RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W YGR122WP53272 402 aa11.57□□□□□ -0.56
LIP1YMR298W MDG1P53885 366 aa11.57□□□□□ -0.56
LIP1YMR298W RIM15P43565 1770 aa11.56□□□□□ -0.56
LIP1YMR298W ILV3P39522 585 aaKnown RBP11.56□□□□□ -0.56
LIP1YMR298W YJR008WP47085 338 aa11.56□□□□□ -0.56
LIP1YMR298W HGH1P48362 394 aaKnown RBP11.56□□□□□ -0.56
LIP1YMR298W MST1P07236 462 aa11.55□□□□□ -0.56
LIP1YMR298W NUP133P36161 1157 aa11.55□□□□□ -0.56
LIP1YMR298W BOI2P39969 1040 aa11.55□□□□□ -0.56
LIP1YMR298W SWI1P09547 1314 aa11.55□□□□□ -0.56
LIP1YMR298W GCD7P32502 381 aaPredicted RBP11.54□□□□□ -0.56
LIP1YMR298W PRP40P33203 583 aaKnown RBP11.54□□□□□ -0.56
LIP1YMR298W TUM1Q08686 304 aaKnown RBP11.54□□□□□ -0.56
LIP1YMR298W YAP5P40574 245 aa11.53□□□□□ -0.56
LIP1YMR298W VPS64Q03944 604 aa11.53□□□□□ -0.56
LIP1YMR298W CST9Q06032 482 aa11.53□□□□□ -0.56
LIP1YMR298W PHM7Q12252 991 aa11.53□□□□□ -0.56
LIP1YMR298W SWC3P31376 625 aa11.52□□□□□ -0.57
LIP1YMR298W NMD2P38798 1089 aaKnown RBP11.52□□□□□ -0.57
LIP1YMR298W YJL181WP46987 611 aa11.52□□□□□ -0.57
LIP1YMR298W RPN11P43588 306 aaKnown RBP11.5□□□□□ -0.57
LIP1YMR298W APL2P36000 726 aaPredicted RBP11.49□□□□□ -0.57
LIP1YMR298W MGA2P40578 1113 aa11.49□□□□□ -0.57
LIP1YMR298W YMR074CQ04773 145 aa11.49□□□□□ -0.57
LIP1YMR298W YPR204WQ08995 1032 aa11.49□□□□□ -0.57
LIP1YMR298W MSB4Q12317 492 aa11.49□□□□□ -0.57
LIP1YMR298W RFC1P38630 861 aaKnown RBP11.48□□□□□ -0.57
LIP1YMR298W YIR014WP40570 242 aa11.48□□□□□ -0.57
LIP1YMR298W LPD1P09624 499 aaKnown RBP11.47□□□□□ -0.57
LIP1YMR298W ARG8P18544 423 aa11.47□□□□□ -0.57
LIP1YMR298W SET1P38827 1080 aaKnown RBP11.47□□□□□ -0.57
LIP1YMR298W UBP12P39538 1254 aa11.47□□□□□ -0.57
LIP1YMR298W NKP2Q06162 153 aa11.47□□□□□ -0.57
LIP1YMR298W RAD50P12753 1312 aa11.46□□□□□ -0.57
LIP1YMR298W TEA1P47988 759 aa11.45□□□□□ -0.58
LIP1YMR298W SSF1P38789 453 aaPredicted RBP11.44□□□□□ -0.58
LIP1YMR298W PKH1Q03407 766 aa11.44□□□□□ -0.58
LIP1YMR298W GRE2Q12068 342 aaKnown RBP11.44□□□□□ -0.58
LIP1YMR298W CDC16P09798 840 aa11.43□□□□□ -0.58
LIP1YMR298W UBP1P25037 809 aa11.43□□□□□ -0.58
LIP1YMR298W NPR2P39923 615 aa11.43□□□□□ -0.58
LIP1YMR298W YBL029C-AQ3E756 94 aa11.43□□□□□ -0.58
LIP1YMR298W NCB2Q92317 146 aa11.43□□□□□ -0.58
LIP1YMR298W SER1P33330 395 aaKnown RBP11.42□□□□□ -0.58
LIP1YMR298W BDP1P46678 594 aa11.42□□□□□ -0.58
LIP1YMR298W SUP35P05453 685 aaKnown RBP11.41□□□□□ -0.58
LIP1YMR298W SIS1P25294 352 aaKnown RBP11.41□□□□□ -0.58
LIP1YMR298W GLN1P32288 370 aaKnown RBP11.41□□□□□ -0.58
LIP1YMR298W ITC1P53125 1264 aa11.41□□□□□ -0.58
LIP1YMR298W YGL082WP53155 381 aa11.41□□□□□ -0.58
LIP1YMR298W MTC5Q03897 1148 aa11.41□□□□□ -0.58
LIP1YMR298W NYV1Q12255 253 aa11.41□□□□□ -0.58
LIP1YMR298W PSH1Q12161 406 aa11.4□□□□□ -0.58
LIP1YMR298W UTP10P42945 1769 aaKnown RBP11.4□□□□□ -0.58
LIP1YMR298W OPY1P38271 328 aa11.39□□□□□ -0.59
LIP1YMR298W PIB1Q06651 286 aa11.39□□□□□ -0.59
LIP1YMR298W FCP1Q03254 732 aa11.37□□□□□ -0.59
LIP1YMR298W BUG1Q12191 341 aa11.37□□□□□ -0.59
LIP1YMR298W SSK22P25390 1331 aaPredicted RBP11.36□□□□□ -0.59
LIP1YMR298W GCR2Q01722 534 aa11.36□□□□□ -0.59
LIP1YMR298W SAC3P46674 1301 aa11.35□□□□□ -0.59
LIP1YMR298W PDR18P53756 1333 aa11.35□□□□□ -0.59
LIP1YMR298W NOT3P06102 836 aaKnown RBP11.34□□□□□ -0.59
LIP1YMR298W VAS1P07806 1104 aaKnown RBP11.34□□□□□ -0.59
LIP1YMR298W DLD1P32891 587 aa11.34□□□□□ -0.59
LIP1YMR298W ECM21P38167 1117 aaKnown RBP11.34□□□□□ -0.59
LIP1YMR298W HXT10P43581 546 aa11.34□□□□□ -0.59
LIP1YMR298W MLC1P53141 149 aa11.34□□□□□ -0.59
LIP1YMR298W UTP22P53254 1237 aaPredicted RBP11.34□□□□□ -0.59
LIP1YMR298W HAT1Q12341 374 aa11.34□□□□□ -0.59
LIP1YMR298W IME2P32581 645 aa11.33□□□□□ -0.6
LIP1YMR298W BRN1P38170 754 aa11.33□□□□□ -0.6
LIP1YMR298W YGL242CP53066 181 aa11.33□□□□□ -0.6
LIP1YMR298W GTT3P39996 337 aa11.32□□□□□ -0.6
LIP1YMR298W LYS4P49367 693 aaPredicted RBP11.32□□□□□ -0.6
LIP1YMR298W RAT1Q02792 1006 aaKnown RBP11.32□□□□□ -0.6
LIP1YMR298W WSC3Q12215 556 aa11.32□□□□□ -0.6
LIP1YMR298W SNU66Q12420 587 aaPredicted RBP11.32□□□□□ -0.6
LIP1YMR298W BRE1Q07457 700 aaKnown RBP11.31□□□□□ -0.6
LIP1YMR298W GYP5Q12344 894 aa11.31□□□□□ -0.6
LIP1YMR298W PCT1P13259 424 aa11.3□□□□□ -0.6
LIP1YMR298W DIB1Q06819 143 aaPredicted RBP11.3□□□□□ -0.6
LIP1YMR298W VNX1P42839 908 aa11.28□□□□□ -0.6
LIP1YMR298W ALO1P54783 526 aaKnown RBP11.28□□□□□ -0.6
LIP1YMR298W KTR3P38130 404 aaPredicted RBP11.27□□□□□ -0.61
LIP1YMR298W HXT13P39924 564 aa11.27□□□□□ -0.61
LIP1YMR298W ALD2P47771 506 aa11.27□□□□□ -0.61
LIP1YMR298W ALD3P54114 506 aa11.27□□□□□ -0.61
LIP1YMR298W RMD1Q03441 430 aa11.27□□□□□ -0.61
LIP1YMR298W RLF2Q12495 606 aa11.27□□□□□ -0.61
LIP1YMR298W SLA1P32790 1244 aa11.26□□□□□ -0.61
LIP1YMR298W VPS29P38759 282 aa11.26□□□□□ -0.61
LIP1YMR298W CTH1P47976 325 aa11.26□□□□□ -0.61
LIP1YMR298W EAF7P53911 425 aaKnown RBP11.26□□□□□ -0.61
LIP1YMR298W UBP16Q02863 499 aa11.26□□□□□ -0.61
LIP1YMR298W FPR4Q06205 392 aaPredicted RBP11.26□□□□□ -0.61
LIP1YMR298W CTI6Q08923 506 aa11.26□□□□□ -0.61
LIP1YMR298W SEC18P18759 758 aaKnown RBP11.25□□□□□ -0.61
LIP1YMR298W MRPS35P53292 345 aa11.25□□□□□ -0.61
LIP1YMR298W HXT17P53631 564 aa11.25□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms