHP1	P38013	176 aa	Known RBP	4.06	□□□□□ -1.76
ISU1	YPL135W	QDR2	P40474	542 aa		4.06	□□□□□ -1.76
ISU1	YPL135W	IRE1	P32361	1115 aa		4.05	□□□□□ -1.76
ISU1	YPL135W	LDH1	P38139	375 aa		4.05	□□□□□ -1.76
ISU1	YPL135W	YTA6	P40328	754 aa		4.05	□□□□□ -1.76
ISU1	YPL135W	HXT8	P40886	569 aa		4.05	□□□□□ -1.76
ISU1	YPL135W	YJR098C	P47139	656 aa		4.05	□□□□□ -1.76
ISU1	YPL135W	MSN5	P52918	1224 aa		4.05	□□□□□ -1.76
ISU1	YPL135W	MTO1	P53070	669 aa		4.05	□□□□□ -1.76
ISU1	YPL135W	RRP15	Q06511	250 aa	Predicted RBP	4.05	□□□□□ -1.76
ISU1	YPL135W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
ISU1	YPL135W	ASF1	P32447	279 aa		4.04	□□□□□ -1.76
ISU1	YPL135W	SLA1	P32790	1244 aa		4.04	□□□□□ -1.76
ISU1	YPL135W	SEC8	P32855	1065 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms