RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C RIM21P48565 533 aa6.76□□□□□ -1.33
RPN13YLR421C CEM1P39525 442 aa6.75□□□□□ -1.33
RPN13YLR421C SUM1P46676 1062 aa6.75□□□□□ -1.33
RPN13YLR421C YMR265CQ03508 461 aaKnown RBP6.75□□□□□ -1.33
RPN13YLR421C MDJ1P35191 511 aa6.74□□□□□ -1.33
RPN13YLR421C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
RPN13YLR421C RDS2P19541 446 aaKnown RBP6.73□□□□□ -1.33
RPN13YLR421C DIT1P21623 536 aa6.72□□□□□ -1.33
RPN13YLR421C BIM1P40013 344 aa6.72□□□□□ -1.33
RPN13YLR421C ICP55P40051 511 aa6.72□□□□□ -1.33
RPN13YLR421C ATG32P40458 529 aa6.71□□□□□ -1.34
RPN13YLR421C JJJ2P46997 583 aa6.71□□□□□ -1.34
RPN13YLR421C KRE33P53914 1056 aaKnown RBP6.71□□□□□ -1.34
RPN13YLR421C SHM1P37292 490 aaPredicted RBP6.7□□□□□ -1.34
RPN13YLR421C ADE12P80210 433 aaKnown RBP6.7□□□□□ -1.34
RPN13YLR421C IRE1P32361 1115 aa6.69□□□□□ -1.34
RPN13YLR421C NSG2P53898 299 aa6.69□□□□□ -1.34
RPN13YLR421C SYT1Q06836 1226 aa6.69□□□□□ -1.34
RPN13YLR421C PUS1Q12211 544 aaKnown RBP6.69□□□□□ -1.34
RPN13YLR421C ENO1P00924 437 aaKnown RBP6.68□□□□□ -1.34
RPN13YLR421C SWI5P08153 709 aa6.68□□□□□ -1.34
RPN13YLR421C TIF1P10081 395 aaKnown RBP6.68□□□□□ -1.34
RPN13YLR421C AIM9P40053 627 aaKnown RBP6.68□□□□□ -1.34
RPN13YLR421C THI72Q08579 599 aa6.68□□□□□ -1.34
RPN13YLR421C RTG2P32608 588 aaKnown RBP6.67□□□□□ -1.34
RPN13YLR421C MRX10Q05648 414 aa6.67□□□□□ -1.34
RPN13YLR421C PHM7Q12252 991 aa6.67□□□□□ -1.34
RPN13YLR421C AI1P03875 834 aa6.66□□□□□ -1.34
RPN13YLR421C RPL34BP40525 121 aaKnown RBP6.66□□□□□ -1.34
RPN13YLR421C YDR461C-AQ2V2P7 80 aa6.66□□□□□ -1.34
RPN13YLR421C HGH1P48362 394 aaKnown RBP6.65□□□□□ -1.34
RPN13YLR421C YFL066CP43538 392 aa6.64□□□□□ -1.35
RPN13YLR421C YPQ2Q06328 317 aa6.64□□□□□ -1.35
RPN13YLR421C PSH1Q12161 406 aa6.64□□□□□ -1.35
RPN13YLR421C RPS6AP0CX37 236 aaKnown RBP6.63□□□□□ -1.35
RPN13YLR421C RPS6BP0CX38 236 aaPredicted RBP6.63□□□□□ -1.35
RPN13YLR421C PDC6P26263 563 aaKnown RBP6.63□□□□□ -1.35
RPN13YLR421C LSB3P43603 459 aaKnown RBP6.63□□□□□ -1.35
RPN13YLR421C RPS31P05759 152 aaKnown RBP6.62□□□□□ -1.35
RPN13YLR421C PDI1P17967 522 aaKnown RBP6.62□□□□□ -1.35
RPN13YLR421C NTH2P35172 780 aa6.62□□□□□ -1.35
RPN13YLR421C MRPL16P38064 232 aa6.62□□□□□ -1.35
RPN13YLR421C YFL034WP43564 1073 aa6.62□□□□□ -1.35
RPN13YLR421C SBE2P42223 864 aaKnown RBP6.61□□□□□ -1.35
RPN13YLR421C STB3Q12427 513 aa6.61□□□□□ -1.35
RPN13YLR421C FPS1P23900 669 aa6.6□□□□□ -1.35
RPN13YLR421C KTR7P40504 517 aa6.59□□□□□ -1.35
RPN13YLR421C YNL165WP53891 406 aa6.59□□□□□ -1.35
RPN13YLR421C TSC13Q99190 310 aa6.59□□□□□ -1.35
RPN13YLR421C PEP12P32854 288 aa6.58□□□□□ -1.36
RPN13YLR421C TDA6Q06466 467 aa6.56□□□□□ -1.36
RPN13YLR421C GPM1P00950 247 aaKnown RBP6.55□□□□□ -1.36
RPN13YLR421C MCM1P11746 286 aa6.55□□□□□ -1.36
RPN13YLR421C SPR3P41901 512 aa6.55□□□□□ -1.36
RPN13YLR421C YPR053CQ6Q5F3 151 aa6.55□□□□□ -1.36
RPN13YLR421C CYT1P07143 309 aa6.54□□□□□ -1.36
RPN13YLR421C LEU1P07264 779 aaKnown RBP6.54□□□□□ -1.36
RPN13YLR421C ALD2P47771 506 aa6.54□□□□□ -1.36
RPN13YLR421C YNR014WP53719 212 aa6.54□□□□□ -1.36
RPN13YLR421C MLF3P32047 452 aa6.53□□□□□ -1.36
RPN13YLR421C YTA6P40328 754 aa6.53□□□□□ -1.36
RPN13YLR421C ACS2P52910 683 aaKnown RBP6.53□□□□□ -1.36
RPN13YLR421C Q0182Q9ZZW1 134 aa6.53□□□□□ -1.36
RPN13YLR421C LEO1P38439 464 aa6.52□□□□□ -1.37
RPN13YLR421C PHO87P25360 923 aa6.51□□□□□ -1.37
RPN13YLR421C CCT8P47079 568 aaKnown RBP6.51□□□□□ -1.37
RPN13YLR421C TY1A-DR2Q03964 440 aaKnown RBP6.51□□□□□ -1.37
RPN13YLR421C RGP1P16664 663 aa6.5□□□□□ -1.37
RPN13YLR421C YMR187CQ03236 431 aa6.5□□□□□ -1.37
RPN13YLR421C PDC5P16467 563 aaKnown RBP6.49□□□□□ -1.37
RPN13YLR421C BOI2P39969 1040 aa6.49□□□□□ -1.37
RPN13YLR421C HAP4P14064 554 aa6.48□□□□□ -1.37
RPN13YLR421C KNS1P32350 737 aaPredicted RBP6.47□□□□□ -1.37
RPN13YLR421C MCX1P38323 520 aaPredicted RBP6.47□□□□□ -1.37
RPN13YLR421C MSC7P38694 644 aa6.47□□□□□ -1.37
RPN13YLR421C SKN7P38889 622 aa6.47□□□□□ -1.37
RPN13YLR421C MTO1P53070 669 aa6.47□□□□□ -1.37
RPN13YLR421C GAS4Q08271 471 aa6.46□□□□□ -1.38
RPN13YLR421C GAL2P13181 574 aa6.45□□□□□ -1.38
RPN13YLR421C SIS2P36024 562 aa6.45□□□□□ -1.38
RPN13YLR421C ROM1P53046 1155 aa6.45□□□□□ -1.38
RPN13YLR421C DMA2P53924 522 aa6.45□□□□□ -1.38
RPN13YLR421C RPP1AP05318 106 aaPredicted RBP6.44□□□□□ -1.38
RPN13YLR421C YCK2P23292 546 aaKnown RBP6.44□□□□□ -1.38
RPN13YLR421C UBP1P25037 809 aa6.44□□□□□ -1.38
RPN13YLR421C MET1P36150 593 aa6.44□□□□□ -1.38
RPN13YLR421C NGR1P32831 672 aaKnown RBP6.42□□□□□ -1.38
RPN13YLR421C HXT5P38695 592 aa6.42□□□□□ -1.38
RPN13YLR421C SLN1P39928 1220 aaPredicted RBP6.42□□□□□ -1.38
RPN13YLR421C YDR215CQ12240 137 aa6.42□□□□□ -1.38
RPN13YLR421C SCD5P34758 872 aa6.41□□□□□ -1.38
RPN13YLR421C TTI1P36097 1038 aa6.41□□□□□ -1.38
RPN13YLR421C TGL4P36165 910 aa6.41□□□□□ -1.38
RPN13YLR421C ECM23Q02710 187 aa6.41□□□□□ -1.38
RPN13YLR421C UTP4Q06679 776 aaKnown RBP6.41□□□□□ -1.38
RPN13YLR421C CUS1Q02554 436 aaPredicted RBP6.4□□□□□ -1.38
RPN13YLR421C SBP1P10080 294 aaKnown RBP6.39□□□□□ -1.39
RPN13YLR421C VAN1P23642 535 aa6.39□□□□□ -1.39
RPN13YLR421C KAP122P32767 1081 aa6.39□□□□□ -1.39
RPN13YLR421C NCL1P38205 684 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 7 ms