RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C GUT2P32191 649 aa5.91□□□□□ -1.46
SDO1YLR022C ATG20Q07528 640 aa5.91□□□□□ -1.46
SDO1YLR022C AI1P03875 834 aa5.9□□□□□ -1.46
SDO1YLR022C STE6P12866 1290 aa5.9□□□□□ -1.46
SDO1YLR022C SIN3P22579 1536 aa5.89□□□□□ -1.47
SDO1YLR022C NAM8Q00539 523 aaKnown RBP5.89□□□□□ -1.47
SDO1YLR022C SBP1P10080 294 aaKnown RBP5.88□□□□□ -1.47
SDO1YLR022C CSE4P36012 229 aa5.88□□□□□ -1.47
SDO1YLR022C BRL1P38770 471 aa5.88□□□□□ -1.47
SDO1YLR022C NAF1P53919 492 aaKnown RBP5.88□□□□□ -1.47
SDO1YLR022C ISU1Q03020 165 aa5.88□□□□□ -1.47
SDO1YLR022C TFB3Q03290 321 aa5.88□□□□□ -1.47
SDO1YLR022C PAN1P32521 1480 aa5.88□□□□□ -1.47
SDO1YLR022C CDC19P00549 500 aaKnown RBP5.87□□□□□ -1.47
SDO1YLR022C ISF1P32488 338 aa5.87□□□□□ -1.47
SDO1YLR022C STE20Q03497 939 aaKnown RBP5.87□□□□□ -1.47
SDO1YLR022C DNF2Q12675 1612 aa5.87□□□□□ -1.47
SDO1YLR022C FRA1Q07825 749 aa5.86□□□□□ -1.47
SDO1YLR022C YPR053CQ6Q5F3 151 aa5.86□□□□□ -1.47
SDO1YLR022C SCC2Q04002 1493 aa5.85□□□□□ -1.47
SDO1YLR022C ESP1Q03018 1630 aa5.85□□□□□ -1.47
SDO1YLR022C YPK9Q12697 1472 aa5.84□□□□□ -1.47
SDO1YLR022C DLD3P39976 496 aaKnown RBP5.84□□□□□ -1.47
SDO1YLR022C SPT5P27692 1063 aaKnown RBP5.83□□□□□ -1.48
SDO1YLR022C YBL036CP38197 257 aa5.83□□□□□ -1.48
SDO1YLR022C EMP47P43555 445 aa5.83□□□□□ -1.48
SDO1YLR022C YOR093CQ12275 1648 aa5.83□□□□□ -1.48
SDO1YLR022C PKC1P24583 1151 aa5.82□□□□□ -1.48
SDO1YLR022C CUZ1P53899 274 aa5.82□□□□□ -1.48
SDO1YLR022C ISR1Q06098 443 aaKnown RBP5.82□□□□□ -1.48
SDO1YLR022C YDJ1P25491 409 aaKnown RBP5.81□□□□□ -1.48
SDO1YLR022C SKN7P38889 622 aa5.81□□□□□ -1.48
SDO1YLR022C VTC4P47075 721 aa5.81□□□□□ -1.48
SDO1YLR022C TY1B-BRQ12193 1756 aa5.8□□□□□ -1.48
SDO1YLR022C TY1B-GR3Q12316 1755 aa5.8□□□□□ -1.48
SDO1YLR022C TY1B-ORQ92393 1755 aa5.8□□□□□ -1.48
SDO1YLR022C VPS15P22219 1454 aa5.8□□□□□ -1.48
SDO1YLR022C DAL1P32375 460 aa5.8□□□□□ -1.48
SDO1YLR022C MCM16Q12262 181 aa5.8□□□□□ -1.48
SDO1YLR022C DAT1P13483 248 aaKnown RBP5.79□□□□□ -1.48
SDO1YLR022C WTM2Q12206 467 aa5.79□□□□□ -1.48
SDO1YLR022C TRM732Q03496 1420 aa5.79□□□□□ -1.48
SDO1YLR022C BIO2P32451 375 aa5.78□□□□□ -1.48
SDO1YLR022C UTP7P40055 554 aaKnown RBP5.78□□□□□ -1.48
SDO1YLR022C RPP2BP02400 110 aaKnown RBP5.77□□□□□ -1.49
SDO1YLR022C UTR2P32623 467 aa5.77□□□□□ -1.49
SDO1YLR022C HAL5P38970 855 aaKnown RBP5.77□□□□□ -1.49
SDO1YLR022C CEM1P39525 442 aa5.77□□□□□ -1.49
SDO1YLR022C MRX12P47084 519 aa5.77□□□□□ -1.49
SDO1YLR022C HGH1P48362 394 aaKnown RBP5.77□□□□□ -1.49
SDO1YLR022C TY1A-DR3Q12441 440 aa5.77□□□□□ -1.49
SDO1YLR022C SSN3P39073 555 aa5.76□□□□□ -1.49
SDO1YLR022C TY2B-LR1P0C2J3 1770 aa5.75□□□□□ -1.49
SDO1YLR022C TY2B-FP0CX63 1770 aa5.75□□□□□ -1.49
SDO1YLR022C TY2B-GR2P0CX64 1770 aa5.75□□□□□ -1.49
SDO1YLR022C TY2B-CP25384 1770 aa5.75□□□□□ -1.49
SDO1YLR022C TY2B-DR2Q03494 1770 aa5.75□□□□□ -1.49
SDO1YLR022C TY1B-DR1Q03855 1755 aa5.75□□□□□ -1.49
SDO1YLR022C TY2B-DR3Q07791 1770 aaKnown RBP5.75□□□□□ -1.49
SDO1YLR022C TY2B-OR1Q12113 1770 aa5.75□□□□□ -1.49
SDO1YLR022C TY2B-DR1Q12472 1770 aa5.75□□□□□ -1.49
SDO1YLR022C TY2B-OR2Q12501 1770 aa5.75□□□□□ -1.49
SDO1YLR022C APL6P46682 809 aa5.75□□□□□ -1.49
SDO1YLR022C SUP45P12385 437 aaKnown RBP5.74□□□□□ -1.49
SDO1YLR022C SLA1P32790 1244 aa5.74□□□□□ -1.49
SDO1YLR022C UBP15P50101 1230 aa5.74□□□□□ -1.49
SDO1YLR022C YMR265CQ03508 461 aaKnown RBP5.74□□□□□ -1.49
SDO1YLR022C NUP159P40477 1460 aa5.74□□□□□ -1.49
SDO1YLR022C YRF1-1P0CX20 1796 aa5.74□□□□□ -1.49
SDO1YLR022C YRF1-5P0CX21 1796 aa5.74□□□□□ -1.49
SDO1YLR022C YRF1-8P0CX22 1796 aa5.74□□□□□ -1.49
SDO1YLR022C YMR187CQ03236 431 aa5.73□□□□□ -1.49
SDO1YLR022C MMS22Q06164 1454 aa5.72□□□□□ -1.49
SDO1YLR022C SPT2P06843 333 aaPredicted RBP5.72□□□□□ -1.49
SDO1YLR022C AHP1P38013 176 aaKnown RBP5.72□□□□□ -1.49
SDO1YLR022C SOH1P38633 127 aa5.72□□□□□ -1.49
SDO1YLR022C YPP1P46951 817 aa5.72□□□□□ -1.49
SDO1YLR022C MSN5P52918 1224 aa5.72□□□□□ -1.49
SDO1YLR022C KRE33P53914 1056 aaKnown RBP5.72□□□□□ -1.49
SDO1YLR022C TDA6Q06466 467 aa5.72□□□□□ -1.49
SDO1YLR022C ENO2P00925 437 aaKnown RBP5.71□□□□□ -1.5
SDO1YLR022C DIT1P21623 536 aa5.71□□□□□ -1.5
SDO1YLR022C TBS1P38114 1094 aa5.71□□□□□ -1.5
SDO1YLR022C ALA1P40825 983 aaKnown RBP5.71□□□□□ -1.5
SDO1YLR022C ADE12P80210 433 aaKnown RBP5.71□□□□□ -1.5
SDO1YLR022C YJL007CP47080 104 aa5.7□□□□□ -1.5
SDO1YLR022C RIM21P48565 533 aa5.7□□□□□ -1.5
SDO1YLR022C YNL108CP53929 270 aa5.7□□□□□ -1.5
SDO1YLR022C SYT1Q06836 1226 aa5.7□□□□□ -1.5
SDO1YLR022C SBE2P42223 864 aaKnown RBP5.69□□□□□ -1.5
SDO1YLR022C HDA3Q06623 655 aa5.69□□□□□ -1.5
SDO1YLR022C TY1B-HO13535 1793 aa5.69□□□□□ -1.5
SDO1YLR022C TY1B-DR5P0C2I2 1755 aa5.69□□□□□ -1.5
SDO1YLR022C TY1B-DR6P0C2I3 1755 aa5.69□□□□□ -1.5
SDO1YLR022C TY1B-LR2P0C2I5 1755 aa5.69□□□□□ -1.5
SDO1YLR022C TY1B-LR3P0C2I6 1755 aaKnown RBP5.69□□□□□ -1.5
SDO1YLR022C TY1B-PR1P0C2I9 1755 aaKnown RBP5.69□□□□□ -1.5
SDO1YLR022C TY1B-PR2P0C2J0 1756 aa5.69□□□□□ -1.5
SDO1YLR022C TY1B-PR3P0C2J1 1755 aaKnown RBP5.69□□□□□ -1.5
SDO1YLR022C TY1B-JR1P47098 1755 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms