RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W NRD1P53617 575 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
SNX4YJL036W TDA6Q06466 467 aa6.43□□□□□ -1.38
SNX4YJL036W TBS1P38114 1094 aa6.42□□□□□ -1.38
SNX4YJL036W GUA1P38625 525 aaKnown RBP6.42□□□□□ -1.38
SNX4YJL036W SKN7P38889 622 aa6.42□□□□□ -1.38
SNX4YJL036W UTP7P40055 554 aaKnown RBP6.42□□□□□ -1.38
SNX4YJL036W SUM1P46676 1062 aa6.4□□□□□ -1.38
SNX4YJL036W YDJ1P25491 409 aaKnown RBP6.39□□□□□ -1.39
SNX4YJL036W YMR187CQ03236 431 aa6.39□□□□□ -1.39
SNX4YJL036W YBL036CP38197 257 aa6.38□□□□□ -1.39
SNX4YJL036W JJJ2P46997 583 aa6.38□□□□□ -1.39
SNX4YJL036W HPC2Q01448 625 aa6.38□□□□□ -1.39
SNX4YJL036W GLT1Q12680 2145 aaKnown RBP6.38□□□□□ -1.39
SNX4YJL036W SLX8P40072 274 aa6.37□□□□□ -1.39
SNX4YJL036W ALA1P40825 983 aaKnown RBP6.37□□□□□ -1.39
SNX4YJL036W GPM1P00950 247 aaKnown RBP6.36□□□□□ -1.39
SNX4YJL036W IRE1P32361 1115 aa6.36□□□□□ -1.39
SNX4YJL036W SHM1P37292 490 aaPredicted RBP6.36□□□□□ -1.39
SNX4YJL036W MCX1P38323 520 aaPredicted RBP6.36□□□□□ -1.39
SNX4YJL036W YNR014WP53719 212 aa6.36□□□□□ -1.39
SNX4YJL036W SBP1P10080 294 aaKnown RBP6.35□□□□□ -1.39
SNX4YJL036W FPS1P23900 669 aa6.35□□□□□ -1.39
SNX4YJL036W SOH1P38633 127 aa6.35□□□□□ -1.39
SNX4YJL036W BRL1P38770 471 aa6.35□□□□□ -1.39
SNX4YJL036W UTP13Q05946 817 aaKnown RBP6.35□□□□□ -1.39
SNX4YJL036W HDA3Q06623 655 aa6.35□□□□□ -1.39
SNX4YJL036W ATG3P40344 310 aa6.33□□□□□ -1.4
SNX4YJL036W YCK2P23292 546 aaKnown RBP6.32□□□□□ -1.4
SNX4YJL036W PSH1Q12161 406 aa6.32□□□□□ -1.4
SNX4YJL036W PDC6P26263 563 aaKnown RBP6.31□□□□□ -1.4
SNX4YJL036W MRPL16P38064 232 aa6.31□□□□□ -1.4
SNX4YJL036W YPP1P46951 817 aa6.31□□□□□ -1.4
SNX4YJL036W BOI2P39969 1040 aa6.3□□□□□ -1.4
SNX4YJL036W BIO2P32451 375 aa6.29□□□□□ -1.4
SNX4YJL036W TFB3Q03290 321 aa6.29□□□□□ -1.4
SNX4YJL036W YDR215CQ12240 137 aa6.29□□□□□ -1.4
SNX4YJL036W YPQ2Q06328 317 aa6.28□□□□□ -1.4
SNX4YJL036W STB3Q12427 513 aa6.28□□□□□ -1.4
SNX4YJL036W RPS31P05759 152 aaKnown RBP6.27□□□□□ -1.41
SNX4YJL036W SUP45P12385 437 aaKnown RBP6.27□□□□□ -1.41
SNX4YJL036W PDC5P16467 563 aaKnown RBP6.27□□□□□ -1.41
SNX4YJL036W PKC1P24583 1151 aa6.27□□□□□ -1.41
SNX4YJL036W KNS1P32350 737 aaPredicted RBP6.27□□□□□ -1.41
SNX4YJL036W SPR3P41901 512 aa6.27□□□□□ -1.41
SNX4YJL036W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
SNX4YJL036W MET1P36150 593 aa6.26□□□□□ -1.41
SNX4YJL036W SLN1P39928 1220 aaPredicted RBP6.26□□□□□ -1.41
SNX4YJL036W ENO2P00925 437 aaKnown RBP6.25□□□□□ -1.41
SNX4YJL036W TY1A-DR2Q03964 440 aaKnown RBP6.25□□□□□ -1.41
SNX4YJL036W SWI5P08153 709 aa6.24□□□□□ -1.41
SNX4YJL036W AMN1P38285 549 aaPredicted RBP6.24□□□□□ -1.41
SNX4YJL036W YNL108CP53929 270 aa6.24□□□□□ -1.41
SNX4YJL036W MCA1Q08601 432 aa6.23□□□□□ -1.41
SNX4YJL036W LEU1P07264 779 aaKnown RBP6.22□□□□□ -1.41
SNX4YJL036W RDS2P19541 446 aaKnown RBP6.21□□□□□ -1.42
SNX4YJL036W AIM9P40053 627 aaKnown RBP6.21□□□□□ -1.42
SNX4YJL036W RIM21P48565 533 aa6.21□□□□□ -1.42
SNX4YJL036W MSC7P38694 644 aa6.2□□□□□ -1.42
SNX4YJL036W LSB6P42951 607 aa6.2□□□□□ -1.42
SNX4YJL036W ALD2P47771 506 aa6.2□□□□□ -1.42
SNX4YJL036W TAT1P38085 619 aa6.19□□□□□ -1.42
SNX4YJL036W YNL165WP53891 406 aa6.19□□□□□ -1.42
SNX4YJL036W RPS6AP0CX37 236 aaKnown RBP6.18□□□□□ -1.42
SNX4YJL036W RPS6BP0CX38 236 aaPredicted RBP6.18□□□□□ -1.42
SNX4YJL036W MCM1P11746 286 aa6.18□□□□□ -1.42
SNX4YJL036W RPP1AP05318 106 aaPredicted RBP6.17□□□□□ -1.42
SNX4YJL036W RGP1P16664 663 aa6.17□□□□□ -1.42
SNX4YJL036W YFL034WP43564 1073 aa6.16□□□□□ -1.42
SNX4YJL036W PRY1P47032 299 aa6.16□□□□□ -1.42
SNX4YJL036W YTA6P40328 754 aa6.15□□□□□ -1.42
SNX4YJL036W NTH2P35172 780 aa6.14□□□□□ -1.43
SNX4YJL036W MLF3P32047 452 aa6.13□□□□□ -1.43
SNX4YJL036W YJL007CP47080 104 aa6.13□□□□□ -1.43
SNX4YJL036W YPL034WQ03083 165 aa6.12□□□□□ -1.43
SNX4YJL036W TPS3P38426 1054 aaKnown RBP6.11□□□□□ -1.43
SNX4YJL036W MRX10Q05648 414 aa6.11□□□□□ -1.43
SNX4YJL036W Q0182Q9ZZW1 134 aa6.11□□□□□ -1.43
SNX4YJL036W PDI1P17967 522 aaKnown RBP6.1□□□□□ -1.43
SNX4YJL036W HGH1P48362 394 aaKnown RBP6.1□□□□□ -1.43
SNX4YJL036W NHA1Q99271 985 aa6.1□□□□□ -1.43
SNX4YJL036W MAC1P35192 417 aa6.09□□□□□ -1.43
SNX4YJL036W HEH2Q03281 663 aa6.09□□□□□ -1.43
SNX4YJL036W TSC13Q99190 310 aa6.09□□□□□ -1.43
SNX4YJL036W ENO1P00924 437 aaKnown RBP6.08□□□□□ -1.44
SNX4YJL036W PGM2P37012 569 aaKnown RBP6.08□□□□□ -1.44
SNX4YJL036W ALG14P38242 237 aa6.08□□□□□ -1.44
SNX4YJL036W PRK1P40494 810 aa6.08□□□□□ -1.44
SNX4YJL036W CYT1P07143 309 aa6.07□□□□□ -1.44
SNX4YJL036W BUD9P53226 547 aa6.07□□□□□ -1.44
SNX4YJL036W BIM1P40013 344 aa6.06□□□□□ -1.44
SNX4YJL036W ALO1P54783 526 aaKnown RBP6.06□□□□□ -1.44
SNX4YJL036W SKP1P52286 194 aa6.05□□□□□ -1.44
SNX4YJL036W MTO1P53070 669 aa6.05□□□□□ -1.44
SNX4YJL036W TIF1P10081 395 aaKnown RBP6.04□□□□□ -1.44
SNX4YJL036W NAR1P23503 491 aaKnown RBP6.04□□□□□ -1.44
SNX4YJL036W RTG2P32608 588 aaKnown RBP6.04□□□□□ -1.44
SNX4YJL036W PEP12P32854 288 aa6.04□□□□□ -1.44
SNX4YJL036W RPL34BP40525 121 aaKnown RBP6.04□□□□□ -1.44
SNX4YJL036W NCL1P38205 684 aaKnown RBP6.03□□□□□ -1.44
SNX4YJL036W ATG32P40458 529 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms