RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YBL036CP38197 257 aa5.29□□□□□ -1.56
PDX1YGR193C SHM1P37292 490 aaPredicted RBP5.28□□□□□ -1.56
PDX1YGR193C YDR461C-AQ2V2P7 80 aa5.28□□□□□ -1.56
PDX1YGR193C BIO2P32451 375 aa5.27□□□□□ -1.57
PDX1YGR193C AHP1P38013 176 aaKnown RBP5.27□□□□□ -1.57
PDX1YGR193C SOH1P38633 127 aa5.27□□□□□ -1.57
PDX1YGR193C TDA6Q06466 467 aa5.27□□□□□ -1.57
PDX1YGR193C YPR053CQ6Q5F3 151 aa5.27□□□□□ -1.57
PDX1YGR193C PKC1P24583 1151 aa5.26□□□□□ -1.57
PDX1YGR193C TBS1P38114 1094 aa5.26□□□□□ -1.57
PDX1YGR193C SLX8P40072 274 aa5.26□□□□□ -1.57
PDX1YGR193C SUM1P46676 1062 aa5.26□□□□□ -1.57
PDX1YGR193C HPC2Q01448 625 aa5.26□□□□□ -1.57
PDX1YGR193C JJJ2P46997 583 aa5.25□□□□□ -1.57
PDX1YGR193C TFB3Q03290 321 aa5.25□□□□□ -1.57
PDX1YGR193C HDA3Q06623 655 aa5.24□□□□□ -1.57
PDX1YGR193C RPN1P38764 993 aaKnown RBP5.23□□□□□ -1.57
PDX1YGR193C ALA1P40825 983 aaKnown RBP5.23□□□□□ -1.57
PDX1YGR193C IRE1P32361 1115 aa5.22□□□□□ -1.57
PDX1YGR193C SKN7P38889 622 aa5.22□□□□□ -1.57
PDX1YGR193C PSH1Q12161 406 aa5.22□□□□□ -1.57
PDX1YGR193C ENO2P00925 437 aaKnown RBP5.21□□□□□ -1.58
PDX1YGR193C GPM1P00950 247 aaKnown RBP5.21□□□□□ -1.58
PDX1YGR193C NRD1P53617 575 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58 RIP-Chip
PDX1YGR193C UTP13Q05946 817 aaKnown RBP5.21□□□□□ -1.58
PDX1YGR193C RPS31P05759 152 aaKnown RBP5.2□□□□□ -1.58
PDX1YGR193C SUP45P12385 437 aaKnown RBP5.2□□□□□ -1.58
PDX1YGR193C PDC6P26263 563 aaKnown RBP5.2□□□□□ -1.58
PDX1YGR193C BRL1P38770 471 aa5.2□□□□□ -1.58
PDX1YGR193C YNL108CP53929 270 aa5.2□□□□□ -1.58
PDX1YGR193C YMR187CQ03236 431 aa5.2□□□□□ -1.58
PDX1YGR193C YCK2P23292 546 aaKnown RBP5.19□□□□□ -1.58
PDX1YGR193C MRPL16P38064 232 aa5.19□□□□□ -1.58
PDX1YGR193C YNR014WP53719 212 aa5.19□□□□□ -1.58
PDX1YGR193C YPQ2Q06328 317 aa5.19□□□□□ -1.58
PDX1YGR193C RDS2P19541 446 aaKnown RBP5.18□□□□□ -1.58
PDX1YGR193C FPS1P23900 669 aa5.18□□□□□ -1.58
PDX1YGR193C NAP1P25293 417 aaKnown RBP5.18□□□□□ -1.58
PDX1YGR193C MCX1P38323 520 aaPredicted RBP5.18□□□□□ -1.58
PDX1YGR193C YPP1P46951 817 aa5.18□□□□□ -1.58
PDX1YGR193C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
PDX1YGR193C STB3Q12427 513 aa5.18□□□□□ -1.58
PDX1YGR193C AIM44Q99299 758 aa5.18□□□□□ -1.58
PDX1YGR193C ATG3P40344 310 aa5.17□□□□□ -1.58
PDX1YGR193C RIM21P48565 533 aa5.17□□□□□ -1.58
PDX1YGR193C SWI5P08153 709 aa5.16□□□□□ -1.58
PDX1YGR193C YRB30P53107 440 aaPredicted RBP5.16□□□□□ -1.58
PDX1YGR193C YDR215CQ12240 137 aa5.16□□□□□ -1.58
PDX1YGR193C SLN1P39928 1220 aaPredicted RBP5.15□□□□□ -1.59
