RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W UTP7P40055 554 aaKnown RBP8.95□□□□□ -0.98
VPS28YPL065W SLX8P40072 274 aa8.95□□□□□ -0.98
VPS28YPL065W ALA1P40825 983 aaKnown RBP8.95□□□□□ -0.98
VPS28YPL065W JJJ3P47138 172 aa8.93□□□□□ -0.98
VPS28YPL065W CUZ1P53899 274 aa8.93□□□□□ -0.98
VPS28YPL065W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
VPS28YPL065W SLA1P32790 1244 aa8.92□□□□□ -0.98
VPS28YPL065W YFL034WP43564 1073 aa8.92□□□□□ -0.98
VPS28YPL065W TIF1P10081 395 aaKnown RBP8.91□□□□□ -0.98
VPS28YPL065W RTG2P32608 588 aaKnown RBP8.91□□□□□ -0.98
VPS28YPL065W CEM1P39525 442 aa8.91□□□□□ -0.98
VPS28YPL065W ATG32P40458 529 aa8.91□□□□□ -0.98
VPS28YPL065W RDS2P19541 446 aaKnown RBP8.89□□□□□ -0.99
VPS28YPL065W YMR265CQ03508 461 aaKnown RBP8.89□□□□□ -0.99
VPS28YPL065W MTC5Q03897 1148 aa8.89□□□□□ -0.99
VPS28YPL065W MRX10Q05648 414 aa8.89□□□□□ -0.99
VPS28YPL065W DIT1P21623 536 aa8.88□□□□□ -0.99
VPS28YPL065W AIM9P40053 627 aaKnown RBP8.88□□□□□ -0.99
VPS28YPL065W JJJ2P46997 583 aa8.88□□□□□ -0.99
VPS28YPL065W ENO1P00924 437 aaKnown RBP8.87□□□□□ -0.99
VPS28YPL065W TY1A-DR3Q12441 440 aa8.87□□□□□ -0.99
VPS28YPL065W SWI5P08153 709 aa8.85□□□□□ -0.99
VPS28YPL065W IRE1P32361 1115 aa8.85□□□□□ -0.99
VPS28YPL065W ICP55P40051 511 aa8.84□□□□□ -0.99
VPS28YPL065W KRE33P53914 1056 aaKnown RBP8.83□□□□□ -1
VPS28YPL065W YDR461C-AQ2V2P7 80 aa8.83□□□□□ -1
VPS28YPL065W SYT1Q06836 1226 aa8.82□□□□□ -1
VPS28YPL065W TSC13Q99190 310 aa8.82□□□□□ -1
VPS28YPL065W RPS6AP0CX37 236 aaKnown RBP8.81□□□□□ -1
VPS28YPL065W RPS6BP0CX38 236 aaPredicted RBP8.81□□□□□ -1
VPS28YPL065W SIS2P36024 562 aa8.81□□□□□ -1
VPS28YPL065W YPQ2Q06328 317 aa8.81□□□□□ -1
VPS28YPL065W PUS1Q12211 544 aaKnown RBP8.81□□□□□ -1
VPS28YPL065W PHM7Q12252 991 aa8.81□□□□□ -1
VPS28YPL065W ADE12P80210 433 aaKnown RBP8.8□□□□□ -1
VPS28YPL065W AI1P03875 834 aa8.79□□□□□ -1
VPS28YPL065W NTH2P35172 780 aa8.79□□□□□ -1
VPS28YPL065W MCM1P11746 286 aa8.78□□□□□ -1
VPS28YPL065W PDI1P17967 522 aaKnown RBP8.78□□□□□ -1
VPS28YPL065W PEP12P32854 288 aa8.78□□□□□ -1
VPS28YPL065W SHM1P37292 490 aaPredicted RBP8.77□□□□□ -1.01
VPS28YPL065W RPP1AP05318 106 aaPredicted RBP8.75□□□□□ -1.01
VPS28YPL065W FPS1P23900 669 aa8.75□□□□□ -1.01
VPS28YPL065W PDC6P26263 563 aaKnown RBP8.75□□□□□ -1.01
VPS28YPL065W NSG2P53898 299 aa8.75□□□□□ -1.01
VPS28YPL065W YTA6P40328 754 aa8.74□□□□□ -1.01
VPS28YPL065W PSH1Q12161 406 aa8.74□□□□□ -1.01
VPS28YPL065W MRPL16P38064 232 aa8.73□□□□□ -1.01
VPS28YPL065W THI72Q08579 599 aa8.73□□□□□ -1.01
VPS28YPL065W CYT1P07143 309 aa8.72□□□□□ -1.01
VPS28YPL065W HAP4P14064 554 aa8.72□□□□□ -1.01
VPS28YPL065W PHO87P25360 923 aa8.72□□□□□ -1.01
VPS28YPL065W MDJ1P35191 511 aa8.71□□□□□ -1.02
VPS28YPL065W STB3Q12427 513 aa8.71□□□□□ -1.02
VPS28YPL065W RPS31P05759 152 aaKnown RBP8.7□□□□□ -1.02
VPS28YPL065W KTR7P40504 517 aa8.7□□□□□ -1.02
VPS28YPL065W GAS4Q08271 471 aa8.7□□□□□ -1.02
VPS28YPL065W LEU1P07264 779 aaKnown RBP8.69□□□□□ -1.02
VPS28YPL065W ACS2P52910 683 aaKnown RBP8.68□□□□□ -1.02
VPS28YPL065W SPR3P41901 512 aa8.66□□□□□ -1.02
VPS28YPL065W UBP1P25037 809 aa8.65□□□□□ -1.02
VPS28YPL065W YFL066CP43538 392 aa8.65□□□□□ -1.02
VPS28YPL065W GPM1P00950 247 aaKnown RBP8.64□□□□□ -1.03
VPS28YPL065W GAL2P13181 574 aa8.64□□□□□ -1.03
VPS28YPL065W MLF3P32047 452 aa8.64□□□□□ -1.03
VPS28YPL065W YNL165WP53891 406 aa8.64□□□□□ -1.03
VPS28YPL065W Q0182Q9ZZW1 134 aa8.64□□□□□ -1.03
VPS28YPL065W RGP1P16664 663 aa8.63□□□□□ -1.03
VPS28YPL065W LSB3P43603 459 aaKnown RBP8.63□□□□□ -1.03
VPS28YPL065W SCD5P34758 872 aa8.62□□□□□ -1.03
VPS28YPL065W ALD2P47771 506 aa8.62□□□□□ -1.03
VPS28YPL065W UTP4Q06679 776 aaKnown RBP8.62□□□□□ -1.03
VPS28YPL065W YNR014WP53719 212 aa8.61□□□□□ -1.03
VPS28YPL065W YPR053CQ6Q5F3 151 aa8.61□□□□□ -1.03
VPS28YPL065W KNS1P32350 737 aaPredicted RBP8.6□□□□□ -1.03
VPS28YPL065W MET1P36150 593 aa8.6□□□□□ -1.03
VPS28YPL065W VAN1P23642 535 aa8.59□□□□□ -1.03
VPS28YPL065W NGR1P32831 672 aaKnown RBP8.59□□□□□ -1.03
VPS28YPL065W TTI1P36097 1038 aa8.58□□□□□ -1.04
VPS28YPL065W TGL4P36165 910 aa8.58□□□□□ -1.04
VPS28YPL065W SBE2P42223 864 aaKnown RBP8.58□□□□□ -1.04
VPS28YPL065W TY1A-DR2Q03964 440 aaKnown RBP8.58□□□□□ -1.04
VPS28YPL065W CWH41P53008 833 aa8.57□□□□□ -1.04
VPS28YPL065W ROM1P53046 1155 aa8.57□□□□□ -1.04
VPS28YPL065W TDA6Q06466 467 aa8.57□□□□□ -1.04
VPS28YPL065W RLF2Q12495 606 aa8.57□□□□□ -1.04
VPS28YPL065W PDC5P16467 563 aaKnown RBP8.56□□□□□ -1.04
VPS28YPL065W MTO1P53070 669 aa8.56□□□□□ -1.04
VPS28YPL065W YMR187CQ03236 431 aa8.56□□□□□ -1.04
VPS28YPL065W HEH2Q03281 663 aa8.56□□□□□ -1.04
VPS28YPL065W BOI2P39969 1040 aa8.55□□□□□ -1.04
VPS28YPL065W TRS33Q99394 268 aa8.55□□□□□ -1.04
VPS28YPL065W MCX1P38323 520 aaPredicted RBP8.54□□□□□ -1.04
VPS28YPL065W ECM23Q02710 187 aa8.54□□□□□ -1.04
VPS28YPL065W KAP122P32767 1081 aa8.52□□□□□ -1.05
VPS28YPL065W NCL1P38205 684 aaKnown RBP8.52□□□□□ -1.05
VPS28YPL065W MSC7P38694 644 aa8.52□□□□□ -1.05
VPS28YPL065W HXT5P38695 592 aa8.52□□□□□ -1.05
VPS28YPL065W SKP1P52286 194 aa8.52□□□□□ -1.05
VPS28YPL065W SKN7P38889 622 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms