RNA–Protein interactions for RNA: YDR532C

KRE28, Transcript of Subunit of a kinetochore-microtubule binding complex, yeastyeast

Gene KRE28, Length 1,158 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRE28YDR532C UTP13Q05946 817 aaKnown RBP8.21□□□□□ -1.1
KRE28YDR532C TY1A-DR3Q12441 440 aa8.21□□□□□ -1.1
KRE28YDR532C DIT1P21623 536 aa8.19□□□□□ -1.1
KRE28YDR532C MDJ1P35191 511 aa8.19□□□□□ -1.1
KRE28YDR532C AHP1P38013 176 aaKnown RBP8.19□□□□□ -1.1
KRE28YDR532C SOH1P38633 127 aa8.19□□□□□ -1.1
KRE28YDR532C SUP45P12385 437 aaKnown RBP8.18□□□□□ -1.1
KRE28YDR532C UTP7P40055 554 aaKnown RBP8.18□□□□□ -1.1
KRE28YDR532C YMR265CQ03508 461 aaKnown RBP8.18□□□□□ -1.1
KRE28YDR532C AI1P03875 834 aa8.16□□□□□ -1.1
KRE28YDR532C SLX8P40072 274 aa8.16□□□□□ -1.1
KRE28YDR532C SUM1P46676 1062 aa8.16□□□□□ -1.1
KRE28YDR532C NSG2P53898 299 aa8.16□□□□□ -1.1
KRE28YDR532C YNL108CP53929 270 aa8.16□□□□□ -1.1
KRE28YDR532C HDA3Q06623 655 aa8.16□□□□□ -1.1
KRE28YDR532C SYT1Q06836 1226 aa8.16□□□□□ -1.1
KRE28YDR532C ENO2P00925 437 aaKnown RBP8.15□□□□□ -1.1
KRE28YDR532C KRE33P53914 1056 aaKnown RBP8.14□□□□□ -1.11
KRE28YDR532C THI72Q08579 599 aa8.14□□□□□ -1.11
KRE28YDR532C YDR461C-AQ2V2P7 80 aa8.14□□□□□ -1.11
KRE28YDR532C ALA1P40825 983 aaKnown RBP8.13□□□□□ -1.11
KRE28YDR532C YFL066CP43538 392 aa8.13□□□□□ -1.11
KRE28YDR532C LSB3P43603 459 aaKnown RBP8.13□□□□□ -1.11
KRE28YDR532C JJJ2P46997 583 aa8.12□□□□□ -1.11
KRE28YDR532C ADE12P80210 433 aaKnown RBP8.11□□□□□ -1.11
KRE28YDR532C SPA2P23201 1466 aaKnown RBP8.11□□□□□ -1.11
KRE28YDR532C RIM21P48565 533 aa8.1□□□□□ -1.11
KRE28YDR532C SPT6P23615 1451 aaKnown RBP8.1□□□□□ -1.11
KRE28YDR532C HSL1P34244 1518 aa8.09□□□□□ -1.11
KRE28YDR532C IRE1P32361 1115 aa8.09□□□□□ -1.11
KRE28YDR532C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
KRE28YDR532C SHM1P37292 490 aaPredicted RBP8.07□□□□□ -1.12
KRE28YDR532C RDS2P19541 446 aaKnown RBP8.06□□□□□ -1.12
KRE28YDR532C YJL007CP47080 104 aa8.06□□□□□ -1.12
KRE28YDR532C SWI5P08153 709 aa8.04□□□□□ -1.12
KRE28YDR532C YPQ2Q06328 317 aa8.04□□□□□ -1.12
KRE28YDR532C PDC6P26263 563 aaKnown RBP8.03□□□□□ -1.12
KRE28YDR532C AIM9P40053 627 aaKnown RBP8.03□□□□□ -1.12
KRE28YDR532C PSH1Q12161 406 aa8.03□□□□□ -1.12
KRE28YDR532C FPS1P23900 669 aa8.02□□□□□ -1.13
KRE28YDR532C YPR053CQ6Q5F3 151 aa8.02□□□□□ -1.13
KRE28YDR532C SBE2P42223 864 aaKnown RBP8.01□□□□□ -1.13
KRE28YDR532C CCT8P47079 568 aaKnown RBP8.01□□□□□ -1.13
KRE28YDR532C MRPL16P38064 232 aa8□□□□□ -1.13
KRE28YDR532C MRX10Q05648 414 aa8□□□□□ -1.13
KRE28YDR532C GPM1P00950 247 aaKnown RBP7.99□□□□□ -1.13
KRE28YDR532C RPS31P05759 152 aaKnown RBP7.99□□□□□ -1.13
KRE28YDR532C YFL034WP43564 1073 aa7.99□□□□□ -1.13
KRE28YDR532C TDA6Q06466 467 aa7.99□□□□□ -1.13
KRE28YDR532C RPS6AP0CX37 236 aaKnown RBP7.98□□□□□ -1.13
KRE28YDR532C RPS6BP0CX38 236 aaPredicted RBP7.98□□□□□ -1.13
KRE28YDR532C ENO1P00924 437 aaKnown RBP7.97□□□□□ -1.13
KRE28YDR532C BIM1P40013 344 aa7.97□□□□□ -1.13
KRE28YDR532C STB3Q12427 513 aa7.97□□□□□ -1.13
KRE28YDR532C ATG32P40458 529 aa7.96□□□□□ -1.14
KRE28YDR532C MCM1P11746 286 aa7.95□□□□□ -1.14
KRE28YDR532C NTH2P35172 780 aa7.95□□□□□ -1.14
KRE28YDR532C YNR014WP53719 212 aa7.95□□□□□ -1.14
KRE28YDR532C YMR187CQ03236 431 aa7.95□□□□□ -1.14
KRE28YDR532C LEU1P07264 779 aaKnown RBP7.94□□□□□ -1.14
KRE28YDR532C TIF1P10081 395 aaKnown RBP7.94□□□□□ -1.14
KRE28YDR532C SKN7P38889 622 aa7.94□□□□□ -1.14
KRE28YDR532C SPR3P41901 512 aa7.94□□□□□ -1.14
KRE28YDR532C HGH1P48362 394 aaKnown RBP7.94□□□□□ -1.14
KRE28YDR532C PDI1P17967 522 aaKnown RBP7.92□□□□□ -1.14
KRE28YDR532C RTG2P32608 588 aaKnown RBP7.92□□□□□ -1.14
KRE28YDR532C MCX1P38323 520 aaPredicted RBP7.92□□□□□ -1.14
KRE28YDR532C YNL165WP53891 406 aa7.92□□□□□ -1.14
KRE28YDR532C TSC13Q99190 310 aa7.92□□□□□ -1.14
KRE28YDR532C KNS1P32350 737 aaPredicted RBP7.91□□□□□ -1.14
KRE28YDR532C RPL34BP40525 121 aaKnown RBP7.91□□□□□ -1.14
KRE28YDR532C ALD2P47771 506 aa7.91□□□□□ -1.14
KRE28YDR532C HIR3P47171 1648 aa7.91□□□□□ -1.14
KRE28YDR532C PDC5P16467 563 aaKnown RBP7.9□□□□□ -1.14
KRE28YDR532C PEP12P32854 288 aa7.9□□□□□ -1.14
KRE28YDR532C YTA6P40328 754 aa7.9□□□□□ -1.14
KRE28YDR532C TY1A-DR2Q03964 440 aaKnown RBP7.9□□□□□ -1.14
KRE28YDR532C BOI2P39969 1040 aa7.89□□□□□ -1.15
KRE28YDR532C ECM5Q03214 1411 aa7.87□□□□□ -1.15
KRE28YDR532C RPP1AP05318 106 aaPredicted RBP7.87□□□□□ -1.15
KRE28YDR532C RGP1P16664 663 aa7.87□□□□□ -1.15
KRE28YDR532C MET1P36150 593 aa7.87□□□□□ -1.15
KRE28YDR532C THO2P53552 1597 aaKnown RBP7.87□□□□□ -1.15
KRE28YDR532C BUD4P47136 1447 aa7.86□□□□□ -1.15
KRE28YDR532C CYT1P07143 309 aa7.86□□□□□ -1.15
KRE28YDR532C MLF3P32047 452 aa7.86□□□□□ -1.15
KRE28YDR532C MSC7P38694 644 aa7.86□□□□□ -1.15
KRE28YDR532C YCK2P23292 546 aaKnown RBP7.85□□□□□ -1.15
KRE28YDR532C Q0182Q9ZZW1 134 aa7.85□□□□□ -1.15
KRE28YDR532C YDR215CQ12240 137 aa7.84□□□□□ -1.15
KRE28YDR532C ACS2P52910 683 aaKnown RBP7.82□□□□□ -1.16
KRE28YDR532C SBP1P10080 294 aaKnown RBP7.81□□□□□ -1.16
KRE28YDR532C PHO87P25360 923 aa7.81□□□□□ -1.16
KRE28YDR532C NRD1P53617 575 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
KRE28YDR532C SLN1P39928 1220 aaPredicted RBP7.8□□□□□ -1.16
KRE28YDR532C KTR7P40504 517 aa7.8□□□□□ -1.16
KRE28YDR532C MDS3P53094 1487 aa7.8□□□□□ -1.16
KRE28YDR532C UBP1P25037 809 aa7.79□□□□□ -1.16
KRE28YDR532C UTP4Q06679 776 aaKnown RBP7.79□□□□□ -1.16
KRE28YDR532C XRN1P22147 1528 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms