RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C TY1A-DR3Q12441 440 aa5.6□□□□□ -1.51
CIT1YNR001C UTR2P32623 467 aa5.59□□□□□ -1.51
CIT1YNR001C SLA1P32790 1244 aa5.59□□□□□ -1.51
CIT1YNR001C YJL007CP47080 104 aa5.59□□□□□ -1.51
CIT1YNR001C MDJ1P35191 511 aa5.57□□□□□ -1.52
CIT1YNR001C DLD3P39976 496 aaKnown RBP5.57□□□□□ -1.52
CIT1YNR001C SLX8P40072 274 aa5.57□□□□□ -1.52
CIT1YNR001C UTP13Q05946 817 aaKnown RBP5.57□□□□□ -1.52
CIT1YNR001C HDA3Q06623 655 aa5.57□□□□□ -1.52
CIT1YNR001C DAT1P13483 248 aaKnown RBP5.57□□□□□ -1.52
CIT1YNR001C UTP7P40055 554 aaKnown RBP5.57□□□□□ -1.52
CIT1YNR001C ATG32P40458 529 aa5.57□□□□□ -1.52
CIT1YNR001C NSG2P53898 299 aa5.57□□□□□ -1.52
CIT1YNR001C BIM1P40013 344 aa5.56□□□□□ -1.52
CIT1YNR001C YPP1P46951 817 aa5.56□□□□□ -1.52
CIT1YNR001C MRX10Q05648 414 aa5.56□□□□□ -1.52
CIT1YNR001C SSA1P10591 642 aaKnown RBP5.55□□□□□ -1.52
CIT1YNR001C NAP1P25293 417 aaKnown RBP5.55□□□□□ -1.52
CIT1YNR001C MSN5P52918 1224 aa5.55□□□□□ -1.52
CIT1YNR001C TY1B-DR4Q07793 1604 aa5.54□□□□□ -1.52
CIT1YNR001C TIF1P10081 395 aaKnown RBP5.54□□□□□ -1.52
CIT1YNR001C CUZ1P53899 274 aa5.54□□□□□ -1.52
CIT1YNR001C ENO1P00924 437 aaKnown RBP5.53□□□□□ -1.52
CIT1YNR001C RPP2BP02400 110 aaKnown RBP5.53□□□□□ -1.52
CIT1YNR001C AI1P03875 834 aa5.53□□□□□ -1.52
CIT1YNR001C GEF1P37020 779 aa5.53□□□□□ -1.52
CIT1YNR001C SHM1P37292 490 aaPredicted RBP5.53□□□□□ -1.52
CIT1YNR001C YFL066CP43538 392 aa5.53□□□□□ -1.52
CIT1YNR001C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
CIT1YNR001C REV3P14284 1504 aa5.52□□□□□ -1.53
CIT1YNR001C SUM1P46676 1062 aa5.52□□□□□ -1.53
CIT1YNR001C CCT8P47079 568 aaKnown RBP5.52□□□□□ -1.53
CIT1YNR001C NOP7P53261 605 aaKnown RBP5.52□□□□□ -1.53
CIT1YNR001C NRD1P53617 575 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
CIT1YNR001C TBS1P38114 1094 aa5.51□□□□□ -1.53
CIT1YNR001C ATG3P40344 310 aa5.51□□□□□ -1.53
CIT1YNR001C UBP15P50101 1230 aa5.51□□□□□ -1.53
CIT1YNR001C NOP8Q08287 484 aaPredicted RBP5.5□□□□□ -1.53
CIT1YNR001C THI72Q08579 599 aa5.5□□□□□ -1.53
CIT1YNR001C SWI5P08153 709 aa5.49□□□□□ -1.53
CIT1YNR001C JJJ2P46997 583 aa5.49□□□□□ -1.53
CIT1YNR001C YPQ2Q06328 317 aa5.49□□□□□ -1.53
CIT1YNR001C PEP12P32854 288 aa5.48□□□□□ -1.53
CIT1YNR001C ECM5Q03214 1411 aa5.48□□□□□ -1.53
CIT1YNR001C RPS31P05759 152 aaKnown RBP5.48□□□□□ -1.53
CIT1YNR001C DIT1P21623 536 aa5.48□□□□□ -1.53
CIT1YNR001C RTG2P32608 588 aaKnown RBP5.48□□□□□ -1.53
CIT1YNR001C CEM1P39525 442 aa5.48□□□□□ -1.53
CIT1YNR001C AIM9P40053 627 aaKnown RBP5.48□□□□□ -1.53
CIT1YNR001C SLD2P34252 453 aa5.47□□□□□ -1.53
CIT1YNR001C SYT1Q06836 1226 aa5.47□□□□□ -1.53
CIT1YNR001C SUB2Q07478 446 aaKnown RBP5.47□□□□□ -1.53
CIT1YNR001C PSH1Q12161 406 aa5.47□□□□□ -1.53
CIT1YNR001C YPR053CQ6Q5F3 151 aa5.47□□□□□ -1.53
CIT1YNR001C IRE1P32361 1115 aa5.46□□□□□ -1.54
CIT1YNR001C AHP1P38013 176 aaKnown RBP5.46□□□□□ -1.54
CIT1YNR001C ALA1P40825 983 aaKnown RBP5.46□□□□□ -1.54
CIT1YNR001C RPS6AP0CX37 236 aaKnown RBP5.45□□□□□ -1.54
CIT1YNR001C RPS6BP0CX38 236 aaPredicted RBP5.45□□□□□ -1.54
CIT1YNR001C YNL165WP53891 406 aa5.45□□□□□ -1.54
CIT1YNR001C YMR265CQ03508 461 aaKnown RBP5.45□□□□□ -1.54
CIT1YNR001C PDC6P26263 563 aaKnown RBP5.44□□□□□ -1.54
CIT1YNR001C PDI1P17967 522 aaKnown RBP5.43□□□□□ -1.54
CIT1YNR001C SSA4P22202 642 aaKnown RBP5.43□□□□□ -1.54
CIT1YNR001C NTH2P35172 780 aa5.43□□□□□ -1.54
CIT1YNR001C KRE33P53914 1056 aaKnown RBP5.43□□□□□ -1.54
CIT1YNR001C ORC1P54784 914 aaPredicted RBP5.43□□□□□ -1.54
CIT1YNR001C ADE12P80210 433 aaKnown RBP5.43□□□□□ -1.54
CIT1YNR001C IOC4Q04213 475 aa5.43□□□□□ -1.54
CIT1YNR001C YDR461C-AQ2V2P7 80 aa5.43□□□□□ -1.54
CIT1YNR001C SKN7P38889 622 aa5.42□□□□□ -1.54
CIT1YNR001C RPL34BP40525 121 aaKnown RBP5.41□□□□□ -1.54
CIT1YNR001C SNU71P53207 620 aaKnown RBP5.41□□□□□ -1.54
CIT1YNR001C RPL34AP87262 121 aaPredicted RBP5.41□□□□□ -1.54
CIT1YNR001C TSC13Q99190 310 aa5.41□□□□□ -1.54
CIT1YNR001C KTR7P40504 517 aa5.4□□□□□ -1.54
CIT1YNR001C ALD2P47771 506 aa5.4□□□□□ -1.54
CIT1YNR001C MCM1P11746 286 aa5.4□□□□□ -1.55
CIT1YNR001C ACS2P52910 683 aaKnown RBP5.4□□□□□ -1.55
CIT1YNR001C LEU1P07264 779 aaKnown RBP5.39□□□□□ -1.55
CIT1YNR001C MRPL16P38064 232 aa5.39□□□□□ -1.55
CIT1YNR001C YFL034WP43564 1073 aa5.39□□□□□ -1.55
CIT1YNR001C SBP1P10080 294 aaKnown RBP5.38□□□□□ -1.55
CIT1YNR001C SPR3P41901 512 aa5.38□□□□□ -1.55
CIT1YNR001C SBE2P42223 864 aaKnown RBP5.38□□□□□ -1.55
CIT1YNR001C TDA6Q06466 467 aa5.38□□□□□ -1.55
CIT1YNR001C MET10P39692 1035 aa5.37□□□□□ -1.55
CIT1YNR001C YMR187CQ03236 431 aa5.37□□□□□ -1.55
CIT1YNR001C STB3Q12427 513 aa5.37□□□□□ -1.55
CIT1YNR001C TCB3Q03640 1545 aaKnown RBP5.36□□□□□ -1.55
CIT1YNR001C BNI1P41832 1953 aa5.36□□□□□ -1.55
CIT1YNR001C CYT1P07143 309 aa5.36□□□□□ -1.55
CIT1YNR001C PHO87P25360 923 aa5.36□□□□□ -1.55
CIT1YNR001C MLF3P32047 452 aa5.36□□□□□ -1.55
CIT1YNR001C GPM1P00950 247 aaKnown RBP5.35□□□□□ -1.55
CIT1YNR001C TTI1P36097 1038 aa5.34□□□□□ -1.55
CIT1YNR001C MCX1P38323 520 aaPredicted RBP5.34□□□□□ -1.55
CIT1YNR001C MSC7P38694 644 aa5.34□□□□□ -1.55
CIT1YNR001C ROM1P53046 1155 aa5.34□□□□□ -1.55
CIT1YNR001C Q0182Q9ZZW1 134 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms