RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C CSN12P47130 423 aa6.05□□□□□ -1.44
VAB2YEL005C WTM2Q12206 467 aa6.03□□□□□ -1.44
VAB2YEL005C RPP2BP02400 110 aaKnown RBP6.02□□□□□ -1.45
VAB2YEL005C FPS1P23900 669 aa6.02□□□□□ -1.45
VAB2YEL005C GUT2P32191 649 aa6.02□□□□□ -1.45
VAB2YEL005C AHP1P38013 176 aaKnown RBP6.02□□□□□ -1.45
VAB2YEL005C PRY1P47032 299 aa6.02□□□□□ -1.45
VAB2YEL005C ALO1P54783 526 aaKnown RBP6.02□□□□□ -1.45
VAB2YEL005C HPC2Q01448 625 aa6.02□□□□□ -1.45
VAB2YEL005C RAD59Q12223 238 aa6.02□□□□□ -1.45
VAB2YEL005C IRC24P40580 263 aa6.01□□□□□ -1.45
VAB2YEL005C NAF1P53919 492 aaKnown RBP6□□□□□ -1.45
VAB2YEL005C MET1P36150 593 aa5.99□□□□□ -1.45
VAB2YEL005C TFB3Q03290 321 aa5.98□□□□□ -1.45
VAB2YEL005C PDC5P16467 563 aaKnown RBP5.97□□□□□ -1.45
VAB2YEL005C YPL034WQ03083 165 aa5.97□□□□□ -1.45
VAB2YEL005C UTP7P40055 554 aaKnown RBP5.96□□□□□ -1.46
VAB2YEL005C DAT1P13483 248 aaKnown RBP5.95□□□□□ -1.46
VAB2YEL005C KNS1P32350 737 aaPredicted RBP5.95□□□□□ -1.46
VAB2YEL005C OMA1P36163 345 aa5.95□□□□□ -1.46
VAB2YEL005C FRA1Q07825 749 aa5.95□□□□□ -1.46
VAB2YEL005C MRPL16P38064 232 aa5.94□□□□□ -1.46
VAB2YEL005C INP52P50942 1183 aa5.94□□□□□ -1.46
VAB2YEL005C STE20Q03497 939 aaKnown RBP5.94□□□□□ -1.46
VAB2YEL005C RLF2Q12495 606 aa5.94□□□□□ -1.46
VAB2YEL005C UTR2P32623 467 aa5.93□□□□□ -1.46
VAB2YEL005C JJJ2P46997 583 aa5.93□□□□□ -1.46
VAB2YEL005C SHM1P37292 490 aaPredicted RBP5.92□□□□□ -1.46
VAB2YEL005C ISR1Q06098 443 aaKnown RBP5.92□□□□□ -1.46
VAB2YEL005C SPT2P06843 333 aaPredicted RBP5.91□□□□□ -1.46
VAB2YEL005C MAK16P10962 306 aaPredicted RBP5.91□□□□□ -1.46
VAB2YEL005C IRE1P32361 1115 aa5.91□□□□□ -1.46
VAB2YEL005C ALA1P40825 983 aaKnown RBP5.91□□□□□ -1.46
VAB2YEL005C YBL036CP38197 257 aa5.9□□□□□ -1.46
VAB2YEL005C TY1A-DR2Q03964 440 aaKnown RBP5.9□□□□□ -1.46
VAB2YEL005C PKC1P24583 1151 aa5.89□□□□□ -1.47
VAB2YEL005C RPL34BP40525 121 aaKnown RBP5.89□□□□□ -1.47
VAB2YEL005C PSH1Q12161 406 aa5.89□□□□□ -1.47
VAB2YEL005C STB3Q12427 513 aa5.89□□□□□ -1.47
VAB2YEL005C SUM1P46676 1062 aa5.88□□□□□ -1.47
VAB2YEL005C YJL007CP47080 104 aa5.88□□□□□ -1.47
VAB2YEL005C PDC6P26263 563 aaKnown RBP5.86□□□□□ -1.47
VAB2YEL005C SPR3P41901 512 aa5.86□□□□□ -1.47
VAB2YEL005C CSE4P36012 229 aa5.85□□□□□ -1.47
VAB2YEL005C TBS1P38114 1094 aa5.85□□□□□ -1.47
VAB2YEL005C AVT1P47082 602 aa5.85□□□□□ -1.47
VAB2YEL005C HAL5P38970 855 aaKnown RBP5.84□□□□□ -1.47
VAB2YEL005C APL6P46682 809 aa5.84□□□□□ -1.47
VAB2YEL005C ISF1P32488 338 aa5.83□□□□□ -1.48
VAB2YEL005C BIM1P40013 344 aa5.83□□□□□ -1.48
VAB2YEL005C TPS3P38426 1054 aaKnown RBP5.82□□□□□ -1.48
VAB2YEL005C MSC7P38694 644 aa5.81□□□□□ -1.48
VAB2YEL005C EMP47P43555 445 aa5.81□□□□□ -1.48
VAB2YEL005C BUD9P53226 547 aa5.81□□□□□ -1.48
VAB2YEL005C RPS31P05759 152 aaKnown RBP5.8□□□□□ -1.48
VAB2YEL005C SLX8P40072 274 aa5.8□□□□□ -1.48
VAB2YEL005C SPT5P27692 1063 aaKnown RBP5.79□□□□□ -1.48
VAB2YEL005C ATG32P40458 529 aa5.79□□□□□ -1.48
VAB2YEL005C BIO2P32451 375 aa5.78□□□□□ -1.48
VAB2YEL005C YNL108CP53929 270 aa5.78□□□□□ -1.48
VAB2YEL005C TIF1P10081 395 aaKnown RBP5.77□□□□□ -1.49
VAB2YEL005C RTG2P32608 588 aaKnown RBP5.76□□□□□ -1.49
VAB2YEL005C MRX12P47084 519 aa5.76□□□□□ -1.49
VAB2YEL005C NHA1Q99271 985 aa5.76□□□□□ -1.49
VAB2YEL005C PGM2P37012 569 aaKnown RBP5.75□□□□□ -1.49
VAB2YEL005C ALG14P38242 237 aa5.74□□□□□ -1.49
VAB2YEL005C YPP1P46951 817 aa5.74□□□□□ -1.49
VAB2YEL005C MCM16Q12262 181 aa5.74□□□□□ -1.49
VAB2YEL005C LEU1P07264 779 aaKnown RBP5.73□□□□□ -1.49
VAB2YEL005C PGM1P33401 570 aaKnown RBP5.73□□□□□ -1.49
VAB2YEL005C ALD2P47771 506 aa5.73□□□□□ -1.49
VAB2YEL005C HDA3Q06623 655 aa5.73□□□□□ -1.49
VAB2YEL005C GAS5Q08193 484 aa5.73□□□□□ -1.49
VAB2YEL005C YDJ1P25491 409 aaKnown RBP5.72□□□□□ -1.49
VAB2YEL005C AI3P03877 415 aa5.71□□□□□ -1.5
VAB2YEL005C YKR073CP36153 106 aa5.71□□□□□ -1.5
VAB2YEL005C SSA4P22202 642 aaKnown RBP5.7□□□□□ -1.5
VAB2YEL005C ENO2P00925 437 aaKnown RBP5.69□□□□□ -1.5
VAB2YEL005C TRP3P00937 484 aa5.69□□□□□ -1.5
VAB2YEL005C SIS2P36024 562 aa5.69□□□□□ -1.5
VAB2YEL005C YPQ2Q06328 317 aa5.69□□□□□ -1.5
VAB2YEL005C SUP45P12385 437 aaKnown RBP5.68□□□□□ -1.5
VAB2YEL005C RGP1P16664 663 aa5.68□□□□□ -1.5
VAB2YEL005C SOH1P38633 127 aa5.68□□□□□ -1.5
VAB2YEL005C YNL165WP53891 406 aa5.68□□□□□ -1.5
VAB2YEL005C NAR1P23503 491 aaKnown RBP5.67□□□□□ -1.5
VAB2YEL005C AOS1Q06624 347 aa5.67□□□□□ -1.5
VAB2YEL005C ATG3P40344 310 aa5.66□□□□□ -1.5
VAB2YEL005C ENO1P00924 437 aaKnown RBP5.65□□□□□ -1.5
VAB2YEL005C SAC7P17121 654 aa5.65□□□□□ -1.5
VAB2YEL005C CPS1P27614 576 aa5.65□□□□□ -1.5
VAB2YEL005C LIP5P32875 414 aa5.65□□□□□ -1.5
VAB2YEL005C PRK1P40494 810 aa5.65□□□□□ -1.5
VAB2YEL005C RIM21P48565 533 aa5.65□□□□□ -1.5
VAB2YEL005C MED7Q08278 222 aa5.65□□□□□ -1.5
VAB2YEL005C CTH1P47976 325 aa5.64□□□□□ -1.51
VAB2YEL005C GIS4Q04233 774 aa5.64□□□□□ -1.51
VAB2YEL005C RPP1AP05318 106 aaPredicted RBP5.63□□□□□ -1.51
VAB2YEL005C RRM3P38766 723 aa5.63□□□□□ -1.51
VAB2YEL005C ARI1P53111 347 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms