RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W LEO1P38439 464 aa7.17□□□□□ -1.26
PRE1YER012W ALA1P40825 983 aaKnown RBP7.17□□□□□ -1.26
PRE1YER012W YPR204WQ08995 1032 aa7.17□□□□□ -1.26
PRE1YER012W CUZ1P53899 274 aa7.16□□□□□ -1.26
PRE1YER012W SUM1P46676 1062 aa7.15□□□□□ -1.26
PRE1YER012W MSN5P52918 1224 aa7.15□□□□□ -1.26
PRE1YER012W KTR7P40504 517 aa7.14□□□□□ -1.27
PRE1YER012W DMA2P53924 522 aa7.14□□□□□ -1.27
PRE1YER012W AHP1P38013 176 aaKnown RBP7.13□□□□□ -1.27
PRE1YER012W AIM9P40053 627 aaKnown RBP7.13□□□□□ -1.27
PRE1YER012W HGH1P48362 394 aaKnown RBP7.13□□□□□ -1.27
PRE1YER012W SWI5P08153 709 aa7.12□□□□□ -1.27
PRE1YER012W PDI1P17967 522 aaKnown RBP7.12□□□□□ -1.27
PRE1YER012W SHM1P37292 490 aaPredicted RBP7.11□□□□□ -1.27
PRE1YER012W JJJ2P46997 583 aa7.11□□□□□ -1.27
PRE1YER012W UBP15P50101 1230 aa7.11□□□□□ -1.27
PRE1YER012W YMR265CQ03508 461 aaKnown RBP7.09□□□□□ -1.27
PRE1YER012W RPS6AP0CX37 236 aaKnown RBP7.08□□□□□ -1.28
PRE1YER012W RPS6BP0CX38 236 aaPredicted RBP7.08□□□□□ -1.28
PRE1YER012W NTH2P35172 780 aa7.08□□□□□ -1.28
PRE1YER012W JJJ3P47138 172 aa7.08□□□□□ -1.28
PRE1YER012W LYS5P50113 272 aa7.08□□□□□ -1.28
PRE1YER012W DPH6Q12429 685 aa7.08□□□□□ -1.28
PRE1YER012W IRE1P32361 1115 aa7.07□□□□□ -1.28
PRE1YER012W PEP12P32854 288 aa7.07□□□□□ -1.28
PRE1YER012W MDJ1P35191 511 aa7.07□□□□□ -1.28
PRE1YER012W CEM1P39525 442 aa7.07□□□□□ -1.28
PRE1YER012W DIT1P21623 536 aa7.06□□□□□ -1.28
PRE1YER012W KRE33P53914 1056 aaKnown RBP7.06□□□□□ -1.28
PRE1YER012W YPQ2Q06328 317 aa7.06□□□□□ -1.28
PRE1YER012W ADE12P80210 433 aaKnown RBP7.05□□□□□ -1.28
PRE1YER012W PSH1Q12161 406 aa7.05□□□□□ -1.28
PRE1YER012W YNL165WP53891 406 aa7.04□□□□□ -1.28
PRE1YER012W RPS31P05759 152 aaKnown RBP7.03□□□□□ -1.28
PRE1YER012W PDC6P26263 563 aaKnown RBP7.03□□□□□ -1.28
PRE1YER012W SYT1Q06836 1226 aa7.03□□□□□ -1.28
PRE1YER012W TSC13Q99190 310 aa7.03□□□□□ -1.28
PRE1YER012W YFL034WP43564 1073 aa7.02□□□□□ -1.29
PRE1YER012W ACS2P52910 683 aaKnown RBP7.02□□□□□ -1.29
PRE1YER012W MRPL16P38064 232 aa7.01□□□□□ -1.29
PRE1YER012W THI72Q08579 599 aa6.99□□□□□ -1.29
PRE1YER012W STB3Q12427 513 aa6.99□□□□□ -1.29
PRE1YER012W CYT1P07143 309 aa6.98□□□□□ -1.29
PRE1YER012W PHO87P25360 923 aa6.97□□□□□ -1.29
PRE1YER012W MLF3P32047 452 aa6.97□□□□□ -1.29
PRE1YER012W NSG2P53898 299 aa6.97□□□□□ -1.29
PRE1YER012W Q0182Q9ZZW1 134 aa6.97□□□□□ -1.29
PRE1YER012W YDR461C-AQ2V2P7 80 aa6.96□□□□□ -1.3
PRE1YER012W ICP55P40051 511 aa6.95□□□□□ -1.3
PRE1YER012W SBE2P42223 864 aaKnown RBP6.95□□□□□ -1.3
PRE1YER012W ALD2P47771 506 aa6.95□□□□□ -1.3
PRE1YER012W MTC5Q03897 1148 aa6.95□□□□□ -1.3
PRE1YER012W AI1P03875 834 aa6.94□□□□□ -1.3
PRE1YER012W FPS1P23900 669 aa6.94□□□□□ -1.3
PRE1YER012W CPS1P27614 576 aa6.94□□□□□ -1.3
PRE1YER012W TTI1P36097 1038 aa6.94□□□□□ -1.3
PRE1YER012W YFL066CP43538 392 aa6.94□□□□□ -1.3
PRE1YER012W ECM23Q02710 187 aa6.94□□□□□ -1.3
PRE1YER012W TGL4P36165 910 aa6.93□□□□□ -1.3
PRE1YER012W ROM1P53046 1155 aa6.93□□□□□ -1.3
PRE1YER012W MCM1P11746 286 aa6.92□□□□□ -1.3
PRE1YER012W GAL2P13181 574 aa6.92□□□□□ -1.3
PRE1YER012W HAP4P14064 554 aa6.92□□□□□ -1.3
PRE1YER012W SPR3P41901 512 aa6.92□□□□□ -1.3
PRE1YER012W PUS1Q12211 544 aaKnown RBP6.92□□□□□ -1.3
PRE1YER012W LEU1P07264 779 aaKnown RBP6.91□□□□□ -1.3
PRE1YER012W YTA6P40328 754 aa6.91□□□□□ -1.3
PRE1YER012W GAS4Q08271 471 aa6.9□□□□□ -1.3
PRE1YER012W MTO1P53070 669 aa6.89□□□□□ -1.31
PRE1YER012W PHM7Q12252 991 aa6.89□□□□□ -1.31
PRE1YER012W GPM1P00950 247 aaKnown RBP6.88□□□□□ -1.31
PRE1YER012W RGP1P16664 663 aa6.88□□□□□ -1.31
PRE1YER012W SIS2P36024 562 aa6.87□□□□□ -1.31
PRE1YER012W UBX7P38349 436 aa6.87□□□□□ -1.31
PRE1YER012W LSB3P43603 459 aaKnown RBP6.87□□□□□ -1.31
PRE1YER012W TDA6Q06466 467 aa6.87□□□□□ -1.31
PRE1YER012W YNR014WP53719 212 aa6.86□□□□□ -1.31
PRE1YER012W TY1A-DR2Q03964 440 aaKnown RBP6.86□□□□□ -1.31
PRE1YER012W UBP1P25037 809 aa6.85□□□□□ -1.31
PRE1YER012W NGR1P32831 672 aaKnown RBP6.85□□□□□ -1.31
PRE1YER012W MSC7P38694 644 aa6.85□□□□□ -1.31
PRE1YER012W HXT5P38695 592 aa6.85□□□□□ -1.31
PRE1YER012W VAN1P23642 535 aa6.83□□□□□ -1.32
PRE1YER012W PUP1P25043 261 aa6.83□□□□□ -1.32
PRE1YER012W SUV3P32580 737 aa6.83□□□□□ -1.32
PRE1YER012W PDC5P16467 563 aaKnown RBP6.82□□□□□ -1.32
PRE1YER012W FOX2Q02207 900 aaKnown RBP6.82□□□□□ -1.32
PRE1YER012W BOI2P39969 1040 aa6.81□□□□□ -1.32
PRE1YER012W YML083CQ04526 418 aa6.81□□□□□ -1.32
PRE1YER012W YPR053CQ6Q5F3 151 aa6.81□□□□□ -1.32
PRE1YER012W SCD5P34758 872 aa6.8□□□□□ -1.32
PRE1YER012W QDR2P40474 542 aa6.79□□□□□ -1.32
PRE1YER012W YNR040WP53736 256 aa6.79□□□□□ -1.32
PRE1YER012W CUS1Q02554 436 aaPredicted RBP6.79□□□□□ -1.32
PRE1YER012W CAB1Q04430 367 aa6.79□□□□□ -1.32
PRE1YER012W KNS1P32350 737 aaPredicted RBP6.78□□□□□ -1.32
PRE1YER012W KAP122P32767 1081 aa6.78□□□□□ -1.32
PRE1YER012W YMR187CQ03236 431 aa6.78□□□□□ -1.32
PRE1YER012W NAB2P32505 525 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
PRE1YER012W UTP4Q06679 776 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms