RNA–Protein interactions for RNA: YOL054W

PSH1, Transcript of E3 ubiquitin ligase targeting centromere-binding protein Cse4p, yeastyeast

Gene PSH1, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSH1YOL054W GCD11P32481 527 aaKnown RBP7.6□□□□□ -1.19
PSH1YOL054W AIR1P40507 360 aaKnown RBP7.6□□□□□ -1.19
PSH1YOL054W CST6P40535 587 aa7.59□□□□□ -1.19
PSH1YOL054W BRE2P43132 505 aa7.59□□□□□ -1.19
PSH1YOL054W ENV9Q08651 330 aa7.59□□□□□ -1.19
PSH1YOL054W ENP1P38333 483 aaKnown RBP7.58□□□□□ -1.2
PSH1YOL054W KTR7P40504 517 aa7.58□□□□□ -1.2
PSH1YOL054W CLA4P48562 842 aa7.58□□□□□ -1.2
PSH1YOL054W CAT8P39113 1433 aa7.58□□□□□ -1.2
PSH1YOL054W TUB4P53378 473 aa7.57□□□□□ -1.2
PSH1YOL054W IRC20Q06554 1556 aa7.57□□□□□ -1.2
PSH1YOL054W PEP12P32854 288 aa7.56□□□□□ -1.2
PSH1YOL054W EMP47P43555 445 aa7.56□□□□□ -1.2
PSH1YOL054W RPA14P50106 137 aa7.56□□□□□ -1.2
PSH1YOL054W ECM23Q02710 187 aa7.56□□□□□ -1.2
PSH1YOL054W ALR1Q08269 859 aa7.56□□□□□ -1.2
PSH1YOL054W TEC1P18412 486 aa7.55□□□□□ -1.2
PSH1YOL054W ISF1P32488 338 aa7.55□□□□□ -1.2
PSH1YOL054W ATG3P40344 310 aa7.55□□□□□ -1.2
PSH1YOL054W SEC2P17065 759 aa7.54□□□□□ -1.2
PSH1YOL054W SSF1P38789 453 aaPredicted RBP7.54□□□□□ -1.2
PSH1YOL054W GCR2Q01722 534 aa7.54□□□□□ -1.2
PSH1YOL054W HAT1Q12341 374 aa7.54□□□□□ -1.2
PSH1YOL054W PDR10P51533 1564 aa7.54□□□□□ -1.2
PSH1YOL054W SEC3P33332 1336 aaKnown RBP7.53□□□□□ -1.2
PSH1YOL054W TY1A-DR4O74302 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-HP0C2I4 478 aaKnown RBP7.53□□□□□ -1.2
PSH1YOL054W TY1A-AP0CX57 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-PR1P0CX58 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-ORP0CX59 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-PR2P0CX60 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-DR5P0CX65 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-ER2P0CX66 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-GR3P0CX67 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-LR1P0CX68 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-MR2P0CX69 440 aa7.53□□□□□ -1.2
PSH1YOL054W RDS2P19541 446 aaKnown RBP7.53□□□□□ -1.2
PSH1YOL054W GUT2P32191 649 aa7.53□□□□□ -1.2
PSH1YOL054W RTT106P40161 455 aa7.53□□□□□ -1.2
PSH1YOL054W MRX12P47084 519 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-JR2P47099 440 aa7.53□□□□□ -1.2
PSH1YOL054W STE20Q03497 939 aaKnown RBP7.53□□□□□ -1.2
PSH1YOL054W TY1A-DR1Q03856 440 aa7.53□□□□□ -1.2
PSH1YOL054W AGE1Q04412 482 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-ML1Q04706 440 aaKnown RBP7.53□□□□□ -1.2
PSH1YOL054W TY1A-BRQ12217 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-NL2Q12470 440 aa7.53□□□□□ -1.2
PSH1YOL054W TY1A-GR2Q12485 440 aa7.53□□□□□ -1.2
PSH1YOL054W DRS2P39524 1355 aa7.52□□□□□ -1.21
PSH1YOL054W PAT1P25644 796 aaKnown RBP7.52□□□□□ -1.21
PSH1YOL054W RPO21P04050 1733 aaKnown RBP7.52□□□□□ -1.21
PSH1YOL054W GAR1P28007 205 aaKnown RBP7.51□□□□□ -1.21
PSH1YOL054W KXD1P53158 218 aa7.51□□□□□ -1.21
PSH1YOL054W YPR097WQ06839 1073 aa7.51□□□□□ -1.21
PSH1YOL054W GCN2P15442 1659 aa7.51□□□□□ -1.21
PSH1YOL054W NTE1Q04958 1679 aa7.51□□□□□ -1.21
PSH1YOL054W GAL2P13181 574 aa7.5□□□□□ -1.21
PSH1YOL054W UBX7P38349 436 aa7.5□□□□□ -1.21
PSH1YOL054W SRB8P25648 1427 aa7.5□□□□□ -1.21
PSH1YOL054W SPT16P32558 1035 aaKnown RBP7.49□□□□□ -1.21
PSH1YOL054W FIG4P42837 879 aa7.49□□□□□ -1.21
PSH1YOL054W FRA1Q07825 749 aa7.49□□□□□ -1.21
PSH1YOL054W RRN7P40992 514 aa7.48□□□□□ -1.21
PSH1YOL054W NUP159P40477 1460 aa7.48□□□□□ -1.21
PSH1YOL054W PDC1P06169 563 aaKnown RBP7.47□□□□□ -1.21
PSH1YOL054W CDC4P07834 779 aa7.46□□□□□ -1.22
PSH1YOL054W PAC1P39946 494 aaKnown RBP7.46□□□□□ -1.22
PSH1YOL054W FRK1Q03002 865 aaPredicted RBP7.46□□□□□ -1.22
PSH1YOL054W ARO1P08566 1588 aaKnown RBP7.46□□□□□ -1.22
PSH1YOL054W PHO87P25360 923 aa7.45□□□□□ -1.22
PSH1YOL054W GBP2P25555 427 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
PSH1YOL054W SOH1P38633 127 aa7.45□□□□□ -1.22
PSH1YOL054W NOP7P53261 605 aaKnown RBP7.45□□□□□ -1.22
PSH1YOL054W UTP13Q05946 817 aaKnown RBP7.45□□□□□ -1.22
PSH1YOL054W PDR5P33302 1511 aaKnown RBP7.44□□□□□ -1.22
PSH1YOL054W GDB1Q06625 1536 aa7.44□□□□□ -1.22
PSH1YOL054W HAP4P14064 554 aa7.44□□□□□ -1.22
PSH1YOL054W HEM3P28789 327 aa7.44□□□□□ -1.22
PSH1YOL054W BDP1P46678 594 aa7.44□□□□□ -1.22
PSH1YOL054W YPR084WQ06821 456 aa7.44□□□□□ -1.22
PSH1YOL054W SPT7P35177 1332 aa7.44□□□□□ -1.22
PSH1YOL054W STM1P39015 273 aaKnown RBP7.43□□□□□ -1.22
PSH1YOL054W HXT10P43581 546 aa7.43□□□□□ -1.22
PSH1YOL054W SNU71P53207 620 aaKnown RBP7.43□□□□□ -1.22
PSH1YOL054W PDR12Q02785 1511 aa7.42□□□□□ -1.22
PSH1YOL054W MET22P32179 357 aa7.42□□□□□ -1.22
PSH1YOL054W SEN54Q02825 467 aaPredicted RBP7.42□□□□□ -1.22
PSH1YOL054W KAR5Q04746 504 aa7.42□□□□□ -1.22
PSH1YOL054W PUF6Q04373 656 aaKnown RBP7.41□□□□□ -1.22
PSH1YOL054W YBL113CQ7M4S9 792 aa7.41□□□□□ -1.22
PSH1YOL054W SEC20P28791 383 aa7.4□□□□□ -1.22
PSH1YOL054W APL6P46682 809 aa7.4□□□□□ -1.22
PSH1YOL054W HED1Q03937 162 aa7.4□□□□□ -1.22
PSH1YOL054W DNF2Q12675 1612 aa7.4□□□□□ -1.22
PSH1YOL054W IQG1Q12280 1495 aa7.39□□□□□ -1.23
PSH1YOL054W VAC17P25591 423 aa7.39□□□□□ -1.23
PSH1YOL054W RRD1P40454 393 aaKnown RBP7.39□□□□□ -1.23
PSH1YOL054W ACS2P52910 683 aaKnown RBP7.39□□□□□ -1.23
PSH1YOL054W GAS4Q08271 471 aa7.39□□□□□ -1.23
PSH1YOL054W TSC13Q99190 310 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms