RNA–Protein interactions for RNA: YER128W

VFA1, Transcript of Protein that interacts with Vps4p and has a role in vacuolar sorting, yeastyeast

Gene VFA1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VFA1YER128W HAL5P38970 855 aaKnown RBP5.85□□□□□ -1.47
VFA1YER128W TDA6Q06466 467 aa5.85□□□□□ -1.47
VFA1YER128W YDJ1P25491 409 aaKnown RBP5.84□□□□□ -1.47
VFA1YER128W SUM1P46676 1062 aa5.84□□□□□ -1.47
VFA1YER128W YMR187CQ03236 431 aa5.84□□□□□ -1.47
VFA1YER128W SBP1P10080 294 aaKnown RBP5.83□□□□□ -1.48
VFA1YER128W ATG3P40344 310 aa5.83□□□□□ -1.48
VFA1YER128W YNR014WP53719 212 aa5.83□□□□□ -1.48
VFA1YER128W LEU3P08638 886 aa5.82□□□□□ -1.48
VFA1YER128W BRL1P38770 471 aa5.82□□□□□ -1.48
VFA1YER128W SKN7P38889 622 aa5.82□□□□□ -1.48
VFA1YER128W JJJ2P46997 583 aa5.82□□□□□ -1.48
VFA1YER128W RQC2Q12532 1038 aaKnown RBP5.82□□□□□ -1.48
VFA1YER128W FPS1P23900 669 aa5.81□□□□□ -1.48
VFA1YER128W IRE1P32361 1115 aa5.81□□□□□ -1.48
VFA1YER128W SOH1P38633 127 aa5.81□□□□□ -1.48
VFA1YER128W SLX8P40072 274 aa5.81□□□□□ -1.48
VFA1YER128W HPC2Q01448 625 aa5.81□□□□□ -1.48
VFA1YER128W RPN1P38764 993 aaKnown RBP5.8□□□□□ -1.48
VFA1YER128W YPP1P46951 817 aa5.8□□□□□ -1.48
VFA1YER128W UTP13Q05946 817 aaKnown RBP5.8□□□□□ -1.48
VFA1YER128W HDA3Q06623 655 aa5.8□□□□□ -1.48
VFA1YER128W GPM1P00950 247 aaKnown RBP5.79□□□□□ -1.48
VFA1YER128W MCX1P38323 520 aaPredicted RBP5.78□□□□□ -1.48
VFA1YER128W SHM1P37292 490 aaPredicted RBP5.77□□□□□ -1.49
VFA1YER128W MRPL16P38064 232 aa5.77□□□□□ -1.49
VFA1YER128W BOI2P39969 1040 aa5.77□□□□□ -1.49
VFA1YER128W TFB3Q03290 321 aa5.76□□□□□ -1.49
VFA1YER128W PDC6P26263 563 aaKnown RBP5.75□□□□□ -1.49
VFA1YER128W MET1P36150 593 aa5.75□□□□□ -1.49
VFA1YER128W PSH1Q12161 406 aa5.75□□□□□ -1.49
VFA1YER128W STB3Q12427 513 aa5.75□□□□□ -1.49
VFA1YER128W BIO2P32451 375 aa5.74□□□□□ -1.49
VFA1YER128W PKC1P24583 1151 aa5.73□□□□□ -1.49
VFA1YER128W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
VFA1YER128W YCK2P23292 546 aaKnown RBP5.72□□□□□ -1.49
VFA1YER128W YNL108CP53929 270 aa5.72□□□□□ -1.49
VFA1YER128W ENO2P00925 437 aaKnown RBP5.71□□□□□ -1.5
VFA1YER128W SUP45P12385 437 aaKnown RBP5.71□□□□□ -1.5
VFA1YER128W PDC5P16467 563 aaKnown RBP5.71□□□□□ -1.5
VFA1YER128W KNS1P32350 737 aaPredicted RBP5.71□□□□□ -1.5
VFA1YER128W YDR215CQ12240 137 aa5.71□□□□□ -1.5
VFA1YER128W SWI5P08153 709 aa5.7□□□□□ -1.5
VFA1YER128W SPR3P41901 512 aa5.7□□□□□ -1.5
VFA1YER128W YPQ2Q06328 317 aa5.7□□□□□ -1.5
VFA1YER128W RPS31P05759 152 aaKnown RBP5.69□□□□□ -1.5
VFA1YER128W SLN1P39928 1220 aaPredicted RBP5.69□□□□□ -1.5
VFA1YER128W AIM9P40053 627 aaKnown RBP5.69□□□□□ -1.5
VFA1YER128W RPP1AP05318 106 aaPredicted RBP5.68□□□□□ -1.5
VFA1YER128W TY1A-DR2Q03964 440 aaKnown RBP5.68□□□□□ -1.5
VFA1YER128W TAT1P38085 619 aa5.67□□□□□ -1.5
VFA1YER128W AMN1P38285 549 aaPredicted RBP5.67□□□□□ -1.5
VFA1YER128W RIM21P48565 533 aa5.67□□□□□ -1.5
VFA1YER128W LEU1P07264 779 aaKnown RBP5.66□□□□□ -1.5
VFA1YER128W RPS6AP0CX37 236 aaKnown RBP5.66□□□□□ -1.5
VFA1YER128W RPS6BP0CX38 236 aaPredicted RBP5.66□□□□□ -1.5
VFA1YER128W YTA6P40328 754 aa5.66□□□□□ -1.5
VFA1YER128W LSB6P42951 607 aa5.66□□□□□ -1.5
VFA1YER128W YFL034WP43564 1073 aa5.66□□□□□ -1.5
VFA1YER128W MCA1Q08601 432 aa5.66□□□□□ -1.5
VFA1YER128W MCM1P11746 286 aa5.64□□□□□ -1.51
VFA1YER128W ALD2P47771 506 aa5.64□□□□□ -1.51
VFA1YER128W GLT1Q12680 2145 aaKnown RBP5.63□□□□□ -1.51
VFA1YER128W RGP1P16664 663 aa5.63□□□□□ -1.51
VFA1YER128W RDS2P19541 446 aaKnown RBP5.63□□□□□ -1.51
VFA1YER128W NTH2P35172 780 aa5.63□□□□□ -1.51
VFA1YER128W YNL165WP53891 406 aa5.63□□□□□ -1.51
VFA1YER128W MSC7P38694 644 aa5.62□□□□□ -1.51
VFA1YER128W PRY1P47032 299 aa5.62□□□□□ -1.51
VFA1YER128W YJL007CP47080 104 aa5.62□□□□□ -1.51
VFA1YER128W MLF3P32047 452 aa5.6□□□□□ -1.51
VFA1YER128W PDI1P17967 522 aaKnown RBP5.59□□□□□ -1.51
VFA1YER128W MAC1P35192 417 aa5.59□□□□□ -1.51
VFA1YER128W Q0182Q9ZZW1 134 aa5.59□□□□□ -1.51
VFA1YER128W TPS3P38426 1054 aaKnown RBP5.58□□□□□ -1.52
VFA1YER128W YPL034WQ03083 165 aa5.58□□□□□ -1.52
VFA1YER128W TSC13Q99190 310 aa5.58□□□□□ -1.52
VFA1YER128W NHA1Q99271 985 aa5.58□□□□□ -1.52
VFA1YER128W HEH2Q03281 663 aa5.57□□□□□ -1.52
VFA1YER128W ENO1P00924 437 aaKnown RBP5.56□□□□□ -1.52
VFA1YER128W CYT1P07143 309 aa5.56□□□□□ -1.52
VFA1YER128W PGM2P37012 569 aaKnown RBP5.56□□□□□ -1.52
VFA1YER128W ALG14P38242 237 aa5.56□□□□□ -1.52
VFA1YER128W MRX10Q05648 414 aa5.56□□□□□ -1.52
VFA1YER128W MTO1P53070 669 aa5.55□□□□□ -1.52
VFA1YER128W RTG2P32608 588 aaKnown RBP5.53□□□□□ -1.52
VFA1YER128W NCL1P38205 684 aaKnown RBP5.53□□□□□ -1.52
VFA1YER128W PRK1P40494 810 aa5.53□□□□□ -1.52
VFA1YER128W BUD9P53226 547 aa5.53□□□□□ -1.52
VFA1YER128W TIF1P10081 395 aaKnown RBP5.52□□□□□ -1.53
VFA1YER128W BIM1P40013 344 aa5.52□□□□□ -1.53
VFA1YER128W RPL34BP40525 121 aaKnown RBP5.52□□□□□ -1.53
VFA1YER128W ALO1P54783 526 aaKnown RBP5.52□□□□□ -1.53
VFA1YER128W ATG32P40458 529 aa5.51□□□□□ -1.53
VFA1YER128W UTP4Q06679 776 aaKnown RBP5.51□□□□□ -1.53
VFA1YER128W NAR1P23503 491 aaKnown RBP5.5□□□□□ -1.53
VFA1YER128W NAB2P32505 525 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
VFA1YER128W OMA1P36163 345 aa5.5□□□□□ -1.53
VFA1YER128W SKP1P52286 194 aa5.5□□□□□ -1.53
VFA1YER128W GIS4Q04233 774 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms