RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeastyeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCO1YMR075W ARG8P18544 423 aa2.7□□□□□ -1.98
RCO1YMR075W UBP5P39944 805 aa2.7□□□□□ -1.98
RCO1YMR075W NUP42P49686 430 aaKnown RBP2.7□□□□□ -1.98
RCO1YMR075W WTM2Q12206 467 aa2.7□□□□□ -1.98
RCO1YMR075W KAE1P36132 386 aa2.69□□□□□ -1.98
RCO1YMR075W SSN3P39073 555 aa2.69□□□□□ -1.98
RCO1YMR075W MRPL16P38064 232 aa2.69□□□□□ -1.98
RCO1YMR075W ATF2P53296 535 aa2.69□□□□□ -1.98
RCO1YMR075W FRA1Q07825 749 aa2.69□□□□□ -1.98
RCO1YMR075W STB3Q12427 513 aa2.69□□□□□ -1.98
RCO1YMR075W YJU3P28321 313 aa2.67□□□□□ -1.98
RCO1YMR075W UTR2P32623 467 aa2.67□□□□□ -1.98
RCO1YMR075W YKL222CP35995 705 aa2.67□□□□□ -1.98
RCO1YMR075W PKH3Q03306 898 aaPredicted RBP2.67□□□□□ -1.98
RCO1YMR075W TY1A-DR2Q03964 440 aaKnown RBP2.67□□□□□ -1.98
RCO1YMR075W MCM16Q12262 181 aa2.67□□□□□ -1.98
RCO1YMR075W IRE1P32361 1115 aa2.67□□□□□ -1.98
RCO1YMR075W RSC30P38781 883 aa2.67□□□□□ -1.98
RCO1YMR075W BUD9P53226 547 aa2.67□□□□□ -1.98
RCO1YMR075W SAC7P17121 654 aa2.66□□□□□ -1.98
RCO1YMR075W PUB1P32588 453 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
RCO1YMR075W ALG14P38242 237 aa2.66□□□□□ -1.98
RCO1YMR075W TOS1P38288 455 aa2.66□□□□□ -1.98
RCO1YMR075W AI3P03877 415 aa2.65□□□□□ -1.98
RCO1YMR075W SPT2P06843 333 aaPredicted RBP2.65□□□□□ -1.98
RCO1YMR075W STE20Q03497 939 aaKnown RBP2.65□□□□□ -1.98
RCO1YMR075W TY1A-DR3Q12441 440 aa2.65□□□□□ -1.98
RCO1YMR075W JJJ2P46997 583 aa2.65□□□□□ -1.99
RCO1YMR075W ARI1P53111 347 aaKnown RBP2.65□□□□□ -1.99
RCO1YMR075W DIT2P21595 489 aa2.64□□□□□ -1.99
RCO1YMR075W PGM1P33401 570 aaKnown RBP2.64□□□□□ -1.99
RCO1YMR075W SFA1P32771 386 aa2.64□□□□□ -1.99
RCO1YMR075W YGR130CP53278 816 aa2.64□□□□□ -1.99
RCO1YMR075W SUM1P46676 1062 aa2.63□□□□□ -1.99
RCO1YMR075W MRX12P47084 519 aa2.63□□□□□ -1.99
RCO1YMR075W SPB4P25808 606 aaPredicted RBP2.62□□□□□ -1.99
RCO1YMR075W PGM2P37012 569 aaKnown RBP2.62□□□□□ -1.99
RCO1YMR075W YTA6P40328 754 aa2.62□□□□□ -1.99
RCO1YMR075W HEH2Q03281 663 aa2.62□□□□□ -1.99
RCO1YMR075W BRE4Q07660 1125 aa2.62□□□□□ -1.99
RCO1YMR075W RSC6P25632 483 aa2.62□□□□□ -1.99
RCO1YMR075W YKR073CP36153 106 aa2.62□□□□□ -1.99
RCO1YMR075W YPR084WQ06821 456 aa2.62□□□□□ -1.99
RCO1YMR075W UTP7P40055 554 aaKnown RBP2.61□□□□□ -1.99
RCO1YMR075W SPR3P41901 512 aa2.61□□□□□ -1.99
RCO1YMR075W YCR015CP25616 317 aa2.61□□□□□ -1.99
RCO1YMR075W PDC6P26263 563 aaKnown RBP2.61□□□□□ -1.99
RCO1YMR075W CHS2P14180 963 aa2.6□□□□□ -1.99
RCO1YMR075W NIT1P40447 199 aa2.6□□□□□ -1.99
