RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C YBT1P32386 1661 aa4.47□□□□□ -1.69
SHH3YMR118C TY2B-BQ12491 1770 aa4.47□□□□□ -1.69
SHH3YMR118C CFT1Q06632 1357 aaKnown RBP4.46□□□□□ -1.7
SHH3YMR118C NRD1P53617 575 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
SHH3YMR118C TY1A-BLQ12266 440 aa4.46□□□□□ -1.7
SHH3YMR118C GDB1Q06625 1536 aa4.46□□□□□ -1.7
SHH3YMR118C CDC25P04821 1589 aa4.45□□□□□ -1.7
SHH3YMR118C ARG82P07250 355 aa4.45□□□□□ -1.7
SHH3YMR118C VAC17P25591 423 aa4.45□□□□□ -1.7
SHH3YMR118C EBP2P36049 427 aaKnown RBP4.45□□□□□ -1.7
SHH3YMR118C PAF1P38351 445 aa4.45□□□□□ -1.7
SHH3YMR118C BUD21Q08492 214 aaPredicted RBP4.45□□□□□ -1.7
SHH3YMR118C GCN2P15442 1659 aa4.45□□□□□ -1.7
SHH3YMR118C ARO1P08566 1588 aaKnown RBP4.44□□□□□ -1.7
SHH3YMR118C YJU3P28321 313 aa4.44□□□□□ -1.7
SHH3YMR118C LSC2P53312 427 aa4.44□□□□□ -1.7
SHH3YMR118C ORC1P54784 914 aaPredicted RBP4.44□□□□□ -1.7
SHH3YMR118C PHM7Q12252 991 aa4.44□□□□□ -1.7
SHH3YMR118C MMS1Q06211 1407 aa4.44□□□□□ -1.7
SHH3YMR118C YBL086CP38177 466 aa4.43□□□□□ -1.7
SHH3YMR118C AAD14P42884 376 aa4.43□□□□□ -1.7
SHH3YMR118C UBP2Q01476 1272 aa4.43□□□□□ -1.7
SHH3YMR118C PDS5Q04264 1277 aa4.43□□□□□ -1.7
SHH3YMR118C DPH6Q12429 685 aa4.43□□□□□ -1.7
SHH3YMR118C TY1B-HO13535 1793 aa4.42□□□□□ -1.7
SHH3YMR118C TY1B-DR5P0C2I2 1755 aa4.42□□□□□ -1.7
SHH3YMR118C TY1B-DR6P0C2I3 1755 aa4.42□□□□□ -1.7
SHH3YMR118C TY1B-LR2P0C2I5 1755 aa4.42□□□□□ -1.7
SHH3YMR118C TY1B-LR3P0C2I6 1755 aaKnown RBP4.42□□□□□ -1.7
SHH3YMR118C TY1B-PR1P0C2I9 1755 aaKnown RBP4.42□□□□□ -1.7
SHH3YMR118C TY1B-PR2P0C2J0 1756 aa4.42□□□□□ -1.7
SHH3YMR118C TY1B-PR3P0C2J1 1755 aaKnown RBP4.42□□□□□ -1.7
SHH3YMR118C TY1B-JR1P47098 1755 aa4.42□□□□□ -1.7
SHH3YMR118C TY1B-ML2Q03434 1755 aaKnown RBP4.42□□□□□ -1.7
SHH3YMR118C TY1B-ER1Q03612 1755 aa4.42□□□□□ -1.7
SHH3YMR118C TY1B-ML1Q04711 1755 aaKnown RBP4.42□□□□□ -1.7
SHH3YMR118C TY1B-GR2Q12269 1755 aa4.42□□□□□ -1.7
SHH3YMR118C TY1B-OLQ12273 1755 aa4.42□□□□□ -1.7
SHH3YMR118C TY1B-PLQ12414 1755 aaKnown RBP4.42□□□□□ -1.7
SHH3YMR118C APP1P53933 587 aa4.42□□□□□ -1.7
SHH3YMR118C ITT1Q04638 464 aa4.42□□□□□ -1.7
SHH3YMR118C IQG1Q12280 1495 aa4.42□□□□□ -1.7
SHH3YMR118C TY3B-IQ7LHG5 1498 aaKnown RBP4.42□□□□□ -1.7
SHH3YMR118C RPC31P17890 251 aa4.41□□□□□ -1.7
SHH3YMR118C IME2P32581 645 aa4.41□□□□□ -1.7
SHH3YMR118C GLC3P32775 704 aa4.41□□□□□ -1.7
SHH3YMR118C DLD1P32891 587 aa4.41□□□□□ -1.7
SHH3YMR118C CLC1P17891 233 aa4.4□□□□□ -1.71
SHH3YMR118C RSC30P38781 883 aa4.4□□□□□ -1.71
SHH3YMR118C YNR021WP53723 404 aaKnown RBP4.4□□□□□ -1.71
SHH3YMR118C PKH3Q03306 898 aaPredicted RBP4.4□□□□□ -1.71
SHH3YMR118C PDR12Q02785 1511 aa4.4□□□□□ -1.71
SHH3YMR118C TY1B-BRQ12193 1756 aa4.4□□□□□ -1.71
SHH3YMR118C TY1B-GR3Q12316 1755 aa4.4□□□□□ -1.71
SHH3YMR118C TY1B-ORQ92393 1755 aa4.4□□□□□ -1.71
SHH3YMR118C NUP157P40064 1391 aaKnown RBP4.4□□□□□ -1.71
SHH3YMR118C ARG8P18544 423 aa4.39□□□□□ -1.71
SHH3YMR118C FPR3P38911 411 aaKnown RBP4.39□□□□□ -1.71
SHH3YMR118C FUN12P39730 1002 aaKnown RBP4.39□□□□□ -1.71
SHH3YMR118C YJR098CP47139 656 aa4.39□□□□□ -1.71
SHH3YMR118C EAF7P53911 425 aaKnown RBP4.39□□□□□ -1.71
SHH3YMR118C TCB1Q12466 1186 aa4.39□□□□□ -1.71
SHH3YMR118C LTE1P07866 1435 aa4.38□□□□□ -1.71
SHH3YMR118C YSP2Q06681 1438 aa4.38□□□□□ -1.71
SHH3YMR118C RPP0P05317 312 aaKnown RBP4.38□□□□□ -1.71
SHH3YMR118C OPY1P38271 328 aa4.38□□□□□ -1.71
SHH3YMR118C EMW1P42842 904 aaKnown RBP4.38□□□□□ -1.71
SHH3YMR118C YFR016CP43597 1233 aaKnown RBP4.38□□□□□ -1.71
SHH3YMR118C CDC45Q08032 650 aa4.38□□□□□ -1.71
SHH3YMR118C NTE1Q04958 1679 aa4.38□□□□□ -1.71
SHH3YMR118C KTR1P27810 393 aaKnown RBP4.37□□□□□ -1.71
SHH3YMR118C SCT1P32784 759 aa4.37□□□□□ -1.71
SHH3YMR118C MDJ1P35191 511 aa4.37□□□□□ -1.71
SHH3YMR118C MET10P39692 1035 aa4.37□□□□□ -1.71
SHH3YMR118C VPS27P40343 622 aaKnown RBP4.37□□□□□ -1.71
SHH3YMR118C KIP3P53086 805 aaKnown RBP4.37□□□□□ -1.71
SHH3YMR118C RAV1P47104 1357 aa4.37□□□□□ -1.71
SHH3YMR118C TY1B-JR2P47100 1755 aaKnown RBP4.36□□□□□ -1.71
SHH3YMR118C TY1B-ER2Q03619 1755 aa4.36□□□□□ -1.71
SHH3YMR118C TY1B-MR1Q04214 1755 aa4.36□□□□□ -1.71
SHH3YMR118C TY1B-MR2Q04670 1755 aaKnown RBP4.36□□□□□ -1.71
SHH3YMR118C TY1B-LR1Q12088 1755 aaKnown RBP4.36□□□□□ -1.71
SHH3YMR118C TY1B-NL1Q12112 1755 aa4.36□□□□□ -1.71
SHH3YMR118C TY1B-GR1Q12141 1755 aa4.36□□□□□ -1.71
SHH3YMR118C TY1B-BLQ12490 1755 aa4.36□□□□□ -1.71
SHH3YMR118C TAF5P38129 798 aa4.36□□□□□ -1.71
SHH3YMR118C OSH7P38755 437 aa4.36□□□□□ -1.71
SHH3YMR118C ROG3P43602 733 aa4.36□□□□□ -1.71
SHH3YMR118C RTC1Q08281 1341 aa4.36□□□□□ -1.71
SHH3YMR118C MKS1P34072 584 aa4.35□□□□□ -1.71
SHH3YMR118C FIG4P42837 879 aa4.35□□□□□ -1.71
SHH3YMR118C CSN12P47130 423 aa4.35□□□□□ -1.71
SHH3YMR118C DFG5Q05031 458 aa4.35□□□□□ -1.71
SHH3YMR118C RVB2Q12464 471 aaKnown RBP4.35□□□□□ -1.71
SHH3YMR118C YOR093CQ12275 1648 aa4.35□□□□□ -1.71
SHH3YMR118C RPO21P04050 1733 aaKnown RBP4.35□□□□□ -1.71
SHH3YMR118C MNN4P36044 1178 aa4.34□□□□□ -1.71
SHH3YMR118C ESL2P36168 1195 aa4.34□□□□□ -1.71
SHH3YMR118C LYS5P50113 272 aa4.34□□□□□ -1.71
SHH3YMR118C YRB30P53107 440 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms