RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C AHP1P38013 176 aaKnown RBP5.87□□□□□ -1.47
UBX4YMR067C SSN3P39073 555 aa5.87□□□□□ -1.47
UBX4YMR067C UBP15P50101 1230 aa5.87□□□□□ -1.47
UBX4YMR067C YPR204WQ08995 1032 aa5.87□□□□□ -1.47
UBX4YMR067C YGR035CP53222 116 aa5.86□□□□□ -1.47
UBX4YMR067C UTP7P40055 554 aaKnown RBP5.85□□□□□ -1.47
UBX4YMR067C TSC13Q99190 310 aa5.85□□□□□ -1.47
UBX4YMR067C CCP1P00431 361 aa5.84□□□□□ -1.47
UBX4YMR067C SWI5P08153 709 aa5.84□□□□□ -1.47
UBX4YMR067C SLA1P32790 1244 aa5.84□□□□□ -1.47
UBX4YMR067C JJJ2P46997 583 aa5.83□□□□□ -1.48
UBX4YMR067C LYS5P50113 272 aa5.83□□□□□ -1.48
UBX4YMR067C NAM8Q00539 523 aaKnown RBP5.83□□□□□ -1.48
UBX4YMR067C HPF1Q05164 967 aa5.83□□□□□ -1.48
UBX4YMR067C YPQ2Q06328 317 aa5.83□□□□□ -1.48
UBX4YMR067C DPH6Q12429 685 aa5.83□□□□□ -1.48
UBX4YMR067C RPS6AP0CX37 236 aaKnown RBP5.82□□□□□ -1.48
UBX4YMR067C RPS6BP0CX38 236 aaPredicted RBP5.82□□□□□ -1.48
UBX4YMR067C MCM1P11746 286 aa5.82□□□□□ -1.48
UBX4YMR067C ALA1P40825 983 aaKnown RBP5.82□□□□□ -1.48
UBX4YMR067C TY1A-DR3Q12441 440 aa5.82□□□□□ -1.48
UBX4YMR067C HAP4P14064 554 aa5.81□□□□□ -1.48
UBX4YMR067C PHO87P25360 923 aa5.81□□□□□ -1.48
UBX4YMR067C GAS4Q08271 471 aa5.81□□□□□ -1.48
UBX4YMR067C TRK2P28584 889 aa5.8□□□□□ -1.48
UBX4YMR067C NTH2P35172 780 aa5.8□□□□□ -1.48
UBX4YMR067C JJJ3P47138 172 aa5.8□□□□□ -1.48
UBX4YMR067C PDI1P17967 522 aaKnown RBP5.79□□□□□ -1.48
UBX4YMR067C UBP1P25037 809 aa5.79□□□□□ -1.48
UBX4YMR067C IRE1P32361 1115 aa5.79□□□□□ -1.48
UBX4YMR067C TTI1P36097 1038 aa5.79□□□□□ -1.48
UBX4YMR067C CUZ1P53899 274 aa5.79□□□□□ -1.48
UBX4YMR067C CYT1P07143 309 aa5.78□□□□□ -1.48
UBX4YMR067C DIT1P21623 536 aa5.78□□□□□ -1.48
UBX4YMR067C ACS2P52910 683 aaKnown RBP5.78□□□□□ -1.48
UBX4YMR067C GAL2P13181 574 aa5.77□□□□□ -1.49
UBX4YMR067C SHM1P37292 490 aaPredicted RBP5.77□□□□□ -1.49
UBX4YMR067C CEM1P39525 442 aa5.77□□□□□ -1.49
UBX4YMR067C KTR7P40504 517 aa5.77□□□□□ -1.49
UBX4YMR067C YDR461C-AQ2V2P7 80 aa5.77□□□□□ -1.49
UBX4YMR067C TGL4P36165 910 aa5.76□□□□□ -1.49
UBX4YMR067C YMR265CQ03508 461 aaKnown RBP5.76□□□□□ -1.49
UBX4YMR067C RPP1AP05318 106 aaPredicted RBP5.75□□□□□ -1.49
UBX4YMR067C PDC6P26263 563 aaKnown RBP5.75□□□□□ -1.49
UBX4YMR067C PSH1Q12161 406 aa5.75□□□□□ -1.49
UBX4YMR067C YTA6P40328 754 aa5.74□□□□□ -1.49
UBX4YMR067C UTP4Q06679 776 aaKnown RBP5.74□□□□□ -1.49
UBX4YMR067C SYT1Q06836 1226 aa5.74□□□□□ -1.49
UBX4YMR067C RPS31P05759 152 aaKnown RBP5.73□□□□□ -1.49
UBX4YMR067C ROM1P53046 1155 aa5.73□□□□□ -1.49
UBX4YMR067C KRE33P53914 1056 aaKnown RBP5.73□□□□□ -1.49
UBX4YMR067C LEU1P07264 779 aaKnown RBP5.72□□□□□ -1.49
UBX4YMR067C SCD5P34758 872 aa5.72□□□□□ -1.49
UBX4YMR067C VAN1P23642 535 aa5.71□□□□□ -1.5
UBX4YMR067C NGR1P32831 672 aaKnown RBP5.71□□□□□ -1.5
UBX4YMR067C TRS33Q99394 268 aa5.71□□□□□ -1.5
UBX4YMR067C SSA4P22202 642 aaKnown RBP5.7□□□□□ -1.5
UBX4YMR067C CPS1P27614 576 aa5.7□□□□□ -1.5
UBX4YMR067C YNL165WP53891 406 aa5.7□□□□□ -1.5
UBX4YMR067C ADE12P80210 433 aaKnown RBP5.7□□□□□ -1.5
UBX4YMR067C FPS1P23900 669 aa5.69□□□□□ -1.5
UBX4YMR067C MLF3P32047 452 aa5.69□□□□□ -1.5
UBX4YMR067C MRPL16P38064 232 aa5.69□□□□□ -1.5
UBX4YMR067C ALD2P47771 506 aa5.69□□□□□ -1.5
UBX4YMR067C CWH41P53008 833 aa5.69□□□□□ -1.5
UBX4YMR067C ECM23Q02710 187 aa5.69□□□□□ -1.5
UBX4YMR067C STB3Q12427 513 aa5.69□□□□□ -1.5
UBX4YMR067C RLF2Q12495 606 aa5.69□□□□□ -1.5
UBX4YMR067C PUP1P25043 261 aa5.68□□□□□ -1.5
UBX4YMR067C AI1P03875 834 aa5.67□□□□□ -1.5
UBX4YMR067C HXT5P38695 592 aa5.67□□□□□ -1.5
UBX4YMR067C SPR3P41901 512 aa5.67□□□□□ -1.5
UBX4YMR067C Q0182Q9ZZW1 134 aa5.67□□□□□ -1.5
UBX4YMR067C RGP1P16664 663 aa5.66□□□□□ -1.5
UBX4YMR067C UBX7P38349 436 aa5.66□□□□□ -1.5
UBX4YMR067C PUF6Q04373 656 aaKnown RBP5.66□□□□□ -1.5
UBX4YMR067C PHM7Q12252 991 aa5.66□□□□□ -1.5
UBX4YMR067C ICP55P40051 511 aa5.64□□□□□ -1.51
UBX4YMR067C SKP1P52286 194 aa5.64□□□□□ -1.51
UBX4YMR067C GPM1P00950 247 aaKnown RBP5.63□□□□□ -1.51
UBX4YMR067C CAB1Q04430 367 aa5.63□□□□□ -1.51
UBX4YMR067C KNS1P32350 737 aaPredicted RBP5.62□□□□□ -1.51
UBX4YMR067C KAP122P32767 1081 aa5.62□□□□□ -1.51
UBX4YMR067C MTO1P53070 669 aa5.62□□□□□ -1.51
UBX4YMR067C NSG2P53898 299 aa5.62□□□□□ -1.51
UBX4YMR067C HEH2Q03281 663 aa5.62□□□□□ -1.51
UBX4YMR067C PUS1Q12211 544 aaKnown RBP5.62□□□□□ -1.51
UBX4YMR067C SUV3P32580 737 aa5.61□□□□□ -1.51
UBX4YMR067C MTC5Q03897 1148 aa5.61□□□□□ -1.51
UBX4YMR067C TY1A-DR2Q03964 440 aaKnown RBP5.61□□□□□ -1.51
UBX4YMR067C SRS2P12954 1174 aa5.6□□□□□ -1.51
UBX4YMR067C RPC31P17890 251 aa5.6□□□□□ -1.51
UBX4YMR067C NCL1P38205 684 aaKnown RBP5.6□□□□□ -1.51
UBX4YMR067C MSC7P38694 644 aa5.6□□□□□ -1.51
UBX4YMR067C YFL066CP43538 392 aa5.6□□□□□ -1.51
UBX4YMR067C NOB1Q08444 459 aaKnown RBP5.6□□□□□ -1.51
UBX4YMR067C PDC5P16467 563 aaKnown RBP5.59□□□□□ -1.51
UBX4YMR067C MRPL33P20084 86 aa5.59□□□□□ -1.51
UBX4YMR067C ALD4P46367 519 aaKnown RBP5.59□□□□□ -1.51
UBX4YMR067C CUS1Q02554 436 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms