RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W GLO3P38682 493 aaKnown RBP4.01□□□□□ -1.77
SIZ1YDR409W FYV10P40492 516 aa4.01□□□□□ -1.77
SIZ1YDR409W DNM1P54861 757 aa4.01□□□□□ -1.77
SIZ1YDR409W GPI13Q07830 1017 aa4.01□□□□□ -1.77
SIZ1YDR409W SUI2P20459 304 aaKnown RBP4□□□□□ -1.77
SIZ1YDR409W MNN4P36044 1178 aa4□□□□□ -1.77
SIZ1YDR409W TAF5P38129 798 aa4□□□□□ -1.77
SIZ1YDR409W YHL050CP38721 697 aa4□□□□□ -1.77
SIZ1YDR409W YHR219WP38900 624 aa4□□□□□ -1.77
SIZ1YDR409W SLN1P39928 1220 aaPredicted RBP4□□□□□ -1.77
SIZ1YDR409W BOI2P39969 1040 aa4□□□□□ -1.77
SIZ1YDR409W HGH1P48362 394 aaKnown RBP4□□□□□ -1.77
SIZ1YDR409W GRX3Q03835 250 aa4□□□□□ -1.77
SIZ1YDR409W YEL077CQ3E7X8 1277 aa4□□□□□ -1.77
SIZ1YDR409W EDE1P34216 1381 aa4□□□□□ -1.77
SIZ1YDR409W YRF1-1P0CX20 1796 aa4□□□□□ -1.77
SIZ1YDR409W YRF1-5P0CX21 1796 aa4□□□□□ -1.77
SIZ1YDR409W YRF1-8P0CX22 1796 aa4□□□□□ -1.77
SIZ1YDR409W MLP1Q02455 1875 aaKnown RBP4□□□□□ -1.77
SIZ1YDR409W PCT1P13259 424 aa4□□□□□ -1.77
SIZ1YDR409W VMA4P22203 233 aaKnown RBP4□□□□□ -1.77
SIZ1YDR409W SIS2P36024 562 aa4□□□□□ -1.77
SIZ1YDR409W ORC6P38826 435 aa4□□□□□ -1.77
SIZ1YDR409W BOL3P39724 118 aa4□□□□□ -1.77
SIZ1YDR409W KIP3P53086 805 aaKnown RBP4□□□□□ -1.77
SIZ1YDR409W ATF2P53296 535 aa4□□□□□ -1.77
SIZ1YDR409W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
SIZ1YDR409W PIF1P07271 859 aa3.99□□□□□ -1.77
SIZ1YDR409W TSR4P25040 408 aa3.99□□□□□ -1.77
SIZ1YDR409W MPE1P35728 441 aaKnown RBP3.99□□□□□ -1.77
SIZ1YDR409W SOL3P38858 249 aa3.99□□□□□ -1.77
SIZ1YDR409W NNF1P47149 201 aa3.99□□□□□ -1.77
SIZ1YDR409W TOS4Q06266 489 aa3.99□□□□□ -1.77
SIZ1YDR409W YDL121CQ07541 149 aa3.99□□□□□ -1.77
SIZ1YDR409W YDL144CQ07589 356 aa3.99□□□□□ -1.77
SIZ1YDR409W IML1P47170 1584 aa3.99□□□□□ -1.77
SIZ1YDR409W RAD2P07276 1031 aa3.99□□□□□ -1.77
SIZ1YDR409W GAP1P19145 602 aaPredicted RBP3.99□□□□□ -1.77
SIZ1YDR409W BOI1P38041 980 aaKnown RBP3.99□□□□□ -1.77
SIZ1YDR409W PPX1P38698 397 aa3.99□□□□□ -1.77
SIZ1YDR409W UBP12P39538 1254 aa3.99□□□□□ -1.77
SIZ1YDR409W RPS0BP46654 252 aaKnown RBP3.99□□□□□ -1.77
SIZ1YDR409W YJR142WP47173 342 aa3.99□□□□□ -1.77
SIZ1YDR409W ATG1P53104 897 aa3.99□□□□□ -1.77
SIZ1YDR409W ITT1Q04638 464 aa3.99□□□□□ -1.77
SIZ1YDR409W ESL2P36168 1195 aa3.98□□□□□ -1.77
SIZ1YDR409W FUI1P38196 639 aa3.98□□□□□ -1.77
SIZ1YDR409W IES5P40060 125 aa3.98□□□□□ -1.77
SIZ1YDR409W POL32P47110 350 aa3.98□□□□□ -1.77
SIZ1YDR409W SSA2P10592 639 aaKnown RBP3.98□□□□□ -1.77
SIZ1YDR409W KTR2P33550 425 aa3.98□□□□□ -1.77
SIZ1YDR409W PCS60P38137 543 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77 RIP-Chip
SIZ1YDR409W NIS1P53939 407 aa3.98□□□□□ -1.77
SIZ1YDR409W PSE1P32337 1089 aaKnown RBP3.97□□□□□ -1.77
SIZ1YDR409W SCT1P32784 759 aa3.97□□□□□ -1.77
SIZ1YDR409W SEC7P11075 2009 aaKnown RBP3.97□□□□□ -1.77
SIZ1YDR409W SSB1P11484 613 aaKnown RBP3.97□□□□□ -1.77
SIZ1YDR409W YEF3P16521 1044 aaKnown RBP3.97□□□□□ -1.77
SIZ1YDR409W MET1P36150 593 aa3.97□□□□□ -1.77
SIZ1YDR409W SSB2P40150 613 aaKnown RBP3.97□□□□□ -1.77
SIZ1YDR409W HOS4P40480 1083 aa3.97□□□□□ -1.77
SIZ1YDR409W OYE2Q03558 400 aaKnown RBP3.97□□□□□ -1.77
SIZ1YDR409W NUP188P52593 1655 aaKnown RBP3.97□□□□□ -1.77
SIZ1YDR409W NOT3P06102 836 aaKnown RBP3.96□□□□□ -1.78
SIZ1YDR409W MSP1P28737 362 aa3.96□□□□□ -1.78
SIZ1YDR409W PTC3P34221 468 aaKnown RBP3.96□□□□□ -1.78
SIZ1YDR409W MIF2P35201 549 aa3.96□□□□□ -1.78
SIZ1YDR409W STM1P39015 273 aaKnown RBP3.96□□□□□ -1.78
SIZ1YDR409W VAC8P39968 578 aa3.96□□□□□ -1.78
SIZ1YDR409W AIM21P40563 679 aa3.96□□□□□ -1.78
SIZ1YDR409W DJP1P40564 432 aa3.96□□□□□ -1.78
SIZ1YDR409W TGL2P54857 326 aa3.96□□□□□ -1.78
SIZ1YDR409W VPS16Q03308 798 aa3.96□□□□□ -1.78
SIZ1YDR409W BNR1P40450 1375 aa3.96□□□□□ -1.78
SIZ1YDR409W TRK1P12685 1235 aa3.96□□□□□ -1.78
SIZ1YDR409W VPS24P36095 224 aaKnown RBP3.96□□□□□ -1.78
SIZ1YDR409W PBP2P38151 413 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
SIZ1YDR409W YHR020WP38708 688 aaKnown RBP3.96□□□□□ -1.78
SIZ1YDR409W RPL34AP87262 121 aaPredicted RBP3.96□□□□□ -1.78
SIZ1YDR409W GIR2Q03768 265 aaPredicted RBP3.96□□□□□ -1.78
SIZ1YDR409W BDF2Q07442 638 aa3.96□□□□□ -1.78
SIZ1YDR409W LSP1Q12230 341 aaKnown RBP3.96□□□□□ -1.78
SIZ1YDR409W SCJ1P25303 377 aa3.95□□□□□ -1.78
SIZ1YDR409W YJU3P28321 313 aa3.95□□□□□ -1.78
SIZ1YDR409W RRP14P36080 434 aaKnown RBP3.95□□□□□ -1.78
SIZ1YDR409W FKH1P40466 484 aa3.95□□□□□ -1.78
SIZ1YDR409W FAF1P40546 346 aaPredicted RBP3.95□□□□□ -1.78
SIZ1YDR409W NSE3Q05541 303 aa3.95□□□□□ -1.78
SIZ1YDR409W TAF13P11747 167 aa3.95□□□□□ -1.78
SIZ1YDR409W RGR1P19263 1082 aa3.95□□□□□ -1.78
SIZ1YDR409W RAD59Q12223 238 aa3.95□□□□□ -1.78
SIZ1YDR409W DNF3Q12674 1656 aa3.95□□□□□ -1.78
SIZ1YDR409W SPE2P21182 396 aa3.94□□□□□ -1.78
SIZ1YDR409W VHR2P40041 505 aa3.94□□□□□ -1.78
SIZ1YDR409W MPP10P47083 593 aaKnown RBP3.94□□□□□ -1.78
SIZ1YDR409W SPR28Q04921 423 aa3.94□□□□□ -1.78
SIZ1YDR409W PSH1Q12161 406 aa3.94□□□□□ -1.78
SIZ1YDR409W KNS1P32350 737 aaPredicted RBP3.94□□□□□ -1.78
SIZ1YDR409W RKM3P38222 552 aa3.94□□□□□ -1.78
SIZ1YDR409W NUT2Q06213 157 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms