RNA–Protein interactions for RNA: YNR038W

DBP6, Transcript of Essential protein involved in ribosome biogenesis, yeast

Gene DBP6, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP6	YNR038W	ATG3	P40344	310 aa		4.22	□□□□□ -1.73
DBP6	YNR038W	SUM1	P46676	1062 aa		4.22	□□□□□ -1.73
DBP6	YNR038W	YMR265C	Q03508	461 aa	Known RBP	4.22	□□□□□ -1.73
DBP6	YNR038W	AHP1	P38013	176 aa	Known RBP	4.22	□□□□□ -1.73
DBP6	YNR038W	SLX8	P40072	274 aa		4.22	□□□□□ -1.73
DBP6	YNR038W	PKC1	P24583	1151 aa		4.21	□□□□□ -1.74
DBP6	YNR038W	KRE33	P53914	1056 aa	Known RBP	4.21	□□□□□ -1.74
DBP6	YNR038W	THI72	Q08579	599 aa		4.21	□□□□□ -1.74
DBP6	YNR038W	BIO2	P32451	375 aa		4.2	□□□□□ -1.74
DBP6	YNR038W	ADE12	P80210	433 aa	Known RBP	4.2	□□□□□ -1.74
DBP6	YNR038W	HDA3	Q06623	655 aa		4.2	□□□□□ -1.74
DBP6	YNR038W	SOH1	P38633	127 aa		4.2	□□□□□ -1.74
DBP6	YNR038W	UTP7	P40055	554 aa	Known RBP	4.2	□□□□□ -1.74
DBP6	YNR038W	JJJ2	P46997	583 aa		4.2	□□□□□ -1.74
DBP6	YNR038W	IRE1	P32361	1115 aa		4.18	□□□□□ -1.74
DBP6	YNR038W	ENO2	P00925	437 aa	Known RBP	4.18	□□□□□ -1.74
DBP6	YNR038W	CCT8	P47079	568 aa	Known RBP	4.18	□□□□□ -1.74
DBP6	YNR038W	SHM1	P37292	490 aa	Predicted RBP	4.17	□□□□□ -1.74
DBP6	YNR038W	ALA1	P40825	983 aa	Known RBP	4.17	□□□□□ -1.74
DBP6	YNR038W	RIM21	P48565	533 aa		4.17	□□□□□ -1.74
DBP6	YNR038W	YPQ2	Q06328	317 aa		4.17	□□□□□ -1.74
DBP6	YNR038W	YNL108C	P53929	270 aa		4.16	□□□□□ -1.74
DBP6	YNR038W	SKN7	P38889	622 aa		4.15	□□□□□ -1.74
DBP6	YNR038W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
DBP6	YNR038W	YPR053C	Q6Q5F3	151 aa		4.15	□□□□□ -1.74
DBP6	YNR038W	GPM1	P00950	247 aa	Known RBP	4.15	□□□□□ -1.75
DBP6	YNR038W	RDS2	P19541	446 aa	Known RBP	4.15	□□□□□ -1.75
DBP6	YNR038W	PSH1	Q12161	406 aa		4.15	□□□□□ -1.75
DBP6	YNR038W	RPS31	P05759	152 aa	Known RBP	4.14	□□□□□ -1.75
DBP6	YNR038W	SWI5	P08153	709 aa		4.14	□□□□□ -1.75
DBP6	YNR038W	FPS1	P23900	669 aa		4.14	□□□□□ -1.75
DBP6	YNR038W	PDC6	P26263	563 aa	Known RBP	4.14	□□□□□ -1.75
DBP6	YNR038W	SBE2	P42223	864 aa	Known RBP	4.14	□□□□□ -1.75
DBP6	YNR038W	TDA6	Q06466	467 aa		4.14	□□□□□ -1.75
DBP6	YNR038W	MRPL16	P38064	232 aa		4.13	□□□□□ -1.75
DBP6	YNR038W	MCX1	P38323	520 aa	Predicted RBP	4.13	□□□□□ -1.75
DBP6	YNR038W	AIM9	P40053	627 aa	Known RBP	4.13	□□□□□ -1.75
DBP6	YNR038W	SPR3	P41901	512 aa		4.13	□□□□□ -1.75
DBP6	YNR038W	MCM1	P11746	286 aa		4.12	□□□□□ -1.75
DBP6	YNR038W	YMR187C	Q03236	431 aa		4.12	□□□□□ -1.75
DBP6	YNR038W	MRX10	Q05648	414 aa		4.12	□□□□□ -1.75
DBP6	YNR038W	LEU1	P07264	779 aa	Known RBP	4.11	□□□□□ -1.75
DBP6	YNR038W	YFL034W	P43564	1073 aa		4.11	□□□□□ -1.75
DBP6	YNR038W	KNS1	P32350	737 aa	Predicted RBP	4.11	□□□□□ -1.75
DBP6	YNR038W	YJL007C	P47080	104 aa		4.11	□□□□□ -1.75
DBP6	YNR038W	RPS6A	P0CX37	236 aa	Known RBP	4.1	□□□□□ -1.75
DBP6	YNR038W	RPS6B	P0CX38	236 aa	Predicted RBP	4.1	□□□□□ -1.75
DBP6	YNR038W	YNR014W	P53719	212 aa		4.1	□□□□□ -1.75
DBP6	YNR038W	STB3	Q12427	513 aa		4.1	□□□□□ -1.75
DBP6	YNR038W	PDC5	P16467	563 aa	Known RBP	4.09	□□□□□ -1.75
DBP6	YNR038W	ALD2	P47771	506 aa		4.09	□□□□□ -1.75
DBP6	YNR038W	TY1A-DR2	Q03964	440 aa	Known RBP	4.09	□□□□□ -1.75
DBP6	YNR038W	RPP1A	P05318	106 aa	Predicted RBP	4.09	□□□□□ -1.76
DBP6	YNR038W	MET1	P36150	593 aa		4.09	□□□□□ -1.76
DBP6	YNR038W	BOI2	P39969	1040 aa		4.09	□□□□□ -1.76
DBP6	YNR038W	TSC13	Q99190	310 aa		4.09	□□□□□ -1.76
DBP6	YNR038W	YCK2	P23292	546 aa	Known RBP	4.08	□□□□□ -1.76
DBP6	YNR038W	NTH2	P35172	780 aa		4.08	□□□□□ -1.76
DBP6	YNR038W	MSC7	P38694	644 aa		4.08	□□□□□ -1.76
DBP6	YNR038W	YNL165W	P53891	406 aa		4.08	□□□□□ -1.76
DBP6	YNR038W	ENO1	P00924	437 aa	Known RBP	4.07	□□□□□ -1.76
DBP6	YNR038W	PEP12	P32854	288 aa		4.07	□□□□□ -1.76
DBP6	YNR038W	BIM1	P40013	344 aa		4.07	□□□□□ -1.76
DBP6	YNR038W	TIF1	P10081	395 aa	Known RBP	4.07	□□□□□ -1.76
DBP6	YNR038W	RGP1	P16664	663 aa		4.07	□□□□□ -1.76
DBP6	YNR038W	ATG32	P40458	529 aa		4.07	□□□□□ -1.76
DBP6	YNR038W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
DBP6	YNR038W	YDR215C	Q12240	137 aa		4.07	□□□□□ -1.76
DBP6	YNR038W	PDI1	P17967	522 aa	Known RBP	4.06	□□□□□ -1.76
DBP6	YNR038W	RTG2	P32608	588 aa	Known RBP	4.05	□□□□□ -1.76
DBP6	YNR038W	YTA6	P40328	754 aa		4.05	□□□□□ -1.76
DBP6	YNR038W	SBP1	P10080	294 aa	Known RBP	4.05	□□□□□ -1.76
DBP6	YNR038W	MLF3	P32047	452 aa		4.05	□□□□□ -1.76
DBP6	YNR038W	HGH1	P48362	394 aa	Known RBP	4.05	□□□□□ -1.76
DBP6	YNR038W	SLN1	P39928	1220 aa	Predicted RBP	4.04	□□□□□ -1.76
DBP6	YNR038W	UTP4	Q06679	776 aa	Known RBP	4.04	□□□□□ -1.76
DBP6	YNR038W	Q0182	Q9ZZW1	134 aa		4.04	□□□□□ -1.76
DBP6	YNR038W	CYT1	P07143	309 aa		4.03	□□□□□ -1.76
DBP6	YNR038W	AMN1	P38285	549 aa	Predicted RBP	4.03	□□□□□ -1.76
DBP6	YNR038W	HEH2	Q03281	663 aa		4.03	□□□□□ -1.76
DBP6	YNR038W	UBP1	P25037	809 aa		4.03	□□□□□ -1.77
DBP6	YNR038W	SKP1	P52286	194 aa		4.03	□□□□□ -1.77
DBP6	YNR038W	RPL34B	P40525	121 aa	Known RBP	4.02	□□□□□ -1.77
DBP6	YNR038W	ACS2	P52910	683 aa	Known RBP	4.02	□□□□□ -1.77
DBP6	YNR038W	PHO87	P25360	923 aa		4.01	□□□□□ -1.77
DBP6	YNR038W	HAP4	P14064	554 aa		4.01	□□□□□ -1.77
DBP6	YNR038W	TAT1	P38085	619 aa		4.01	□□□□□ -1.77
DBP6	YNR038W	LSB6	P42951	607 aa		4.01	□□□□□ -1.77
DBP6	YNR038W	MCA1	Q08601	432 aa		4.01	□□□□□ -1.77
DBP6	YNR038W	NGR1	P32831	672 aa	Known RBP	4	□□□□□ -1.77
DBP6	YNR038W	SCD5	P34758	872 aa		4	□□□□□ -1.77
DBP6	YNR038W	SIS2	P36024	562 aa		4	□□□□□ -1.77
DBP6	YNR038W	HXT5	P38695	592 aa		4	□□□□□ -1.77
DBP6	YNR038W	GAS4	Q08271	471 aa		4	□□□□□ -1.77
DBP6	YNR038W	TPS3	P38426	1054 aa	Known RBP	3.99	□□□□□ -1.77
DBP6	YNR038W	PRK1	P40494	810 aa		3.99	□□□□□ -1.77
DBP6	YNR038W	MTO1	P53070	669 aa		3.99	□□□□□ -1.77
DBP6	YNR038W	NHA1	Q99271	985 aa		3.99	□□□□□ -1.77
DBP6	YNR038W	KAP122	P32767	1081 aa		3.98	□□□□□ -1.77
DBP6	YNR038W	NCL1	P38205	684 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 982.6 ms