PDX1YGR193C BOI2P39969 1040 aa5.15□□□□□ -1.59
PDX1YGR193C SPR3P41901 512 aa5.15□□□□□ -1.59
PDX1YGR193C YNL165WP53891 406 aa5.15□□□□□ -1.59
PDX1YGR193C PDC5P16467 563 aaKnown RBP5.14□□□□□ -1.59
PDX1YGR193C ALD2P47771 506 aa5.14□□□□□ -1.59
PDX1YGR193C TY1A-DR2Q03964 440 aaKnown RBP5.14□□□□□ -1.59
PDX1YGR193C SBP1P10080 294 aaKnown RBP5.13□□□□□ -1.59
PDX1YGR193C AIM9P40053 627 aaKnown RBP5.13□□□□□ -1.59
PDX1YGR193C LEU1P07264 779 aaKnown RBP5.12□□□□□ -1.59
PDX1YGR193C MSC7P38694 644 aa5.12□□□□□ -1.59
PDX1YGR193C MCA1Q08601 432 aa5.12□□□□□ -1.59
PDX1YGR193C RPS6AP0CX37 236 aaKnown RBP5.11□□□□□ -1.59
PDX1YGR193C RPS6BP0CX38 236 aaPredicted RBP5.11□□□□□ -1.59
PDX1YGR193C KNS1P32350 737 aaPredicted RBP5.11□□□□□ -1.59
PDX1YGR193C AMN1P38285 549 aaPredicted RBP5.1□□□□□ -1.59
PDX1YGR193C YJL007CP47080 104 aa5.09□□□□□ -1.59
PDX1YGR193C MRX10Q05648 414 aa5.09□□□□□ -1.59
PDX1YGR193C MCM1P11746 286 aa5.08□□□□□ -1.6
PDX1YGR193C MET1P36150 593 aa5.08□□□□□ -1.6
PDX1YGR193C ENO1P00924 437 aaKnown RBP5.07□□□□□ -1.6
PDX1YGR193C RGP1P16664 663 aa5.07□□□□□ -1.6
PDX1YGR193C MLF3P32047 452 aa5.07□□□□□ -1.6
PDX1YGR193C NTH2P35172 780 aa5.07□□□□□ -1.6
PDX1YGR193C PRY1P47032 299 aa5.07□□□□□ -1.6
PDX1YGR193C PDI1P17967 522 aaKnown RBP5.06□□□□□ -1.6
PDX1YGR193C LSB6P42951 607 aa5.06□□□□□ -1.6
PDX1YGR193C IOC4Q04213 475 aa5.06□□□□□ -1.6
PDX1YGR193C GLT1Q12680 2145 aaKnown RBP5.05□□□□□ -1.6
PDX1YGR193C TAT1P38085 619 aa5.04□□□□□ -1.6
PDX1YGR193C ATG32P40458 529 aa5.04□□□□□ -1.6
PDX1YGR193C YFL034WP43564 1073 aa5.04□□□□□ -1.6
PDX1YGR193C Q0182Q9ZZW1 134 aa5.04□□□□□ -1.6
PDX1YGR193C RPP1AP05318 106 aaPredicted RBP5.03□□□□□ -1.6
PDX1YGR193C SIS2P36024 562 aa5.03□□□□□ -1.6
PDX1YGR193C BIM1P40013 344 aa5.03□□□□□ -1.6
PDX1YGR193C YTA6P40328 754 aa5.03□□□□□ -1.6
PDX1YGR193C CYT1P07143 309 aa5.02□□□□□ -1.61
PDX1YGR193C TIF1P10081 395 aaKnown RBP5.02□□□□□ -1.61
PDX1YGR193C PEP12P32854 288 aa5.02□□□□□ -1.61
PDX1YGR193C PRK1P40494 810 aa5.02□□□□□ -1.61
PDX1YGR193C TSC13Q99190 310 aa5.02□□□□□ -1.61
PDX1YGR193C PGM2P37012 569 aaKnown RBP5□□□□□ -1.61
PDX1YGR193C YPL034WQ03083 165 aa5□□□□□ -1.61
PDX1YGR193C RTG2P32608 588 aaKnown RBP4.99□□□□□ -1.61
PDX1YGR193C TPS3P38426 1054 aaKnown RBP4.99□□□□□ -1.61
PDX1YGR193C MTO1P53070 669 aa4.99□□□□□ -1.61
PDX1YGR193C ALG14P38242 237 aa4.98□□□□□ -1.61
PDX1YGR193C ACS2P52910 683 aaKnown RBP4.98□□□□□ -1.61
PDX1YGR193C NAR1P23503 491 aaKnown RBP4.97□□□□□ -1.61
PDX1YGR193C KTR7P40504 517 aa4.97□□□□□ -1.61
PDX1YGR193C SKP1P52286 194 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms