RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A GEA2P39993 1459 aaKnown RBP6.16□□□□□ -1.42
YSF3YNL138W-A GAL2P13181 574 aa6.16□□□□□ -1.42
YSF3YNL138W-A DAT1P13483 248 aaKnown RBP6.16□□□□□ -1.42
YSF3YNL138W-A PDI1P17967 522 aaKnown RBP6.16□□□□□ -1.42
YSF3YNL138W-A UTR2P32623 467 aa6.16□□□□□ -1.42
YSF3YNL138W-A YJR115WP47152 169 aa6.16□□□□□ -1.42
YSF3YNL138W-A MMS1Q06211 1407 aa6.16□□□□□ -1.42
YSF3YNL138W-A UFD4P33202 1483 aa6.15□□□□□ -1.42
YSF3YNL138W-A ACS2P52910 683 aaKnown RBP6.15□□□□□ -1.42
YSF3YNL138W-A SPT2P06843 333 aaPredicted RBP6.14□□□□□ -1.43
YSF3YNL138W-A PHO87P25360 923 aa6.14□□□□□ -1.43
YSF3YNL138W-A AIM9P40053 627 aaKnown RBP6.14□□□□□ -1.43
YSF3YNL138W-A TSC13Q99190 310 aa6.14□□□□□ -1.43
YSF3YNL138W-A RTT106P40161 455 aa6.13□□□□□ -1.43
YSF3YNL138W-A BRE2P43132 505 aa6.13□□□□□ -1.43
YSF3YNL138W-A PTK2P47116 818 aaKnown RBP6.13□□□□□ -1.43
YSF3YNL138W-A WTM2Q12206 467 aa6.13□□□□□ -1.43
YSF3YNL138W-A ARG82P07250 355 aa6.12□□□□□ -1.43
YSF3YNL138W-A SIN3P22579 1536 aa6.12□□□□□ -1.43
YSF3YNL138W-A UBX7P38349 436 aa6.12□□□□□ -1.43
YSF3YNL138W-A SLX8P40072 274 aa6.12□□□□□ -1.43
YSF3YNL138W-A AAD14P42884 376 aa6.12□□□□□ -1.43
YSF3YNL138W-A GCR2Q01722 534 aa6.12□□□□□ -1.43
YSF3YNL138W-A TY1B-BRQ12193 1756 aa6.12□□□□□ -1.43
YSF3YNL138W-A TY1B-GR3Q12316 1755 aa6.12□□□□□ -1.43
YSF3YNL138W-A TY1B-ORQ92393 1755 aa6.12□□□□□ -1.43
YSF3YNL138W-A CHD1P32657 1468 aa6.11□□□□□ -1.43
YSF3YNL138W-A HAP4P14064 554 aa6.11□□□□□ -1.43
YSF3YNL138W-A NTH2P35172 780 aa6.11□□□□□ -1.43
YSF3YNL138W-A TBS1P38114 1094 aa6.11□□□□□ -1.43
YSF3YNL138W-A YFL034WP43564 1073 aa6.11□□□□□ -1.43
YSF3YNL138W-A ROM1P53046 1155 aa6.11□□□□□ -1.43
YSF3YNL138W-A SRF1Q12516 437 aa6.11□□□□□ -1.43
YSF3YNL138W-A SWI5P08153 709 aa6.1□□□□□ -1.43
YSF3YNL138W-A RPP2BP02400 110 aaKnown RBP6.09□□□□□ -1.43
YSF3YNL138W-A RPS6AP0CX37 236 aaKnown RBP6.09□□□□□ -1.43
YSF3YNL138W-A RPS6BP0CX38 236 aaPredicted RBP6.09□□□□□ -1.43
YSF3YNL138W-A SSA1P10591 642 aaKnown RBP6.09□□□□□ -1.43
YSF3YNL138W-A DLD1P32891 587 aa6.09□□□□□ -1.43
YSF3YNL138W-A UTP7P40055 554 aaKnown RBP6.09□□□□□ -1.43
YSF3YNL138W-A TY2B-LR1P0C2J3 1770 aa6.08□□□□□ -1.44
YSF3YNL138W-A TY2B-FP0CX63 1770 aa6.08□□□□□ -1.44
YSF3YNL138W-A TY2B-GR2P0CX64 1770 aa6.08□□□□□ -1.44
YSF3YNL138W-A TY2B-CP25384 1770 aa6.08□□□□□ -1.44
YSF3YNL138W-A TY2B-DR2Q03494 1770 aa6.08□□□□□ -1.44
YSF3YNL138W-A TY1B-DR1Q03855 1755 aa6.08□□□□□ -1.44
YSF3YNL138W-A TY2B-DR3Q07791 1770 aaKnown RBP6.08□□□□□ -1.44
YSF3YNL138W-A TY2B-OR1Q12113 1770 aa6.08□□□□□ -1.44
YSF3YNL138W-A TY2B-DR1Q12472 1770 aa6.08□□□□□ -1.44
YSF3YNL138W-A TY2B-OR2Q12501 1770 aa6.08□□□□□ -1.44
YSF3YNL138W-A ESP1Q03018 1630 aa6.08□□□□□ -1.44
YSF3YNL138W-A DNF2Q12675 1612 aa6.08□□□□□ -1.44
YSF3YNL138W-A DLD3P39976 496 aaKnown RBP6.08□□□□□ -1.44
YSF3YNL138W-A GAS4Q08271 471 aa6.08□□□□□ -1.44
YSF3YNL138W-A NUP85P46673 744 aa6.07□□□□□ -1.44
YSF3YNL138W-A SCC2Q04002 1493 aa6.05□□□□□ -1.44
YSF3YNL138W-A CYT1P07143 309 aa6.05□□□□□ -1.44
YSF3YNL138W-A RPL34AP87262 121 aaPredicted RBP6.05□□□□□ -1.44
YSF3YNL138W-A GEF1P37020 779 aa6.04□□□□□ -1.44
YSF3YNL138W-A LSC2P53312 427 aa6.04□□□□□ -1.44
YSF3YNL138W-A YRF1-1P0CX20 1796 aa6.03□□□□□ -1.44
YSF3YNL138W-A YRF1-5P0CX21 1796 aa6.03□□□□□ -1.44
YSF3YNL138W-A YRF1-8P0CX22 1796 aa6.03□□□□□ -1.44
YSF3YNL138W-A VAN1P23642 535 aa6.03□□□□□ -1.44
YSF3YNL138W-A SUM1P46676 1062 aa6.03□□□□□ -1.44
YSF3YNL138W-A YJR098CP47139 656 aa6.03□□□□□ -1.44
YSF3YNL138W-A PAN1P32521 1480 aa6.02□□□□□ -1.44
YSF3YNL138W-A MET22P32179 357 aa6.02□□□□□ -1.45
YSF3YNL138W-A UBP1P25037 809 aa6.01□□□□□ -1.45
YSF3YNL138W-A TPS3P38426 1054 aaKnown RBP6.01□□□□□ -1.45
YSF3YNL138W-A SSN3P39073 555 aa6.01□□□□□ -1.45
YSF3YNL138W-A ALA1P40825 983 aaKnown RBP6.01□□□□□ -1.45
YSF3YNL138W-A YPQ2Q06328 317 aa6.01□□□□□ -1.45
YSF3YNL138W-A OPT2Q06593 877 aa6.01□□□□□ -1.45
YSF3YNL138W-A TCB1Q12466 1186 aa6.01□□□□□ -1.45
YSF3YNL138W-A YOR093CQ12275 1648 aa6□□□□□ -1.45
YSF3YNL138W-A SUV3P32580 737 aa6□□□□□ -1.45
YSF3YNL138W-A CWC15Q03772 175 aaKnown RBP6□□□□□ -1.45
YSF3YNL138W-A PUF6Q04373 656 aaKnown RBP6□□□□□ -1.45
YSF3YNL138W-A PUN1Q06991 263 aa6□□□□□ -1.45
YSF3YNL138W-A TRS33Q99394 268 aa6□□□□□ -1.45
YSF3YNL138W-A DRS2P39524 1355 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-HO13535 1793 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-DR5P0C2I2 1755 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-DR6P0C2I3 1755 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-LR2P0C2I5 1755 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-LR3P0C2I6 1755 aaKnown RBP6□□□□□ -1.45
YSF3YNL138W-A TY1B-PR1P0C2I9 1755 aaKnown RBP6□□□□□ -1.45
YSF3YNL138W-A TY1B-PR2P0C2J0 1756 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-PR3P0C2J1 1755 aaKnown RBP6□□□□□ -1.45
YSF3YNL138W-A TY1B-JR1P47098 1755 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-ML2Q03434 1755 aaKnown RBP6□□□□□ -1.45
YSF3YNL138W-A TY1B-ER1Q03612 1755 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-ML1Q04711 1755 aaKnown RBP6□□□□□ -1.45
YSF3YNL138W-A TY1B-GR2Q12269 1755 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-OLQ12273 1755 aa6□□□□□ -1.45
YSF3YNL138W-A TY1B-PLQ12414 1755 aaKnown RBP6□□□□□ -1.45
YSF3YNL138W-A TY2B-BQ12491 1770 aa5.98□□□□□ -1.45
YSF3YNL138W-A NGR1P32831 672 aaKnown RBP5.98□□□□□ -1.45
YSF3YNL138W-A MSN5P52918 1224 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms