RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeast

Gene VTI1, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTI1	YMR197C	ICP55	P40051	511 aa		5.04	□□□□□ -1.6
VTI1	YMR197C	ALA1	P40825	983 aa	Known RBP	5.04	□□□□□ -1.6
VTI1	YMR197C	SUM1	P46676	1062 aa		5.04	□□□□□ -1.6
VTI1	YMR197C	RIM21	P48565	533 aa		5.04	□□□□□ -1.6
VTI1	YMR197C	YMR265C	Q03508	461 aa	Known RBP	5.04	□□□□□ -1.6
VTI1	YMR197C	PUS1	Q12211	544 aa	Known RBP	5.04	□□□□□ -1.6
VTI1	YMR197C	DIT1	P21623	536 aa		5.03	□□□□□ -1.6
VTI1	YMR197C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
VTI1	YMR197C	MDJ1	P35191	511 aa		5.02	□□□□□ -1.61
VTI1	YMR197C	JJJ2	P46997	583 aa		5.02	□□□□□ -1.61
VTI1	YMR197C	RDS2	P19541	446 aa	Known RBP	5.01	□□□□□ -1.61
VTI1	YMR197C	NSG2	P53898	299 aa		5.01	□□□□□ -1.61
VTI1	YMR197C	KRE33	P53914	1056 aa	Known RBP	5.01	□□□□□ -1.61
VTI1	YMR197C	SYT1	Q06836	1226 aa		5.01	□□□□□ -1.61
VTI1	YMR197C	PHM7	Q12252	991 aa		5.01	□□□□□ -1.61
VTI1	YMR197C	AI1	P03875	834 aa		5	□□□□□ -1.61
VTI1	YMR197C	IRE1	P32361	1115 aa		5	□□□□□ -1.61
VTI1	YMR197C	ADE12	P80210	433 aa	Known RBP	5	□□□□□ -1.61
VTI1	YMR197C	SHM1	P37292	490 aa	Predicted RBP	4.99	□□□□□ -1.61
VTI1	YMR197C	AIM9	P40053	627 aa	Known RBP	4.99	□□□□□ -1.61
VTI1	YMR197C	THI72	Q08579	599 aa		4.99	□□□□□ -1.61
VTI1	YMR197C	YDR461C-A	Q2V2P7	80 aa		4.99	□□□□□ -1.61
VTI1	YMR197C	SWI5	P08153	709 aa		4.98	□□□□□ -1.61
VTI1	YMR197C	BIM1	P40013	344 aa		4.98	□□□□□ -1.61
VTI1	YMR197C	ATG32	P40458	529 aa		4.98	□□□□□ -1.61
VTI1	YMR197C	ENO1	P00924	437 aa	Known RBP	4.97	□□□□□ -1.61
VTI1	YMR197C	TIF1	P10081	395 aa	Known RBP	4.97	□□□□□ -1.61
VTI1	YMR197C	YFL066C	P43538	392 aa		4.97	□□□□□ -1.61
VTI1	YMR197C	LSB3	P43603	459 aa	Known RBP	4.97	□□□□□ -1.61
VTI1	YMR197C	MRX10	Q05648	414 aa		4.97	□□□□□ -1.61
VTI1	YMR197C	PDC6	P26263	563 aa	Known RBP	4.96	□□□□□ -1.62
VTI1	YMR197C	HGH1	P48362	394 aa	Known RBP	4.96	□□□□□ -1.62
VTI1	YMR197C	YPQ2	Q06328	317 aa		4.96	□□□□□ -1.62
VTI1	YMR197C	PSH1	Q12161	406 aa		4.96	□□□□□ -1.62
VTI1	YMR197C	RPS6A	P0CX37	236 aa	Known RBP	4.95	□□□□□ -1.62
VTI1	YMR197C	RPS6B	P0CX38	236 aa	Predicted RBP	4.95	□□□□□ -1.62
VTI1	YMR197C	RTG2	P32608	588 aa	Known RBP	4.95	□□□□□ -1.62
VTI1	YMR197C	RPL34B	P40525	121 aa	Known RBP	4.95	□□□□□ -1.62
VTI1	YMR197C	YFL034W	P43564	1073 aa		4.95	□□□□□ -1.62
VTI1	YMR197C	FPS1	P23900	669 aa		4.94	□□□□□ -1.62
VTI1	YMR197C	MRPL16	P38064	232 aa		4.94	□□□□□ -1.62
VTI1	YMR197C	STB3	Q12427	513 aa		4.94	□□□□□ -1.62
VTI1	YMR197C	RPS31	P05759	152 aa	Known RBP	4.93	□□□□□ -1.62
VTI1	YMR197C	NTH2	P35172	780 aa		4.93	□□□□□ -1.62
VTI1	YMR197C	SBE2	P42223	864 aa	Known RBP	4.93	□□□□□ -1.62
VTI1	YMR197C	PDI1	P17967	522 aa	Known RBP	4.92	□□□□□ -1.62
VTI1	YMR197C	TSC13	Q99190	310 aa		4.92	□□□□□ -1.62
VTI1	YMR197C	GPM1	P00950	247 aa	Known RBP	4.91	□□□□□ -1.62
VTI1	YMR197C	PEP12	P32854	288 aa		4.91	□□□□□ -1.62
VTI1	YMR197C	YNL165W	P53891	406 aa		4.91	□□□□□ -1.62
VTI1	YMR197C	TDA6	Q06466	467 aa		4.91	□□□□□ -1.62
VTI1	YMR197C	YPR053C	Q6Q5F3	151 aa		4.91	□□□□□ -1.62
VTI1	YMR197C	MCM1	P11746	286 aa		4.9	□□□□□ -1.63
VTI1	YMR197C	SPR3	P41901	512 aa		4.9	□□□□□ -1.63
VTI1	YMR197C	YNR014W	P53719	212 aa		4.9	□□□□□ -1.63
VTI1	YMR197C	CYT1	P07143	309 aa		4.88	□□□□□ -1.63
VTI1	YMR197C	LEU1	P07264	779 aa	Known RBP	4.88	□□□□□ -1.63
VTI1	YMR197C	MLF3	P32047	452 aa		4.88	□□□□□ -1.63
VTI1	YMR197C	YTA6	P40328	754 aa		4.88	□□□□□ -1.63
VTI1	YMR197C	KTR7	P40504	517 aa		4.88	□□□□□ -1.63
VTI1	YMR197C	CCT8	P47079	568 aa	Known RBP	4.88	□□□□□ -1.63
VTI1	YMR197C	ALD2	P47771	506 aa		4.88	□□□□□ -1.63
VTI1	YMR197C	ACS2	P52910	683 aa	Known RBP	4.87	□□□□□ -1.63
VTI1	YMR197C	YMR187C	Q03236	431 aa		4.87	□□□□□ -1.63
VTI1	YMR197C	Q0182	Q9ZZW1	134 aa		4.87	□□□□□ -1.63
VTI1	YMR197C	PDC5	P16467	563 aa	Known RBP	4.86	□□□□□ -1.63
VTI1	YMR197C	RGP1	P16664	663 aa		4.86	□□□□□ -1.63
VTI1	YMR197C	BOI2	P39969	1040 aa		4.86	□□□□□ -1.63
VTI1	YMR197C	TY1A-DR2	Q03964	440 aa	Known RBP	4.86	□□□□□ -1.63
VTI1	YMR197C	RPP1A	P05318	106 aa	Predicted RBP	4.85	□□□□□ -1.63
VTI1	YMR197C	PHO87	P25360	923 aa		4.85	□□□□□ -1.63
VTI1	YMR197C	KNS1	P32350	737 aa	Predicted RBP	4.85	□□□□□ -1.63
VTI1	YMR197C	SKN7	P38889	622 aa		4.85	□□□□□ -1.63
VTI1	YMR197C	MCX1	P38323	520 aa	Predicted RBP	4.84	□□□□□ -1.63
VTI1	YMR197C	MSC7	P38694	644 aa		4.84	□□□□□ -1.63
VTI1	YMR197C	HAP4	P14064	554 aa		4.83	□□□□□ -1.64
VTI1	YMR197C	MET1	P36150	593 aa		4.83	□□□□□ -1.64
VTI1	YMR197C	LEO1	P38439	464 aa		4.83	□□□□□ -1.64
VTI1	YMR197C	GAS4	Q08271	471 aa		4.83	□□□□□ -1.64
VTI1	YMR197C	GLT1	Q12680	2145 aa	Known RBP	4.82	□□□□□ -1.64
VTI1	YMR197C	UBP1	P25037	809 aa		4.82	□□□□□ -1.64
VTI1	YMR197C	SIS2	P36024	562 aa		4.82	□□□□□ -1.64
VTI1	YMR197C	MTO1	P53070	669 aa		4.82	□□□□□ -1.64
VTI1	YMR197C	YCK2	P23292	546 aa	Known RBP	4.81	□□□□□ -1.64
VTI1	YMR197C	YDR215C	Q12240	137 aa		4.81	□□□□□ -1.64
VTI1	YMR197C	GAL2	P13181	574 aa		4.8	□□□□□ -1.64
VTI1	YMR197C	SCD5	P34758	872 aa		4.8	□□□□□ -1.64
VTI1	YMR197C	ROM1	P53046	1155 aa		4.8	□□□□□ -1.64
VTI1	YMR197C	UTP4	Q06679	776 aa	Known RBP	4.8	□□□□□ -1.64
VTI1	YMR197C	SBP1	P10080	294 aa	Known RBP	4.79	□□□□□ -1.64
VTI1	YMR197C	NGR1	P32831	672 aa	Known RBP	4.79	□□□□□ -1.64
VTI1	YMR197C	SLN1	P39928	1220 aa	Predicted RBP	4.79	□□□□□ -1.64
VTI1	YMR197C	HXT5	P38695	592 aa		4.78	□□□□□ -1.64
VTI1	YMR197C	CUS1	Q02554	436 aa	Predicted RBP	4.78	□□□□□ -1.64
VTI1	YMR197C	HEH2	Q03281	663 aa		4.78	□□□□□ -1.64
VTI1	YMR197C	KAP122	P32767	1081 aa		4.77	□□□□□ -1.65
VTI1	YMR197C	NCL1	P38205	684 aa	Known RBP	4.77	□□□□□ -1.65
VTI1	YMR197C	PRK1	P40494	810 aa		4.77	□□□□□ -1.65
VTI1	YMR197C	SKP1	P52286	194 aa		4.77	□□□□□ -1.65
VTI1	YMR197C	MCA1	Q08601	432 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms