RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W GUT1P32190 709 aa4.5□□□□□ -1.69
MSD1YPL104W DSD1P53095 428 aa4.5□□□□□ -1.69
MSD1YPL104W YGR273CP53329 174 aa4.5□□□□□ -1.69
MSD1YPL104W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
MSD1YPL104W RTT109Q07794 436 aa4.5□□□□□ -1.69
MSD1YPL104W TCB1Q12466 1186 aa4.5□□□□□ -1.69
MSD1YPL104W KEX1P09620 729 aa4.49□□□□□ -1.69
MSD1YPL104W VMA1P17255 1071 aaKnown RBP4.49□□□□□ -1.69
MSD1YPL104W YNL108CP53929 270 aa4.49□□□□□ -1.69
MSD1YPL104W YRF1-3P0CX14 1859 aa4.49□□□□□ -1.69
MSD1YPL104W YRF1-7P0CX15 1859 aa4.49□□□□□ -1.69
MSD1YPL104W YRF1-6P53819 1859 aa4.49□□□□□ -1.69
MSD1YPL104W CDC3P32457 520 aaKnown RBP4.49□□□□□ -1.69
MSD1YPL104W ORC6P38826 435 aa4.48□□□□□ -1.69
MSD1YPL104W XKS1P42826 600 aa4.48□□□□□ -1.69
MSD1YPL104W SNU71P53207 620 aaKnown RBP4.48□□□□□ -1.69
MSD1YPL104W YNL050CP53952 270 aa4.48□□□□□ -1.69
MSD1YPL104W HSP104P31539 908 aaKnown RBP4.47□□□□□ -1.69
MSD1YPL104W NTH2P35172 780 aa4.47□□□□□ -1.69
MSD1YPL104W BUD27P43573 796 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
MSD1YPL104W CTF4Q01454 927 aa4.47□□□□□ -1.69
MSD1YPL104W AOS1Q06624 347 aa4.47□□□□□ -1.69
MSD1YPL104W EDE1P34216 1381 aa4.47□□□□□ -1.69
MSD1YPL104W RAD2P07276 1031 aa4.47□□□□□ -1.69
MSD1YPL104W PKH3Q03306 898 aaPredicted RBP4.47□□□□□ -1.69
MSD1YPL104W YML083CQ04526 418 aa4.47□□□□□ -1.69
MSD1YPL104W ENT1Q12518 454 aa4.47□□□□□ -1.69
MSD1YPL104W RGR1P19263 1082 aa4.46□□□□□ -1.7
MSD1YPL104W FPR3P38911 411 aaKnown RBP4.46□□□□□ -1.7
MSD1YPL104W MAM1P40065 302 aa4.46□□□□□ -1.7
MSD1YPL104W YIL092WP40497 633 aa4.46□□□□□ -1.7
MSD1YPL104W RAD59Q12223 238 aa4.46□□□□□ -1.7
MSD1YPL104W LYS2P07702 1392 aa4.46□□□□□ -1.7
MSD1YPL104W RIM15P43565 1770 aa4.46□□□□□ -1.7
MSD1YPL104W DAL5P15365 543 aa4.45□□□□□ -1.7
MSD1YPL104W SCJ1P25303 377 aa4.45□□□□□ -1.7
MSD1YPL104W SSF1P38789 453 aaPredicted RBP4.45□□□□□ -1.7
MSD1YPL104W SOL3P38858 249 aa4.45□□□□□ -1.7
MSD1YPL104W GYP7P48365 746 aa4.45□□□□□ -1.7
MSD1YPL104W ZDS1P50111 915 aaKnown RBP4.45□□□□□ -1.7
MSD1YPL104W HAT1Q12341 374 aa4.45□□□□□ -1.7
MSD1YPL104W ESS1P22696 170 aa4.45□□□□□ -1.7
MSD1YPL104W RRT14P40470 206 aa4.45□□□□□ -1.7
MSD1YPL104W FPK1P53739 893 aa4.45□□□□□ -1.7
MSD1YPL104W APP1P53933 587 aa4.45□□□□□ -1.7
MSD1YPL104W NIS1P53939 407 aa4.45□□□□□ -1.7
MSD1YPL104W ENV9Q08651 330 aa4.45□□□□□ -1.7
MSD1YPL104W NUP145P49687 1317 aa4.45□□□□□ -1.7
MSD1YPL104W ROM2P51862 1356 aaKnown RBP4.44□□□□□ -1.7
MSD1YPL104W PUP1P25043 261 aa4.44□□□□□ -1.7
MSD1YPL104W KCC4P25389 1037 aa4.44□□□□□ -1.7
MSD1YPL104W UGA3P26370 528 aa4.44□□□□□ -1.7
MSD1YPL104W YFR016CP43597 1233 aaKnown RBP4.44□□□□□ -1.7
MSD1YPL104W MEC3Q02574 474 aa4.44□□□□□ -1.7
MSD1YPL104W IMH1Q06704 911 aaKnown RBP4.44□□□□□ -1.7
MSD1YPL104W INP54Q08227 384 aaKnown RBP4.44□□□□□ -1.7
MSD1YPL104W MMP1Q12372 583 aa4.44□□□□□ -1.7
MSD1YPL104W HEM3P28789 327 aa4.44□□□□□ -1.7
MSD1YPL104W RRN6P32786 894 aa4.44□□□□□ -1.7
MSD1YPL104W YAP5P40574 245 aa4.44□□□□□ -1.7
MSD1YPL104W MVP1P40959 511 aaKnown RBP4.44□□□□□ -1.7
MSD1YPL104W HST2P53686 357 aa4.44□□□□□ -1.7
MSD1YPL104W SEN54Q02825 467 aaPredicted RBP4.44□□□□□ -1.7
MSD1YPL104W NSE3Q05541 303 aa4.44□□□□□ -1.7
MSD1YPL104W ENO1P00924 437 aaKnown RBP4.43□□□□□ -1.7
MSD1YPL104W SUP45P12385 437 aaKnown RBP4.43□□□□□ -1.7
MSD1YPL104W YJU3P28321 313 aa4.43□□□□□ -1.7
MSD1YPL104W CLB5P30283 435 aa4.43□□□□□ -1.7
MSD1YPL104W SRT1Q03175 343 aa4.43□□□□□ -1.7
MSD1YPL104W BMS1Q08965 1183 aaKnown RBP4.43□□□□□ -1.7
MSD1YPL104W COQ4O13525 335 aa4.42□□□□□ -1.7
MSD1YPL104W ENO2P00925 437 aaKnown RBP4.42□□□□□ -1.7
MSD1YPL104W YKL133CP36066 463 aa4.42□□□□□ -1.7
MSD1YPL104W PAM1P37304 830 aaKnown RBP4.42□□□□□ -1.7
MSD1YPL104W YBR287WP38355 427 aa4.42□□□□□ -1.7
MSD1YPL104W ADE16P54113 591 aaKnown RBP4.42□□□□□ -1.7
MSD1YPL104W GYP5Q12344 894 aa4.42□□□□□ -1.7
MSD1YPL104W ARG8P18544 423 aa4.42□□□□□ -1.7
MSD1YPL104W YDJ1P25491 409 aaKnown RBP4.42□□□□□ -1.7
MSD1YPL104W POL32P47110 350 aa4.42□□□□□ -1.7
MSD1YPL104W FRK1Q03002 865 aaPredicted RBP4.42□□□□□ -1.7
MSD1YPL104W TRP5P00931 707 aaKnown RBP4.4□□□□□ -1.7
MSD1YPL104W YPP1P46951 817 aa4.4□□□□□ -1.7
MSD1YPL104W YPR109WQ06104 294 aa4.4□□□□□ -1.7
MSD1YPL104W ATG13Q06628 738 aa4.4□□□□□ -1.7
MSD1YPL104W ALE1Q08548 619 aa4.4□□□□□ -1.7
MSD1YPL104W PUF6Q04373 656 aaKnown RBP4.4□□□□□ -1.71
MSD1YPL104W YOL057WQ08225 711 aa4.4□□□□□ -1.71
MSD1YPL104W SAM3Q08986 587 aa4.4□□□□□ -1.71
MSD1YPL104W UTP10P42945 1769 aaKnown RBP4.4□□□□□ -1.71
MSD1YPL104W RAD4P14736 754 aa4.39□□□□□ -1.71
MSD1YPL104W RPC31P17890 251 aa4.39□□□□□ -1.71
MSD1YPL104W OSM1P21375 501 aaKnown RBP4.39□□□□□ -1.71
MSD1YPL104W DCW1P36091 449 aa4.39□□□□□ -1.71
MSD1YPL104W TGL4P36165 910 aa4.39□□□□□ -1.71
MSD1YPL104W RMT2Q03305 412 aa4.39□□□□□ -1.71
MSD1YPL104W CSI1Q04368 295 aa4.39□□□□□ -1.71
MSD1YPL104W MRX10Q05648 414 aa4.39□□□□□ -1.71
MSD1YPL104W MRP7P12687 371 aa4.38□□□□□ -1.71
MSD1YPL104W YBP2P53169 641 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms