RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W YBL036CP38197 257 aa3.16□□□□□ -1.9
HSH155YMR288W YJR115WP47152 169 aa3.16□□□□□ -1.9
HSH155YMR288W ARO1P08566 1588 aaKnown RBP3.16□□□□□ -1.9
HSH155YMR288W MYO4P32492 1471 aa3.16□□□□□ -1.9
HSH155YMR288W TFB3Q03290 321 aa3.16□□□□□ -1.9
HSH155YMR288W SCJ1P25303 377 aa3.16□□□□□ -1.9
HSH155YMR288W PUS6P53294 404 aa3.16□□□□□ -1.9
HSH155YMR288W MLP2P40457 1679 aa3.15□□□□□ -1.9
HSH155YMR288W TUB4P53378 473 aa3.15□□□□□ -1.9
HSH155YMR288W SYH1Q02875 849 aaKnown RBP3.15□□□□□ -1.9
HSH155YMR288W KIP2P28743 706 aa3.15□□□□□ -1.91
HSH155YMR288W VTH1P40438 1549 aa3.15□□□□□ -1.91
HSH155YMR288W VTH2P40890 1549 aa3.15□□□□□ -1.91
HSH155YMR288W TOM1Q03280 3268 aa3.14□□□□□ -1.91
HSH155YMR288W CAF120P53836 1060 aa3.14□□□□□ -1.91
HSH155YMR288W RAD59Q12223 238 aa3.14□□□□□ -1.91
HSH155YMR288W SPP41P38904 1435 aa3.14□□□□□ -1.91
HSH155YMR288W CHC1P22137 1653 aaKnown RBP3.14□□□□□ -1.91
HSH155YMR288W STU1P38198 1513 aa3.13□□□□□ -1.91
HSH155YMR288W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
HSH155YMR288W GDB1Q06625 1536 aa3.13□□□□□ -1.91
HSH155YMR288W TRM1P15565 570 aaKnown RBP3.13□□□□□ -1.91
HSH155YMR288W YJU3P28321 313 aa3.13□□□□□ -1.91
HSH155YMR288W YJL007CP47080 104 aa3.13□□□□□ -1.91
HSH155YMR288W YGR035CP53222 116 aa3.13□□□□□ -1.91
HSH155YMR288W ALR1Q08269 859 aa3.13□□□□□ -1.91
HSH155YMR288W CSE4P36012 229 aa3.12□□□□□ -1.91
HSH155YMR288W MTC5Q03897 1148 aa3.12□□□□□ -1.91
HSH155YMR288W YSP2Q06681 1438 aa3.12□□□□□ -1.91
HSH155YMR288W SNQ2P32568 1501 aaKnown RBP3.12□□□□□ -1.91
HSH155YMR288W KTR1P27810 393 aaKnown RBP3.12□□□□□ -1.91
HSH155YMR288W MOD5P07884 428 aa3.11□□□□□ -1.91
HSH155YMR288W MSB3P48566 633 aaPredicted RBP3.11□□□□□ -1.91
HSH155YMR288W YDL206WQ12424 762 aa3.11□□□□□ -1.91
HSH155YMR288W TSC11P40061 1430 aa3.11□□□□□ -1.91
HSH155YMR288W IXR1P33417 597 aa3.1□□□□□ -1.91
HSH155YMR288W YDL176WQ12027 708 aa3.1□□□□□ -1.91
HSH155YMR288W RPA14P50106 137 aa3.1□□□□□ -1.91
HSH155YMR288W PKC1P24583 1151 aa3.09□□□□□ -1.91
HSH155YMR288W SPT5P27692 1063 aaKnown RBP3.09□□□□□ -1.91
HSH155YMR288W HXT10P43581 546 aa3.09□□□□□ -1.91
HSH155YMR288W PTK2P47116 818 aaKnown RBP3.09□□□□□ -1.91
HSH155YMR288W SCW11P53189 542 aa3.09□□□□□ -1.91
HSH155YMR288W RLF2Q12495 606 aa3.09□□□□□ -1.91
HSH155YMR288W AGE1Q04412 482 aa3.09□□□□□ -1.91
HSH155YMR288W OPT2Q06593 877 aa3.09□□□□□ -1.92
HSH155YMR288W MIP1P15801 1254 aa3.08□□□□□ -1.92
HSH155YMR288W YPP1P46951 817 aa3.08□□□□□ -1.92
HSH155YMR288W APP1P53933 587 aa3.08□□□□□ -1.92
HSH155YMR288W TY3B-GQ99315 1547 aa3.08□□□□□ -1.92
HSH155YMR288W BIM1P40013 344 aa3.08□□□□□ -1.92
HSH155YMR288W YPR097WQ06839 1073 aa3.08□□□□□ -1.92
HSH155YMR288W TY1B-NL2Q99337 1749 aaKnown RBP3.07□□□□□ -1.92
HSH155YMR288W MAK16P10962 306 aaPredicted RBP3.07□□□□□ -1.92
HSH155YMR288W TRK2P28584 889 aa3.07□□□□□ -1.92
HSH155YMR288W YNL108CP53929 270 aa3.07□□□□□ -1.92
HSH155YMR288W IQG1Q12280 1495 aa3.07□□□□□ -1.92
HSH155YMR288W NUP85P46673 744 aa3.06□□□□□ -1.92
HSH155YMR288W VPS13Q07878 3144 aa3.06□□□□□ -1.92
HSH155YMR288W PDC1P06169 563 aaKnown RBP3.06□□□□□ -1.92
HSH155YMR288W ARG82P07250 355 aa3.06□□□□□ -1.92
HSH155YMR288W TEC1P18412 486 aa3.06□□□□□ -1.92
HSH155YMR288W GUT2P32191 649 aa3.06□□□□□ -1.92
HSH155YMR288W GLY1P37303 387 aaKnown RBP3.06□□□□□ -1.92
HSH155YMR288W ATG3P40344 310 aa3.06□□□□□ -1.92
HSH155YMR288W THI12P42883 340 aa3.06□□□□□ -1.92
HSH155YMR288W THI5P43534 340 aa3.06□□□□□ -1.92
HSH155YMR288W THI11P47183 340 aa3.06□□□□□ -1.92
HSH155YMR288W THI13Q07748 340 aa3.06□□□□□ -1.92
HSH155YMR288W TPD3P31383 635 aa3.06□□□□□ -1.92
HSH155YMR288W RSC30P38781 883 aa3.06□□□□□ -1.92
HSH155YMR288W ACO2P39533 789 aa3.06□□□□□ -1.92
HSH155YMR288W RTT106P40161 455 aa3.06□□□□□ -1.92
HSH155YMR288W NAF1P53919 492 aaKnown RBP3.06□□□□□ -1.92
HSH155YMR288W YPR204WQ08995 1032 aa3.06□□□□□ -1.92
HSH155YMR288W RTG2P32608 588 aaKnown RBP3.05□□□□□ -1.92
HSH155YMR288W LSC2P53312 427 aa3.05□□□□□ -1.92
HSH155YMR288W STE20Q03497 939 aaKnown RBP3.05□□□□□ -1.92
HSH155YMR288W MAK10Q02197 733 aa3.05□□□□□ -1.92
HSH155YMR288W ATG32P40458 529 aa3.04□□□□□ -1.92
HSH155YMR288W PUS1Q12211 544 aaKnown RBP3.04□□□□□ -1.92
HSH155YMR288W TIF1P10081 395 aaKnown RBP3.04□□□□□ -1.92
HSH155YMR288W BIO2P32451 375 aa3.04□□□□□ -1.92
HSH155YMR288W UBP2Q01476 1272 aa3.04□□□□□ -1.92
HSH155YMR288W YIR007WP40566 764 aa3.03□□□□□ -1.92
HSH155YMR288W MRX12P47084 519 aa3.03□□□□□ -1.92
HSH155YMR288W MET10P39692 1035 aa3.03□□□□□ -1.93
HSH155YMR288W RPP2BP02400 110 aaKnown RBP3.02□□□□□ -1.93
HSH155YMR288W YDJ1P25491 409 aaKnown RBP3.02□□□□□ -1.93
HSH155YMR288W SIS2P36024 562 aa3.02□□□□□ -1.93
HSH155YMR288W HPF1Q05164 967 aa3.02□□□□□ -1.93
HSH155YMR288W MCM16Q12262 181 aa3.02□□□□□ -1.93
HSH155YMR288W STH1P32597 1359 aa3.02□□□□□ -1.93
HSH155YMR288W BNR1P40450 1375 aa3.02□□□□□ -1.93
HSH155YMR288W FIG4P42837 879 aa3.02□□□□□ -1.93
HSH155YMR288W ENO2P00925 437 aaKnown RBP3.01□□□□□ -1.93
HSH155YMR288W EMP47P43555 445 aa3.01□□□□□ -1.93
HSH155YMR288W YTA7P40340 1379 aa3.01□□□□□ -1.93
HSH155YMR288W SSA4P22202 642 aaKnown RBP3.01□□□□□ -1.93
HSH155YMR288W SUP45P12385 437 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 61.9 ms