RCO1YMR075W TRP3P00937 484 aa2.59□□□□□ -1.99
RCO1YMR075W PSH1Q12161 406 aa2.59□□□□□ -1.99
RCO1YMR075W YLR122CQ12312 125 aa2.59□□□□□ -1.99
RCO1YMR075W RRM3P38766 723 aa2.59□□□□□ -2
RCO1YMR075W ATG3P40344 310 aa2.59□□□□□ -2
RCO1YMR075W SAF1P38352 637 aa2.58□□□□□ -2
RCO1YMR075W ISR1Q06098 443 aaKnown RBP2.58□□□□□ -2
RCO1YMR075W LEU1P07264 779 aaKnown RBP2.57□□□□□ -2
RCO1YMR075W PRP43P53131 767 aaKnown RBP2.57□□□□□ -2
RCO1YMR075W ECL1P48235 211 aa2.56□□□□□ -2
RCO1YMR075W GIS4Q04233 774 aa2.56□□□□□ -2
RCO1YMR075W RAD59Q12223 238 aa2.56□□□□□ -2
RCO1YMR075W RGP1P16664 663 aa2.56□□□□□ -2
RCO1YMR075W CTH1P47976 325 aa2.56□□□□□ -2
RCO1YMR075W MAG2Q06436 670 aaKnown RBP2.56□□□□□ -2
RCO1YMR075W CYC7P00045 113 aa2.55□□□□□ -2
RCO1YMR075W MAK16P10962 306 aaPredicted RBP2.55□□□□□ -2
RCO1YMR075W RNQ1P25367 405 aa2.55□□□□□ -2
RCO1YMR075W SPO74P45819 413 aa2.55□□□□□ -2
RCO1YMR075W TFB3Q03290 321 aa2.55□□□□□ -2
RCO1YMR075W SHM1P37292 490 aaPredicted RBP2.54□□□□□ -2
RCO1YMR075W MSC7P38694 644 aa2.54□□□□□ -2
RCO1YMR075W ESC8Q08119 714 aa2.54□□□□□ -2
RCO1YMR075W SLP1Q12232 587 aa2.54□□□□□ -2
RCO1YMR075W NCL1P38205 684 aaKnown RBP2.54□□□□□ -2
RCO1YMR075W CSN12P47130 423 aa2.54□□□□□ -2
RCO1YMR075W NAR1P23503 491 aaKnown RBP2.53□□□□□ -2
RCO1YMR075W SLX8P40072 274 aa2.53□□□□□ -2.01
RCO1YMR075W GAS5Q08193 484 aa2.53□□□□□ -2.01
RCO1YMR075W PRK1P40494 810 aa2.52□□□□□ -2.01
RCO1YMR075W MSB1P21339 1137 aaKnown RBP2.51□□□□□ -2.01
RCO1YMR075W GSF2Q04697 403 aaKnown RBP2.51□□□□□ -2.01
RCO1YMR075W NSI1Q12457 570 aa2.51□□□□□ -2.01
RCO1YMR075W GIP4P39732 760 aa2.51□□□□□ -2.01
RCO1YMR075W UTP13Q05946 817 aaKnown RBP2.51□□□□□ -2.01
RCO1YMR075W YNR021WP53723 404 aaKnown RBP2.5□□□□□ -2.01
RCO1YMR075W HPC2Q01448 625 aa2.5□□□□□ -2.01
RCO1YMR075W AKR1P39010 764 aa2.49□□□□□ -2.01
RCO1YMR075W SSA2P10592 639 aaKnown RBP2.49□□□□□ -2.01
RCO1YMR075W SPT5P27692 1063 aaKnown RBP2.49□□□□□ -2.01
RCO1YMR075W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
RCO1YMR075W MCM1P11746 286 aa2.48□□□□□ -2.01
RCO1YMR075W KTR1P27810 393 aaKnown RBP2.48□□□□□ -2.01
RCO1YMR075W SEG2P34250 1132 aa2.48□□□□□ -2.01
RCO1YMR075W POL12P38121 705 aaPredicted RBP2.48□□□□□ -2.01
RCO1YMR075W EMP47P43555 445 aa2.48□□□□□ -2.01
RCO1YMR075W DSE4P53753 1117 aa2.48□□□□□ -2.01
RCO1YMR075W RPS31P05759 152 aaKnown RBP2.48□□□□□ -2.01
RCO1YMR075W TAD3Q9URQ3 322 aa2.48□□□□□ -2.01
RCO1YMR075W NGR1P32831 672 aaKnown RBP2.47□□□□□ -2.01
RCO1YMR075W YFL034WP43564 1073 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms