RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C RIM21P48565 533 aa6.76□□□□□ -1.33
RPN13YLR421C CEM1P39525 442 aa6.75□□□□□ -1.33
RPN13YLR421C SUM1P46676 1062 aa6.75□□□□□ -1.33
RPN13YLR421C YMR265CQ03508 461 aaKnown RBP6.75□□□□□ -1.33
RPN13YLR421C MDJ1P35191 511 aa6.74□□□□□ -1.33
RPN13YLR421C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
RPN13YLR421C RDS2P19541 446 aaKnown RBP6.73□□□□□ -1.33
RPN13YLR421C DIT1P21623 536 aa6.72□□□□□ -1.33
RPN13YLR421C BIM1P40013 344 aa6.72□□□□□ -1.33
RPN13YLR421C ICP55P40051 511 aa6.72□□□□□ -1.33
RPN13YLR421C ATG32P40458 529 aa6.71□□□□□ -1.34
RPN13YLR421C JJJ2P46997 583 aa6.71□□□□□ -1.34
RPN13YLR421C KRE33P53914 1056 aaKnown RBP6.71□□□□□ -1.34
RPN13YLR421C SHM1P37292 490 aaPredicted RBP6.7□□□□□ -1.34
RPN13YLR421C ADE12P80210 433 aaKnown RBP6.7□□□□□ -1.34
RPN13YLR421C IRE1P32361 1115 aa6.69□□□□□ -1.34
RPN13YLR421C NSG2P53898 299 aa6.69□□□□□ -1.34
RPN13YLR421C SYT1Q06836 1226 aa6.69□□□□□ -1.34
RPN13YLR421C PUS1Q12211 544 aaKnown RBP6.69□□□□□ -1.34
RPN13YLR421C ENO1P00924 437 aaKnown RBP6.68□□□□□ -1.34
RPN13YLR421C SWI5P08153 709 aa6.68□□□□□ -1.34
RPN13YLR421C TIF1P10081 395 aaKnown RBP6.68□□□□□ -1.34
RPN13YLR421C AIM9P40053 627 aaKnown RBP6.68□□□□□ -1.34
RPN13YLR421C THI72Q08579 599 aa6.68□□□□□ -1.34
RPN13YLR421C RTG2P32608 588 aaKnown RBP6.67□□□□□ -1.34
RPN13YLR421C MRX10Q05648 414 aa6.67□□□□□ -1.34
RPN13YLR421C PHM7Q12252 991 aa6.67□□□□□ -1.34
RPN13YLR421C AI1P03875 834 aa6.66□□□□□ -1.34
RPN13YLR421C RPL34BP40525 121 aaKnown RBP6.66□□□□□ -1.34
RPN13YLR421C YDR461C-AQ2V2P7 80 aa6.66□□□□□ -1.34
RPN13YLR421C HGH1P48362 394 aaKnown RBP6.65□□□□□ -1.34
RPN13YLR421C YFL066CP43538 392 aa6.64□□□□□ -1.35
RPN13YLR421C YPQ2Q06328 317 aa6.64□□□□□ -1.35
RPN13YLR421C PSH1Q12161 406 aa6.64□□□□□ -1.35
RPN13YLR421C RPS6AP0CX37 236 aaKnown RBP6.63□□□□□ -1.35
RPN13YLR421C RPS6BP0CX38 236 aaPredicted RBP6.63□□□□□ -1.35
RPN13YLR421C PDC6P26263 563 aaKnown RBP6.63□□□□□ -1.35
RPN13YLR421C LSB3P43603 459 aaKnown RBP6.63□□□□□ -1.35
RPN13YLR421C RPS31P05759 152 aaKnown RBP6.62□□□□□ -1.35
RPN13YLR421C PDI1P17967 522 aaKnown RBP6.62□□□□□ -1.35
RPN13YLR421C NTH2P35172 780 aa6.62□□□□□ -1.35
RPN13YLR421C MRPL16P38064 232 aa6.62□□□□□ -1.35
RPN13YLR421C YFL034WP43564 1073 aa6.62□□□□□ -1.35
RPN13YLR421C SBE2P42223 864 aaKnown RBP6.61□□□□□ -1.35
RPN13YLR421C STB3Q12427 513 aa6.61□□□□□ -1.35
RPN13YLR421C FPS1P23900 669 aa6.6□□□□□ -1.35
RPN13YLR421C KTR7P40504 517 aa6.59□□□□□ -1.35
RPN13YLR421C YNL165WP53891 406 aa6.59□□□□□ -1.35
RPN13YLR421C TSC13Q99190 310 aa6.59□□□□□ -1.35
RPN13YLR421C PEP12P32854 288 aa6.58□□□□□ -1.36
RPN13YLR421C TDA6Q06466 467 aa6.56□□□□□ -1.36
RPN13YLR421C GPM1P00950 247 aaKnown RBP6.55□□□□□ -1.36
RPN13YLR421C MCM1P11746 286 aa6.55□□□□□ -1.36
RPN13YLR421C SPR3P41901 512 aa6.55□□□□□ -1.36
RPN13YLR421C YPR053CQ6Q5F3 151 aa6.55□□□□□ -1.36
RPN13YLR421C CYT1P07143 309 aa6.54□□□□□ -1.36
RPN13YLR421C LEU1P07264 779 aaKnown RBP6.54□□□□□ -1.36
RPN13YLR421C ALD2P47771 506 aa6.54□□□□□ -1.36
RPN13YLR421C YNR014WP53719 212 aa6.54□□□□□ -1.36
RPN13YLR421C MLF3P32047 452 aa6.53□□□□□ -1.36
RPN13YLR421C YTA6P40328 754 aa6.53□□□□□ -1.36
RPN13YLR421C ACS2P52910 683 aaKnown RBP6.53□□□□□ -1.36
RPN13YLR421C Q0182Q9ZZW1 134 aa6.53□□□□□ -1.36
RPN13YLR421C LEO1P38439 464 aa6.52□□□□□ -1.37
RPN13YLR421C PHO87P25360 923 aa6.51□□□□□ -1.37
RPN13YLR421C CCT8P47079 568 aaKnown RBP6.51□□□□□ -1.37
RPN13YLR421C TY1A-DR2Q03964 440 aaKnown RBP6.51□□□□□ -1.37
RPN13YLR421C RGP1P16664 663 aa6.5□□□□□ -1.37
RPN13YLR421C YMR187CQ03236 431 aa6.5□□□□□ -1.37
RPN13YLR421C PDC5P16467 563 aaKnown RBP6.49□□□□□ -1.37
RPN13YLR421C BOI2P39969 1040 aa6.49□□□□□ -1.37
RPN13YLR421C HAP4P14064 554 aa6.48□□□□□ -1.37
RPN13YLR421C KNS1P32350 737 aaPredicted RBP6.47□□□□□ -1.37
RPN13YLR421C MCX1P38323 520 aaPredicted RBP6.47□□□□□ -1.37
RPN13YLR421C MSC7P38694 644 aa6.47□□□□□ -1.37
RPN13YLR421C SKN7P38889 622 aa6.47□□□□□ -1.37
RPN13YLR421C MTO1P53070 669 aa6.47□□□□□ -1.37
RPN13YLR421C GAS4Q08271 471 aa6.46□□□□□ -1.38
RPN13YLR421C GAL2P13181 574 aa6.45□□□□□ -1.38
RPN13YLR421C SIS2P36024 562 aa6.45□□□□□ -1.38
RPN13YLR421C ROM1P53046 1155 aa6.45□□□□□ -1.38
RPN13YLR421C DMA2P53924 522 aa6.45□□□□□ -1.38
RPN13YLR421C RPP1AP05318 106 aaPredicted RBP6.44□□□□□ -1.38
RPN13YLR421C YCK2P23292 546 aaKnown RBP6.44□□□□□ -1.38
RPN13YLR421C UBP1P25037 809 aa6.44□□□□□ -1.38
RPN13YLR421C MET1P36150 593 aa6.44□□□□□ -1.38
RPN13YLR421C NGR1P32831 672 aaKnown RBP6.42□□□□□ -1.38
RPN13YLR421C HXT5P38695 592 aa6.42□□□□□ -1.38
RPN13YLR421C SLN1P39928 1220 aaPredicted RBP6.42□□□□□ -1.38
RPN13YLR421C YDR215CQ12240 137 aa6.42□□□□□ -1.38
RPN13YLR421C SCD5P34758 872 aa6.41□□□□□ -1.38
RPN13YLR421C TTI1P36097 1038 aa6.41□□□□□ -1.38
RPN13YLR421C TGL4P36165 910 aa6.41□□□□□ -1.38
RPN13YLR421C ECM23Q02710 187 aa6.41□□□□□ -1.38
RPN13YLR421C UTP4Q06679 776 aaKnown RBP6.41□□□□□ -1.38
RPN13YLR421C CUS1Q02554 436 aaPredicted RBP6.4□□□□□ -1.38
RPN13YLR421C SBP1P10080 294 aaKnown RBP6.39□□□□□ -1.39
RPN13YLR421C VAN1P23642 535 aa6.39□□□□□ -1.39
RPN13YLR421C KAP122P32767 1081 aa6.39□□□□□ -1.39
RPN13YLR421C NCL1P38205 684 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms